################################## # NO CUT ENZYMES ( 105 enzymes) # ################################## AatII Acc65I AccIII AclI AcsI AflII AhdI Alw44I ApaLI ApoI AscI AseI AsnI Asp718I AspEI AvrII BbeI BcgI BciVI BfaI BfrI BglII BlnI BseAI BsiWI Bsp1407I BspDI BspEI BspLU11I BspMI BsrDI BsrGI BssSI Bst1107I BstAPI BstBI BstEII BstPI BstZ17I ClaI CpoI DraI DrdI Eam1105I EcoO65I EcoRI EcoRV EcoT22I FseI HincII HindII HindIII HpaI KasI KpnI KspI MaeI MaeIII MfeI MluI MroI MseI MunI NaeI NarI NdeI NgoMIV NheI NotI NruI NsiI NspI NspV PacI PaeR7I PmeI PpuMI PshBI Psp1406I PvuI PvuII RsrII SacII SalI SapI SbfI ScaI SexAI SfoI SfuI SgrAI SnaBI SpeI SphI Sse8387I SspBI SspI StuI SwaI TfiI Tru9I Tsp45I Tsp509I XbaI XhoI ################################### # ONE CUT ENZYMES ( 47 enzymes) # ################################### AccI 1165 GTCTAC GT^[AC][GT]AC AfaI 547 GTAC GT^AC AocI 735 CCTCAGG CC^T[ACGT]AGG Aor51HI 1020 AGCGCT AGC^GCT Asp700I 660 GAAGGTCTTC GAA[ACGT][ACGT]^[ACGT][ACGT]TTC AspI 96 GACGCCGTC GAC[ACGT]^[ACGT][ACGT]GTC AvaI 655 CCCGGG C^[CT]CG[GA]G AviII 1025 TGCGCA TGC^GCA BamHI 1325 GGATCC G^GATCC BbrPI 1103 CACGTG CAC^GTG BbsI 664 GTCTTC GAAGAC(2/6) BclI 185 TGATCA T^GATCA BglI 1339 GCCTTCCCGGC GCC[ACGT][ACGT][ACGT][ACGT]^[ACGT]GGC BlpI 243 GCTGAGC GC^T[ACGT]AGC Bpu1102I 243 GCTGAGC GC^T[ACGT]AGC BpuAI 664 GTCTTC GAAGAC(2/6) BsiEI 383 CGGCCG CG[GA][CT]^CG BsmFI 1265 GGGAC GGGAC(10/14) BsmI 760 GAATGC GAATGC(1/-1) BsoBI 655 CCCGGG C^[CT]CG[GA]G BspHI 1499 TCATGA T^CATGA BssHII 416 GCGCGC G^CGCGC Bsu36I 735 CCTCAGG CC^T[ACGT]AGG CelII 243 GCTGAGC GC^T[ACGT]AGC DraIII 1279 CACAGTGTG CAC[ACGT][ACGT][ACGT]^GTG EagI 383 CGGCCG C^GGCCG EclXI 383 CGGCCG C^GGCCG Eco47III 1020 AGCGCT AGC^GCT Eco52I 383 CGGCCG C^GGCCG Eco81I 735 CCTCAGG CC^T[ACGT]AGG FbaI 185 TGATCA T^GATCA FspI 1025 TGCGCA TGC^GCA MspA1I 241 CCGCTG C[AC]G^C[GT]G NcoI 89 CCATGG C^CATGG PflFI 96 GACGCCGTC GAC[ACGT]^[ACGT][ACGT]GTC PmaCI 1103 CACGTG CAC^GTG PmlI 1103 CACGTG CAC^GTG PshAI 856 GACAAGTGTC GAC[ACGT][ACGT]^[ACGT][ACGT]GTC RcaI 1499 TCATGA T^CATGA RsaI 547 GTAC GT^AC SfiI 1338 GGCCTTCCCGGCC GGCC[ACGT][ACGT][ACGT][ACGT]^[ACGT]GGCC SmaI 655 CCCGGG CCC^GGG SmlI 1390 CTCAAG C^T[CT][GA]AG Tth111I 96 GACGCCGTC GAC[ACGT]^[ACGT][ACGT]GTC XmaCI 655 CCCGGG C^CCGGG XmaI 655 CCCGGG C^CCGGG XmnI 660 GAAGGTCTTC GAA[ACGT][ACGT]^[ACGT][ACGT]TTC ################################### # TWO CUT ENZYMES ( 30 enzymes) # ################################### AcyI 96 GACGCC G[GA]^CG[CT]C 151 GACGCC AflIII 920 ACGTGT A^C[GA][CT]GT 1102 ACACGT AgeI 233 ACCGGT A^CCGGT 1441 ACCGGT ApaI 877 GGGCCC GGGCC^C 1530 GGGCCC BanI 142 GGTGCC G^G[CT][GA]CC 1272 GGTGCC BbvCI 1305 CCTCAGC CCTCAGC(-5/-2) 495 GCTGAGG BsaBI 180 GATCCTGATC GAT[ACGT][ACGT]^[ACGT][ACGT]ATC 1326 GATCCTCATC BsaHI 96 GACGCC G[GA]^CG[CT]C 151 GACGCC BsaI 565 GAGACC GGTCTC(1/5) 796 GAGACC BsgI 532 CTGCAC GTGCAG(16/14) 292 GTGCAG BsmBI 17 GAGACG CGTCTC(1/5) 94 GAGACG BsrBI 969 GAGCGG CCGCTC(-3/-3) 1320 GAGCGG BstYI 179 AGATCC [GA]^GATC[CT] 1325 GGATCC DsaI 89 CCATGG C^C[GA][CT]GG 1136 CCGTGG EcoNI 168 CCTGAAGAAGG CCT[ACGT][ACGT]^[ACGT][ACGT][ACGT]AGG 984 CCTGGAGAAGG EcoT14I 64 CCTTGG C^C[AT][AT]GG 89 CCATGG HaeII 352 AGCGCC [GA]GCGC^[CT] 1020 AGCGCT Hin1I 96 GACGCC G[GA]^CG[CT]C 151 GACGCC HinfI 69 GAGTC G^A[ACGT]TC 1183 GAGTC MamI 180 GATCCTGATC GAT[ACGT][ACGT]^[ACGT][ACGT]ATC 1326 GATCCTCATC MflI 179 AGATCC [GA]^GATC[CT] 1325 GGATCC PflMI 1056 CCACTCGCTGG CCA[ACGT][ACGT][ACGT][ACGT]^[ACGT]TGG 1293 CCAGATGGTGG PinAI 233 ACCGGT A^CCGGT 1441 ACCGGT PleI 69 GAGTC GAGTC(4/5) 1183 GAGTC PstI 403 CTGCAG CTGCA^G 1069 CTGCAG SfcI 403 CTGCAG C^T[GA][CT]AG 1069 CTGCAG StyI 64 CCTTGG C^C[AT][AT]GG 89 CCATGG Van91I 1056 CCACTCGCTGG CCA[ACGT][ACGT][ACGT][ACGT]^[ACGT]TGG 1293 CCAGATGGTGG XcmI 680 CCATCCTCTTCGTGG CCA[ACGT][ACGT][ACGT][ACGT][ACGT]^[ACGT][ACGT][ACGT][ACGT]TGG 1244 CCATGACAACGGTGG XhoII 179 AGATCC [GA]^GATC[CT] 1325 GGATCC ######################################### # 3 OR MORE CUT ENZYMES ( 76 enzymes) # ######################################### AccII AciI AluI AlwI AlwNI AspHI AvaII BalI BanII BbvI BcnI BmyI BpmI BsaAI BsaJI BsaWI BseRI BsiHKAI BsiYI BslI BsmAI Bsp1286I BsrFI BsrI BssKI BstF5I BstNI BstUI BstXI Cac8I CfoI Cfr10I Cfr13I DdeI DpnII DraII EaeI EarI EcoO109I EcoRII FauI Fnu4HI FokI HaeIII HapII HgaI HhaI HinP1I HpaII HphI ItaI Ksp632I MaeII MboI MboII MluNI MnlI MscI MslI MspI MvaI MvnI MwoI NciI NdeII NlaIII NlaIV SacI Sau3AI Sau96I ScrFI SfaNI TaqI TseI TspRI TthHB8I