FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5184, 72 aa 1>>>pF1KE5184 72 - 72 aa - 72 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.8351+/-0.000611; mu= 8.0382+/- 0.037 mean_var=40.3399+/- 8.098, 0's: 0 Z-trim(107.9): 14 B-trim: 0 in 0/51 Lambda= 0.201933 statistics sampled from 9835 (9847) to 9835 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.732), E-opt: 0.2 (0.302), width: 16 Scan time: 1.270 The best scores are: opt bits E(32554) CCDS73496.1 BEST3 gene_id:144453|Hs108|chr12 ( 72) 460 140.5 8.3e-35 CCDS61193.1 BEST3 gene_id:144453|Hs108|chr12 ( 398) 340 105.6 1.5e-23 CCDS61192.1 BEST3 gene_id:144453|Hs108|chr12 ( 562) 340 105.7 2.1e-23 CCDS8992.2 BEST3 gene_id:144453|Hs108|chr12 ( 668) 340 105.7 2.4e-23 CCDS514.1 BEST4 gene_id:266675|Hs108|chr1 ( 473) 248 78.8 2e-15 CCDS42506.1 BEST2 gene_id:54831|Hs108|chr19 ( 509) 248 78.8 2.2e-15 CCDS31580.1 BEST1 gene_id:7439|Hs108|chr11 ( 585) 232 74.2 6.4e-14 CCDS44623.1 BEST1 gene_id:7439|Hs108|chr11 ( 604) 232 74.2 6.6e-14 >>CCDS73496.1 BEST3 gene_id:144453|Hs108|chr12 (72 aa) initn: 460 init1: 460 opt: 460 Z-score: 738.4 bits: 140.5 E(32554): 8.3e-35 Smith-Waterman score: 460; 100.0% identity (100.0% similar) in 72 aa overlap (1-72:1-72) 10 20 30 40 50 60 pF1KE5 MFLISSSVHGSDEHGRLLRRTLMRYVNLTSLLIFRSVSTAVYKRFPTMDHVVEAERTGMK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 MFLISSSVHGSDEHGRLLRRTLMRYVNLTSLLIFRSVSTAVYKRFPTMDHVVEAERTGMK 10 20 30 40 50 60 70 pF1KE5 PILPSSFEMQSF :::::::::::: CCDS73 PILPSSFEMQSF 70 >>CCDS61193.1 BEST3 gene_id:144453|Hs108|chr12 (398 aa) initn: 340 init1: 340 opt: 340 Z-score: 536.4 bits: 105.6 E(32554): 1.5e-23 Smith-Waterman score: 340; 100.0% identity (100.0% similar) in 54 aa overlap (1-54:107-160) 10 20 30 pF1KE5 MFLISSSVHGSDEHGRLLRRTLMRYVNLTS :::::::::::::::::::::::::::::: CCDS61 PVTFVLGFYVTLVVNRWWNQFVNLPWPDRLMFLISSSVHGSDEHGRLLRRTLMRYVNLTS 80 90 100 110 120 130 40 50 60 70 pF1KE5 LLIFRSVSTAVYKRFPTMDHVVEAERTGMKPILPSSFEMQSF :::::::::::::::::::::::: CCDS61 LLIFRSVSTAVYKRFPTMDHVVEAGFMTTDERKLFNHLKSPHLKYWVPFIWFGNLATKAR 140 150 160 170 180 190 >>CCDS61192.1 BEST3 gene_id:144453|Hs108|chr12 (562 aa) initn: 340 init1: 340 opt: 340 Z-score: 533.8 bits: 105.7 E(32554): 2.1e-23 Smith-Waterman score: 340; 100.0% identity (100.0% similar) in 54 aa overlap (1-54:1-54) 10 20 30 40 50 60 pF1KE5 MFLISSSVHGSDEHGRLLRRTLMRYVNLTSLLIFRSVSTAVYKRFPTMDHVVEAERTGMK :::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 MFLISSSVHGSDEHGRLLRRTLMRYVNLTSLLIFRSVSTAVYKRFPTMDHVVEAGFMTTD 10 20 30 40 50 60 70 pF1KE5 PILPSSFEMQSF CCDS61 ERKLFNHLKSPHLKYWVPFIWFGNLATKARNEGRIRDSVDLQSLMTEMNRYRSWCSLLFG 70 80 90 100 110 120 >>CCDS8992.2 BEST3 gene_id:144453|Hs108|chr12 (668 aa) initn: 340 init1: 340 opt: 340 Z-score: 532.5 bits: 105.7 E(32554): 2.4e-23 Smith-Waterman score: 340; 100.0% identity (100.0% similar) in 54 aa overlap (1-54:107-160) 10 20 30 pF1KE5 MFLISSSVHGSDEHGRLLRRTLMRYVNLTS :::::::::::::::::::::::::::::: CCDS89 PVTFVLGFYVTLVVNRWWNQFVNLPWPDRLMFLISSSVHGSDEHGRLLRRTLMRYVNLTS 80 90 100 110 120 130 40 50 60 70 pF1KE5 LLIFRSVSTAVYKRFPTMDHVVEAERTGMKPILPSSFEMQSF :::::::::::::::::::::::: CCDS89 LLIFRSVSTAVYKRFPTMDHVVEAGFMTTDERKLFNHLKSPHLKYWVPFIWFGNLATKAR 140 150 160 170 180 190 >>CCDS514.1 BEST4 gene_id:266675|Hs108|chr1 (473 aa) initn: 258 init1: 242 opt: 248 Z-score: 390.2 bits: 78.8 E(32554): 2e-15 Smith-Waterman score: 248; 70.4% identity (92.6% similar) in 54 aa overlap (1-54:107-160) 10 20 30 pF1KE5 MFLISSSVHGSDEHGRLLRRTLMRYVNLTS : .::.:::: :..::::::::.::.::.: CCDS51 PLSFVLGFYVTLVVNRWWSQYTSIPLPDQLMCVISASVHGVDQRGRLLRRTLIRYANLAS 80 90 100 110 120 130 40 50 60 70 pF1KE5 LLIFRSVSTAVYKRFPTMDHVVEAERTGMKPILPSSFEMQSF .:..::::: : ::::::.:::.: CCDS51 VLVLRSVSTRVLKRFPTMEHVVDAGFMSQEERKKFESLKSDFNKYWVPCVWFTNLAAQAR 140 150 160 170 180 190 >>CCDS42506.1 BEST2 gene_id:54831|Hs108|chr19 (509 aa) initn: 248 init1: 248 opt: 248 Z-score: 389.7 bits: 78.8 E(32554): 2.2e-15 Smith-Waterman score: 248; 66.7% identity (94.4% similar) in 54 aa overlap (1-54:107-160) 10 20 30 pF1KE5 MFLISSSVHGSDEHGRLLRRTLMRYVNLTS : .....::: :..::: :::::::..:.. CCDS42 PVSFVLGFYVTLVVNRWWSQYLCMPLPDALMCVVAGTVHGRDDRGRLYRRTLMRYAGLSA 80 90 100 110 120 130 40 50 60 70 pF1KE5 LLIFRSVSTAVYKRFPTMDHVVEAERTGMKPILPSSFEMQSF .::.:::::::.:::::.:::::: CCDS42 VLILRSVSTAVFKRFPTIDHVVEAGFMTREERKKFENLNSSYNKYWVPCVWFSNLAAQAR 140 150 160 170 180 190 >>CCDS31580.1 BEST1 gene_id:7439|Hs108|chr11 (585 aa) initn: 204 init1: 204 opt: 232 Z-score: 363.4 bits: 74.2 E(32554): 6.4e-14 Smith-Waterman score: 232; 66.7% identity (92.6% similar) in 54 aa overlap (1-54:107-160) 10 20 30 pF1KE5 MFLISSSVHGSDEHGRLLRRTLMRYVNLTS : :.:. :.:.::.::::::::.::.:: . CCDS31 PISFVLGFYVTLVVTRWWNQYENLPWPDRLMSLVSGFVEGKDEQGRLLRRTLIRYANLGN 80 90 100 110 120 130 40 50 60 70 pF1KE5 LLIFRSVSTAVYKRFPTMDHVVEAERTGMKPILPSSFEMQSF .::.::::::::::::. .:.:.: CCDS31 VLILRSVSTAVYKRFPSAQHLVQAGFMTPAEHKQLEKLSLPHNMFWVPWVWFANLSMKAW 140 150 160 170 180 190 >>CCDS44623.1 BEST1 gene_id:7439|Hs108|chr11 (604 aa) initn: 204 init1: 204 opt: 232 Z-score: 363.2 bits: 74.2 E(32554): 6.6e-14 Smith-Waterman score: 232; 66.7% identity (92.6% similar) in 54 aa overlap (1-54:47-100) 10 20 30 pF1KE5 MFLISSSVHGSDEHGRLLRRTLMRYVNLTS : :.:. :.:.::.::::::::.::.:: . CCDS44 PISFVLGFYVTLVVTRWWNQYENLPWPDRLMSLVSGFVEGKDEQGRLLRRTLIRYANLGN 20 30 40 50 60 70 40 50 60 70 pF1KE5 LLIFRSVSTAVYKRFPTMDHVVEAERTGMKPILPSSFEMQSF .::.::::::::::::. .:.:.: CCDS44 VLILRSVSTAVYKRFPSAQHLVQAGFMTPAEHKQLEKLSLPHNMFWVPWVWFANLSMKAW 80 90 100 110 120 130 72 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 22:22:49 2016 done: Mon Nov 7 22:22:50 2016 Total Scan time: 1.270 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]