FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE5436, 344 aa
  1>>>pF1KE5436 344 - 344 aa - 344 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.1643+/-0.000617; mu= 17.9391+/- 0.038
 mean_var=69.8529+/-14.268, 0's: 0 Z-trim(112.2): 11  B-trim: 90 in 1/52
 Lambda= 0.153455
 statistics sampled from 12978 (12987) to 12978 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.746), E-opt: 0.2 (0.399), width:  16
 Scan time:  2.920

The best scores are:                                      opt bits E(32554)
CCDS54316.1 MBOAT7 gene_id:79143|Hs108|chr19       ( 344) 2369 532.8 1.5e-151
CCDS12883.1 MBOAT7 gene_id:79143|Hs108|chr19       ( 472) 2369 532.9  2e-151
CCDS54315.1 MBOAT7 gene_id:79143|Hs108|chr19       ( 399) 1621 367.3 1.2e-101


>>CCDS54316.1 MBOAT7 gene_id:79143|Hs108|chr19            (344 aa)
 initn: 2369 init1: 2369 opt: 2369  Z-score: 2834.1  bits: 532.8 E(32554): 1.5e-151
Smith-Waterman score: 2369; 99.7% identity (100.0% similar) in 344 aa overlap (1-344:1-344)

               10        20        30        40        50        60
pF1KE5 MSPEEWTYLVVLLISIPIGFLFKKAGPGLKRWGAAAVGLGLTLFTCGPHTLHSLVTILGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 MSPEEWTYLVVLLISIPIGFLFKKAGPGLKRWGAAAVGLGLTLFTCGPHTLHSLVTILGT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE5 WALIQAQPCSCHALALAWTFSYLLFFRALSLLGLPTPTPFTNAVQLLLTLKLVSLASEVQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 WALIQAQPCSCHALALAWTFSYLLFFRALSLLGLPTPTPFTNAVQLLLTLKLVSLASEVQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE5 DLHLAQRKEMASGFSKGPTLGLLPDVPSLMETLSYSYCYVGIMTGPFFRYRTYLDWLEQP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 DLHLAQRKEMASGFSKGPTLGLLPDVPSLMETLSYSYCYVGIMTGPFFRYRTYLDWLEQP
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE5 FPGAVPSLRPLLRRAWPAPLFGLLFLLSSHLFPLEAVREDAFYARPLPARLFYMIPVFFA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 FPGAVPSLRPLLRRAWPAPLFGLLFLLSSHLFPLEAVREDAFYARPLPARLFYMIPVFFA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE5 FRMRFYVAWIAAECGCIAAGLGAYPVAAKARAGGGPTLQCPPPSSPEKAASLEYDYETIR
       ::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::
CCDS54 FRMRFYVAWIAAECGCIAAGFGAYPVAAKARAGGGPTLQCPPPSSPEKAASLEYDYETIR
              250       260       270       280       290       300

              310       320       330       340    
pF1KE5 NIDCYSTDFCVRVRDGMRYWNMTVQWWLAQYIYKSAPARSYVLR
       ::::::::::::::::::::::::::::::::::::::::::::
CCDS54 NIDCYSTDFCVRVRDGMRYWNMTVQWWLAQYIYKSAPARSYVLR
              310       320       330       340    

>>CCDS12883.1 MBOAT7 gene_id:79143|Hs108|chr19            (472 aa)
 initn: 2369 init1: 2369 opt: 2369  Z-score: 2832.1  bits: 532.9 E(32554): 2e-151
Smith-Waterman score: 2369; 99.7% identity (100.0% similar) in 344 aa overlap (1-344:1-344)

               10        20        30        40        50        60
pF1KE5 MSPEEWTYLVVLLISIPIGFLFKKAGPGLKRWGAAAVGLGLTLFTCGPHTLHSLVTILGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 MSPEEWTYLVVLLISIPIGFLFKKAGPGLKRWGAAAVGLGLTLFTCGPHTLHSLVTILGT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE5 WALIQAQPCSCHALALAWTFSYLLFFRALSLLGLPTPTPFTNAVQLLLTLKLVSLASEVQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 WALIQAQPCSCHALALAWTFSYLLFFRALSLLGLPTPTPFTNAVQLLLTLKLVSLASEVQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE5 DLHLAQRKEMASGFSKGPTLGLLPDVPSLMETLSYSYCYVGIMTGPFFRYRTYLDWLEQP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 DLHLAQRKEMASGFSKGPTLGLLPDVPSLMETLSYSYCYVGIMTGPFFRYRTYLDWLEQP
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE5 FPGAVPSLRPLLRRAWPAPLFGLLFLLSSHLFPLEAVREDAFYARPLPARLFYMIPVFFA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 FPGAVPSLRPLLRRAWPAPLFGLLFLLSSHLFPLEAVREDAFYARPLPARLFYMIPVFFA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE5 FRMRFYVAWIAAECGCIAAGLGAYPVAAKARAGGGPTLQCPPPSSPEKAASLEYDYETIR
       ::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::
CCDS12 FRMRFYVAWIAAECGCIAAGFGAYPVAAKARAGGGPTLQCPPPSSPEKAASLEYDYETIR
              250       260       270       280       290       300

              310       320       330       340                    
pF1KE5 NIDCYSTDFCVRVRDGMRYWNMTVQWWLAQYIYKSAPARSYVLR                
       ::::::::::::::::::::::::::::::::::::::::::::                
CCDS12 NIDCYSTDFCVRVRDGMRYWNMTVQWWLAQYIYKSAPARSYVLRSAWTMLLSAYWHGLHP
              310       320       330       340       350       360

CCDS12 GYYLSFLTIPLCLAAEGRLESALRGRLSPGGQKAWDWVHWFLKMRAYDYMCMGFVLLSLA
              370       380       390       400       410       420

>>CCDS54315.1 MBOAT7 gene_id:79143|Hs108|chr19            (399 aa)
 initn: 1621 init1: 1621 opt: 1621  Z-score: 1938.2  bits: 367.3 E(32554): 1.2e-101
Smith-Waterman score: 1621; 99.6% identity (100.0% similar) in 233 aa overlap (112-344:39-271)

              90       100       110       120       130       140 
pF1KE5 YLLFFRALSLLGLPTPTPFTNAVQLLLTLKLVSLASEVQDLHLAQRKEMASGFSKGPTLG
                                     ::::::::::::::::::::::::::::::
CCDS54 GAHPVHLWPPHFAFSGHHPRDLGPHSGPALLVSLASEVQDLHLAQRKEMASGFSKGPTLG
       10        20        30        40        50        60        

             150       160       170       180       190       200 
pF1KE5 LLPDVPSLMETLSYSYCYVGIMTGPFFRYRTYLDWLEQPFPGAVPSLRPLLRRAWPAPLF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 LLPDVPSLMETLSYSYCYVGIMTGPFFRYRTYLDWLEQPFPGAVPSLRPLLRRAWPAPLF
       70        80        90       100       110       120        

             210       220       230       240       250       260 
pF1KE5 GLLFLLSSHLFPLEAVREDAFYARPLPARLFYMIPVFFAFRMRFYVAWIAAECGCIAAGL
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.
CCDS54 GLLFLLSSHLFPLEAVREDAFYARPLPARLFYMIPVFFAFRMRFYVAWIAAECGCIAAGF
      130       140       150       160       170       180        

             270       280       290       300       310       320 
pF1KE5 GAYPVAAKARAGGGPTLQCPPPSSPEKAASLEYDYETIRNIDCYSTDFCVRVRDGMRYWN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 GAYPVAAKARAGGGPTLQCPPPSSPEKAASLEYDYETIRNIDCYSTDFCVRVRDGMRYWN
      190       200       210       220       230       240        

             330       340                                         
pF1KE5 MTVQWWLAQYIYKSAPARSYVLR                                     
       :::::::::::::::::::::::                                     
CCDS54 MTVQWWLAQYIYKSAPARSYVLRSAWTMLLSAYWHGLHPGYYLSFLTIPLCLAAEGRLES
      250       260       270       280       290       300        




344 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Tue Nov  8 00:44:38 2016 done: Tue Nov  8 00:44:39 2016
 Total Scan time:  2.920 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]