FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5663, 519 aa 1>>>pF1KE5663 519 - 519 aa - 519 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.8585+/-0.00103; mu= 14.5534+/- 0.061 mean_var=65.1860+/-12.779, 0's: 0 Z-trim(102.8): 28 B-trim: 0 in 0/49 Lambda= 0.158854 statistics sampled from 7103 (7108) to 7103 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.587), E-opt: 0.2 (0.218), width: 16 Scan time: 2.990 The best scores are: opt bits E(32554) CCDS3422.1 LAP3 gene_id:51056|Hs108|chr4 ( 519) 3410 790.8 0 CCDS56201.1 NPEPL1 gene_id:79716|Hs108|chr20 ( 475) 470 117.0 4.7e-26 CCDS56200.1 NPEPL1 gene_id:79716|Hs108|chr20 ( 495) 470 117.0 4.9e-26 CCDS46621.1 NPEPL1 gene_id:79716|Hs108|chr20 ( 523) 470 117.1 5.1e-26 >>CCDS3422.1 LAP3 gene_id:51056|Hs108|chr4 (519 aa) initn: 3410 init1: 3410 opt: 3410 Z-score: 4222.0 bits: 790.8 E(32554): 0 Smith-Waterman score: 3410; 100.0% identity (100.0% similar) in 519 aa overlap (1-519:1-519) 10 20 30 40 50 60 pF1KE5 MFLLPLPAAGRVVVRRLAVRRFGSRSLSTADMTKGLVLGIYSKEKEDDVPQFTSAGENFD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 MFLLPLPAAGRVVVRRLAVRRFGSRSLSTADMTKGLVLGIYSKEKEDDVPQFTSAGENFD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 KLLAGKLRETLNISGPPLKAGKTRTFYGLHQDFPSVVLVGLGKKAAGIDEQENWHEGKEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 KLLAGKLRETLNISGPPLKAGKTRTFYGLHQDFPSVVLVGLGKKAAGIDEQENWHEGKEN 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 IRAAVAAGCRQIQDLELSSVEVDPCGDAQAAAEGAVLGLYEYDDLKQKKKMAVSAKLYGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 IRAAVAAGCRQIQDLELSSVEVDPCGDAQAAAEGAVLGLYEYDDLKQKKKMAVSAKLYGS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 GDQEAWQKGVLFASGQNLARQLMETPANEMTPTRFAEIIEKNLKSASSKTEVHIRPKSWI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 GDQEAWQKGVLFASGQNLARQLMETPANEMTPTRFAEIIEKNLKSASSKTEVHIRPKSWI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 EEQAMGSFLSVAKGSDEPPVFLEIHYKGSPNANEPPLVFVGKGITFDSGGISIKASANMD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 EEQAMGSFLSVAKGSDEPPVFLEIHYKGSPNANEPPLVFVGKGITFDSGGISIKASANMD 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 LMRADMGGAATICSAIVSAAKLNLPINIIGLAPLCENMPSGKANKPGDVVRAKNGKTIQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 LMRADMGGAATICSAIVSAAKLNLPINIIGLAPLCENMPSGKANKPGDVVRAKNGKTIQV 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 DNTDAEGRLILADALCYAHTFNPKVILNAATLTGAMDVALGSGATGVFTNSSWLWNKLFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 DNTDAEGRLILADALCYAHTFNPKVILNAATLTGAMDVALGSGATGVFTNSSWLWNKLFE 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 ASIETGDRVWRMPLFEHYTRQVVDCQLADVNNIGKYRSAGACTAAAFLKEFVTHPKWAHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 ASIETGDRVWRMPLFEHYTRQVVDCQLADVNNIGKYRSAGACTAAAFLKEFVTHPKWAHL 430 440 450 460 470 480 490 500 510 pF1KE5 DIAGVMTNKDEVPYLRKGMTGRPTRTLIEFLLRFSQDNA ::::::::::::::::::::::::::::::::::::::: CCDS34 DIAGVMTNKDEVPYLRKGMTGRPTRTLIEFLLRFSQDNA 490 500 510 >>CCDS56201.1 NPEPL1 gene_id:79716|Hs108|chr20 (475 aa) initn: 448 init1: 289 opt: 470 Z-score: 581.2 bits: 117.0 E(32554): 4.7e-26 Smith-Waterman score: 470; 34.1% identity (63.9% similar) in 302 aa overlap (195-483:129-418) 170 180 190 200 210 220 pF1KE5 LKQKKKMAVSAKLYGSGDQEAWQKGVLFASGQNLARQLMETPANEMTPTRFAEIIEKNLK : :: ....:: :::. : : :.: : CCDS56 KTVTVEFFLVGQDNGPVEVSTLQCLANATDGVRLAARIVDTPCNEMNTDTFLEEINKVGK 100 110 120 130 140 150 230 240 250 260 270 280 pF1KE5 SASSKTEVHIRPKSWIEEQAMGSFLSVAKGSDEPPVFLEIHYKGSPNANEPPLVFVGKGI . . :: . .. ...:.. .:.:.. .::.. . . .:.. ...::::: CCDS56 ELGIIPTI-IRDEE-LKTRGFGGIYGVGKAALHPPALAVLSH--TPDGATQTIAWVGKGI 160 170 180 190 200 210 290 300 310 320 330 340 pF1KE5 TFDSGGISIKASANMDLMRADMGGAATICSAIVSAAKLNLPINIIGLAPLCENMPSGKAN ..:.::.:::....: :. : ::::.. .:. .: : .. :. .. : :: . .:. CCDS56 VYDTGGLSIKGKTTMPGMKRDCGGAAAVLGAFRAAIKQGFKDNLHAVFCLAENSVGPNAT 220 230 240 250 260 270 350 360 370 380 390 400 pF1KE5 KPGDVVRAKNGKTIQVDNTDAEGRLILADALCYA-HTFNPKVILNAATLTGAMDVALGSG .: :. .:::....::::::::.:::.. :: . .. .::. ::::::. .: :. CCDS56 RPDDIHLLYSGKTVEINNTDAEGRLVLADGVSYACKDLGADIILDMATLTGAQGIATGKY 280 290 300 310 320 330 410 420 430 440 450 pF1KE5 ATGVFTNSSWLWNKLFEASIETGDRVWRMPL-------FEHYTRQVVDCQ--LADVNNIG ..:.:::. .:. . :: : :: : ..: :.: . .:: .: CCDS56 HAAVLTNSAEWEAACVKAGRKCGDLV--HPLVYCPELHFSEFTSAVADMKNSVADRDN-- 340 350 360 370 380 390 460 470 480 490 500 510 pF1KE5 KYRSAGACTAAAFLKEFVTH--PK-WAHLDIAGVMTNKDEVPYLRKGMTGRPTRTLIEFL : ..: :. :. . : :.::::: CCDS56 ---SPSSC-AGLFIASHIGFDWPGVWVHLDIAAPVHAGERATGFGVALLLALFGRASEDP 400 410 420 430 440 pF1KE5 LRFSQDNA CCDS56 LLNLVSPLGCEVDVEEGDLGRDSKRRRLV 450 460 470 >>CCDS56200.1 NPEPL1 gene_id:79716|Hs108|chr20 (495 aa) initn: 448 init1: 289 opt: 470 Z-score: 580.9 bits: 117.0 E(32554): 4.9e-26 Smith-Waterman score: 470; 34.1% identity (63.9% similar) in 302 aa overlap (195-483:149-438) 170 180 190 200 210 220 pF1KE5 LKQKKKMAVSAKLYGSGDQEAWQKGVLFASGQNLARQLMETPANEMTPTRFAEIIEKNLK : :: ....:: :::. : : :.: : CCDS56 KTVTVEFFLVGQDNGPVEVSTLQCLANATDGVRLAARIVDTPCNEMNTDTFLEEINKVGK 120 130 140 150 160 170 230 240 250 260 270 280 pF1KE5 SASSKTEVHIRPKSWIEEQAMGSFLSVAKGSDEPPVFLEIHYKGSPNANEPPLVFVGKGI . . :: . .. ...:.. .:.:.. .::.. . . .:.. ...::::: CCDS56 ELGIIPTI-IRDEE-LKTRGFGGIYGVGKAALHPPALAVLSH--TPDGATQTIAWVGKGI 180 190 200 210 220 230 290 300 310 320 330 340 pF1KE5 TFDSGGISIKASANMDLMRADMGGAATICSAIVSAAKLNLPINIIGLAPLCENMPSGKAN ..:.::.:::....: :. : ::::.. .:. .: : .. :. .. : :: . .:. CCDS56 VYDTGGLSIKGKTTMPGMKRDCGGAAAVLGAFRAAIKQGFKDNLHAVFCLAENSVGPNAT 240 250 260 270 280 290 350 360 370 380 390 400 pF1KE5 KPGDVVRAKNGKTIQVDNTDAEGRLILADALCYA-HTFNPKVILNAATLTGAMDVALGSG .: :. .:::....::::::::.:::.. :: . .. .::. ::::::. .: :. CCDS56 RPDDIHLLYSGKTVEINNTDAEGRLVLADGVSYACKDLGADIILDMATLTGAQGIATGKY 300 310 320 330 340 350 410 420 430 440 450 pF1KE5 ATGVFTNSSWLWNKLFEASIETGDRVWRMPL-------FEHYTRQVVDCQ--LADVNNIG ..:.:::. .:. . :: : :: : ..: :.: . .:: .: CCDS56 HAAVLTNSAEWEAACVKAGRKCGDLV--HPLVYCPELHFSEFTSAVADMKNSVADRDN-- 360 370 380 390 400 410 460 470 480 490 500 510 pF1KE5 KYRSAGACTAAAFLKEFVTH--PK-WAHLDIAGVMTNKDEVPYLRKGMTGRPTRTLIEFL : ..: :. :. . : :.::::: CCDS56 ---SPSSC-AGLFIASHIGFDWPGVWVHLDIAAPVHAGERATGFGVALLLALFGRASEDP 420 430 440 450 460 pF1KE5 LRFSQDNA CCDS56 LLNLVSPLGCEVDVEEGDLGRDSKRRRLV 470 480 490 >>CCDS46621.1 NPEPL1 gene_id:79716|Hs108|chr20 (523 aa) initn: 448 init1: 289 opt: 470 Z-score: 580.5 bits: 117.1 E(32554): 5.1e-26 Smith-Waterman score: 470; 34.1% identity (63.9% similar) in 302 aa overlap (195-483:177-466) 170 180 190 200 210 220 pF1KE5 LKQKKKMAVSAKLYGSGDQEAWQKGVLFASGQNLARQLMETPANEMTPTRFAEIIEKNLK : :: ....:: :::. : : :.: : CCDS46 KTVTVEFFLVGQDNGPVEVSTLQCLANATDGVRLAARIVDTPCNEMNTDTFLEEINKVGK 150 160 170 180 190 200 230 240 250 260 270 280 pF1KE5 SASSKTEVHIRPKSWIEEQAMGSFLSVAKGSDEPPVFLEIHYKGSPNANEPPLVFVGKGI . . :: . .. ...:.. .:.:.. .::.. . . .:.. ...::::: CCDS46 ELGIIPTI-IRDEE-LKTRGFGGIYGVGKAALHPPALAVLSH--TPDGATQTIAWVGKGI 210 220 230 240 250 260 290 300 310 320 330 340 pF1KE5 TFDSGGISIKASANMDLMRADMGGAATICSAIVSAAKLNLPINIIGLAPLCENMPSGKAN ..:.::.:::....: :. : ::::.. .:. .: : .. :. .. : :: . .:. CCDS46 VYDTGGLSIKGKTTMPGMKRDCGGAAAVLGAFRAAIKQGFKDNLHAVFCLAENSVGPNAT 270 280 290 300 310 320 350 360 370 380 390 400 pF1KE5 KPGDVVRAKNGKTIQVDNTDAEGRLILADALCYA-HTFNPKVILNAATLTGAMDVALGSG .: :. .:::....::::::::.:::.. :: . .. .::. ::::::. .: :. CCDS46 RPDDIHLLYSGKTVEINNTDAEGRLVLADGVSYACKDLGADIILDMATLTGAQGIATGKY 330 340 350 360 370 380 410 420 430 440 450 pF1KE5 ATGVFTNSSWLWNKLFEASIETGDRVWRMPL-------FEHYTRQVVDCQ--LADVNNIG ..:.:::. .:. . :: : :: : ..: :.: . .:: .: CCDS46 HAAVLTNSAEWEAACVKAGRKCGDLV--HPLVYCPELHFSEFTSAVADMKNSVADRDN-- 390 400 410 420 430 460 470 480 490 500 510 pF1KE5 KYRSAGACTAAAFLKEFVTH--PK-WAHLDIAGVMTNKDEVPYLRKGMTGRPTRTLIEFL : ..: :. :. . : :.::::: CCDS46 ---SPSSC-AGLFIASHIGFDWPGVWVHLDIAAPVHAGERATGFGVALLLALFGRASEDP 440 450 460 470 480 490 pF1KE5 LRFSQDNA CCDS46 LLNLVSPLGCEVDVEEGDLGRDSKRRRLV 500 510 520 519 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 05:39:15 2016 done: Tue Nov 8 05:39:15 2016 Total Scan time: 2.990 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]