FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6271, 182 aa 1>>>pF1KE6271 182 - 182 aa - 182 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.0283+/-0.000922; mu= 13.7889+/- 0.055 mean_var=59.4141+/-12.186, 0's: 0 Z-trim(104.2): 58 B-trim: 7 in 1/46 Lambda= 0.166391 statistics sampled from 7712 (7770) to 7712 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.626), E-opt: 0.2 (0.239), width: 16 Scan time: 1.470 The best scores are: opt bits E(32554) CCDS55225.1 ADAM18 gene_id:8749|Hs108|chr8 ( 182) 1206 297.8 2.4e-81 CCDS83287.1 ADAM18 gene_id:8749|Hs108|chr8 ( 715) 1168 289.0 4.2e-78 CCDS6113.1 ADAM18 gene_id:8749|Hs108|chr8 ( 739) 1168 289.0 4.3e-78 CCDS64883.1 ADAM2 gene_id:2515|Hs108|chr8 ( 672) 486 125.3 7.6e-29 CCDS64882.1 ADAM2 gene_id:2515|Hs108|chr8 ( 716) 486 125.3 8e-29 CCDS34884.1 ADAM2 gene_id:2515|Hs108|chr8 ( 735) 486 125.3 8.2e-29 CCDS47846.1 ADAM32 gene_id:203102|Hs108|chr8 ( 787) 473 122.2 7.6e-28 CCDS83286.1 ADAM32 gene_id:203102|Hs108|chr8 ( 688) 404 105.6 6.5e-23 CCDS6112.1 ADAM9 gene_id:8754|Hs108|chr8 ( 819) 344 91.3 1.6e-18 CCDS907.1 ADAM30 gene_id:11085|Hs108|chr1 ( 790) 258 70.6 2.6e-12 CCDS3823.1 ADAM29 gene_id:11086|Hs108|chr4 ( 820) 254 69.7 5.2e-12 CCDS32111.1 ADAM20 gene_id:8748|Hs108|chr14 ( 776) 247 68.0 1.6e-11 >>CCDS55225.1 ADAM18 gene_id:8749|Hs108|chr8 (182 aa) initn: 1206 init1: 1206 opt: 1206 Z-score: 1573.9 bits: 297.8 E(32554): 2.4e-81 Smith-Waterman score: 1206; 100.0% identity (100.0% similar) in 182 aa overlap (1-182:1-182) 10 20 30 40 50 60 pF1KE6 MFLLLALLTELGRLQAHEGSEGIFLHVTVPRKIKSNDSEVSERKMIYIITIDGQPYTLHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 MFLLLALLTELGRLQAHEGSEGIFLHVTVPRKIKSNDSEVSERKMIYIITIDGQPYTLHL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 GKQSFLPQNFLVYTYNETGSLHSVSPYFMMHCHYQGYAAEFPNSFVTLSICSGLRGFLQF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 GKQSFLPQNFLVYTYNETGSLHSVSPYFMMHCHYQGYAAEFPNSFVTLSICSGLRGFLQF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 ENISYGIEPVESSARFEHIIYQMKNNDPNVSILAVNYSHIWQKDQPYKVPLNSQVTVIIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 ENISYGIEPVESSARFEHIIYQMKNNDPNVSILAVNYSHIWQKDQPYKVPLNSQVTVIIL 130 140 150 160 170 180 pF1KE6 ML :: CCDS55 ML >>CCDS83287.1 ADAM18 gene_id:8749|Hs108|chr8 (715 aa) initn: 1189 init1: 1168 opt: 1168 Z-score: 1515.7 bits: 289.0 E(32554): 4.2e-78 Smith-Waterman score: 1168; 99.4% identity (100.0% similar) in 175 aa overlap (1-175:1-175) 10 20 30 40 50 60 pF1KE6 MFLLLALLTELGRLQAHEGSEGIFLHVTVPRKIKSNDSEVSERKMIYIITIDGQPYTLHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 MFLLLALLTELGRLQAHEGSEGIFLHVTVPRKIKSNDSEVSERKMIYIITIDGQPYTLHL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 GKQSFLPQNFLVYTYNETGSLHSVSPYFMMHCHYQGYAAEFPNSFVTLSICSGLRGFLQF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 GKQSFLPQNFLVYTYNETGSLHSVSPYFMMHCHYQGYAAEFPNSFVTLSICSGLRGFLQF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 ENISYGIEPVESSARFEHIIYQMKNNDPNVSILAVNYSHIWQKDQPYKVPLNSQVTVIIL ::::::::::::::::::::::::::::::::::::::::::::::::::::::. CCDS83 ENISYGIEPVESSARFEHIIYQMKNNDPNVSILAVNYSHIWQKDQPYKVPLNSQIKNLSK 130 140 150 160 170 180 pF1KE6 ML CCDS83 LLPQYLEIYIIVEKALMFTQFKLTVILSSLELWSNENQISTSGDADDILQRFLAWKRDYL 190 200 210 220 230 240 >>CCDS6113.1 ADAM18 gene_id:8749|Hs108|chr8 (739 aa) initn: 1189 init1: 1168 opt: 1168 Z-score: 1515.5 bits: 289.0 E(32554): 4.3e-78 Smith-Waterman score: 1168; 99.4% identity (100.0% similar) in 175 aa overlap (1-175:1-175) 10 20 30 40 50 60 pF1KE6 MFLLLALLTELGRLQAHEGSEGIFLHVTVPRKIKSNDSEVSERKMIYIITIDGQPYTLHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 MFLLLALLTELGRLQAHEGSEGIFLHVTVPRKIKSNDSEVSERKMIYIITIDGQPYTLHL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 GKQSFLPQNFLVYTYNETGSLHSVSPYFMMHCHYQGYAAEFPNSFVTLSICSGLRGFLQF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 GKQSFLPQNFLVYTYNETGSLHSVSPYFMMHCHYQGYAAEFPNSFVTLSICSGLRGFLQF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 ENISYGIEPVESSARFEHIIYQMKNNDPNVSILAVNYSHIWQKDQPYKVPLNSQVTVIIL ::::::::::::::::::::::::::::::::::::::::::::::::::::::. CCDS61 ENISYGIEPVESSARFEHIIYQMKNNDPNVSILAVNYSHIWQKDQPYKVPLNSQIKNLSK 130 140 150 160 170 180 pF1KE6 ML CCDS61 LLPQYLEIYIIVEKALYDYMGSEMMAVTQKIVQVIGLVNTMFTQFKLTVILSSLELWSNE 190 200 210 220 230 240 >>CCDS64883.1 ADAM2 gene_id:2515|Hs108|chr8 (672 aa) initn: 468 init1: 468 opt: 486 Z-score: 631.3 bits: 125.3 E(32554): 7.6e-29 Smith-Waterman score: 486; 45.0% identity (74.0% similar) in 169 aa overlap (1-169:1-167) 10 20 30 40 50 60 pF1KE6 MFLLLALLTELGRLQAHEGSEGIFLHVTVPRKIKSNDSEVSERKMIYIITIDGQPYTLHL :. .: ::. :: :. . ... ...:::.::.: .: : . : :.:.:.:::..: CCDS64 MWRVLFLLSGLGGLRMDSNFDSLPVQITVPEKIRSIIKEGIESQASYKIVIEGKPYTVNL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 GKQSFLPQNFLVYTYNETGSLHSVSPYFMMHCHYQGYAAEFPNSFVTLSICSGLRGFLQF ...:::.:: ::.:. :: .. .. :. :::::: .:.: : .: :.:::: ::: CCDS64 MQKNFLPHNFRVYSYSGTGIMKPLDQDFQNFCHYQGYIEGYPKSVVMVSTCTGLRGVLQF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 ENISYGIEPVESSARFEHIIYQMKNNDPNVSILAVNYSHIWQKDQPYKVPLNSQVTVIIL ::.::::::.:::. :::.:::.:.. .::. : . : ..: .:. CCDS64 ENVSYGIEPLESSVGFEHVIYQVKHKKADVSLY--NEKDIESRDLSFKLQSVEPQQDFAK 130 140 150 160 170 pF1KE6 ML CCDS64 YIEMHVIVEKQLYNHMGSDTTVVAQKVFQLIGLTNAIFVSFNITIILSSLELWIDENKIA 180 190 200 210 220 230 >>CCDS64882.1 ADAM2 gene_id:2515|Hs108|chr8 (716 aa) initn: 468 init1: 468 opt: 486 Z-score: 630.9 bits: 125.3 E(32554): 8e-29 Smith-Waterman score: 486; 45.0% identity (74.0% similar) in 169 aa overlap (1-169:1-167) 10 20 30 40 50 60 pF1KE6 MFLLLALLTELGRLQAHEGSEGIFLHVTVPRKIKSNDSEVSERKMIYIITIDGQPYTLHL :. .: ::. :: :. . ... ...:::.::.: .: : . : :.:.:.:::..: CCDS64 MWRVLFLLSGLGGLRMDSNFDSLPVQITVPEKIRSIIKEGIESQASYKIVIEGKPYTVNL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 GKQSFLPQNFLVYTYNETGSLHSVSPYFMMHCHYQGYAAEFPNSFVTLSICSGLRGFLQF ...:::.:: ::.:. :: .. .. :. :::::: .:.: : .: :.:::: ::: CCDS64 MQKNFLPHNFRVYSYSGTGIMKPLDQDFQNFCHYQGYIEGYPKSVVMVSTCTGLRGVLQF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 ENISYGIEPVESSARFEHIIYQMKNNDPNVSILAVNYSHIWQKDQPYKVPLNSQVTVIIL ::.::::::.:::. :::.:::.:.. .::. : . : ..: .:. CCDS64 ENVSYGIEPLESSVGFEHVIYQVKHKKADVSLY--NEKDIESRDLSFKLQSVEYNHMGSD 130 140 150 160 170 pF1KE6 ML CCDS64 TTVVAQKVFQLIGLTNAIFVSFNITIILSSLELWIDENKIATTGEANELLHTFLRWKTSY 180 190 200 210 220 230 >>CCDS34884.1 ADAM2 gene_id:2515|Hs108|chr8 (735 aa) initn: 468 init1: 468 opt: 486 Z-score: 630.7 bits: 125.3 E(32554): 8.2e-29 Smith-Waterman score: 486; 45.0% identity (74.0% similar) in 169 aa overlap (1-169:1-167) 10 20 30 40 50 60 pF1KE6 MFLLLALLTELGRLQAHEGSEGIFLHVTVPRKIKSNDSEVSERKMIYIITIDGQPYTLHL :. .: ::. :: :. . ... ...:::.::.: .: : . : :.:.:.:::..: CCDS34 MWRVLFLLSGLGGLRMDSNFDSLPVQITVPEKIRSIIKEGIESQASYKIVIEGKPYTVNL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 GKQSFLPQNFLVYTYNETGSLHSVSPYFMMHCHYQGYAAEFPNSFVTLSICSGLRGFLQF ...:::.:: ::.:. :: .. .. :. :::::: .:.: : .: :.:::: ::: CCDS34 MQKNFLPHNFRVYSYSGTGIMKPLDQDFQNFCHYQGYIEGYPKSVVMVSTCTGLRGVLQF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 ENISYGIEPVESSARFEHIIYQMKNNDPNVSILAVNYSHIWQKDQPYKVPLNSQVTVIIL ::.::::::.:::. :::.:::.:.. .::. : . : ..: .:. CCDS34 ENVSYGIEPLESSVGFEHVIYQVKHKKADVSLY--NEKDIESRDLSFKLQSVEPQQDFAK 130 140 150 160 170 pF1KE6 ML CCDS34 YIEMHVIVEKQLYNHMGSDTTVVAQKVFQLIGLTNAIFVSFNITIILSSLELWIDENKIA 180 190 200 210 220 230 >>CCDS47846.1 ADAM32 gene_id:203102|Hs108|chr8 (787 aa) initn: 420 init1: 310 opt: 473 Z-score: 613.4 bits: 122.2 E(32554): 7.6e-28 Smith-Waterman score: 473; 44.1% identity (76.5% similar) in 170 aa overlap (1-166:1-165) 10 20 30 40 50 pF1KE6 MFLLLALLTEL-GRLQAHEGSEGIFLHVTVPRKIKSN---DSEVSERKMIYIITIDGQPY :: : ::. : : : .. : .. .:....:.::..: .::. ... ::: :: . : CCDS47 MFRLWLLLAGLCGLLASRPGFQNSLLQIVIPEKIQTNTNDSSEIEYEQISYIIPIDEKLY 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE6 TLHLGKQSFLPQNFLVYTYNETGSLHSVSPYFMMHCHYQGYAAEFPNSFVTLSICSGLRG :.:: .. :: .::..: ::. ::... : .. .:.::: .:.:.:::: :::::: CCDS47 TVHLKQRYFLADNFMIYLYNQ-GSMNTYSSDIQTQCYYQGNIEGYPDSMVTLSTCSGLRG 70 80 90 100 110 120 130 140 150 160 170 pF1KE6 FLQFENISYGIEPVESSARFEHIIYQMKNNDPNVSILAVNYSHIWQKDQPYKVPLNSQVT .:::::.::::::.::...:.:..:..::.: ...:. .. : :.:: CCDS47 ILQFENVSYGIEPLESAVEFQHVLYKLKNEDNDIAIF-IDRS---LKEQPMDDNIFISEK 120 130 140 150 160 170 180 pF1KE6 VIILML CCDS47 SEPAVPDLFPLYLEMHIVVDKTLYDYWGSDSMIVTNKVIEIVGLANSMFTQFKVTIVLSS 180 190 200 210 220 230 >>CCDS83286.1 ADAM32 gene_id:203102|Hs108|chr8 (688 aa) initn: 401 init1: 304 opt: 404 Z-score: 524.8 bits: 105.6 E(32554): 6.5e-23 Smith-Waterman score: 404; 48.0% identity (79.7% similar) in 123 aa overlap (44-166:55-172) 20 30 40 50 60 70 pF1KE6 LQAHEGSEGIFLHVTVPRKIKSNDSEVSERKMIYIITIDGQPYTLHLGKQSFLPQNFLVY .. ::: :: . ::.:: .. :: .::..: CCDS83 LPAGSPEAAPCSASGCCWPGSAASWRQDPEQISYIIPIDEKLYTVHLKQRYFLADNFMIY 30 40 50 60 70 80 80 90 100 110 120 130 pF1KE6 TYNETGSLHSVSPYFMMHCHYQGYAAEFPNSFVTLSICSGLRGFLQFENISYGIEPVESS ::. ::... : .. .:.::: .:.:.:::: ::::::.:::::.::::::.::. CCDS83 LYNQ-GSMNTYSSDIQTQCYYQGNIEGYPDSMVTLSTCSGLRGILQFENVSYGIEPLESA 90 100 110 120 130 140 140 150 160 170 180 pF1KE6 ARFEHIIYQMKNNDPNVSILAVNYSHIWQKDQPYKVPLNSQVTVIILML ..:.:..:..::.: ...:. .. : :.:: CCDS83 VEFQHVLYKLKNEDNDIAIF-IDRS---LKEQPMDDNIFISEKSEPAVPDLFPLYLEMHI 150 160 170 180 190 CCDS83 VVDKTLYDYWGSDSMIVTNKVIEIVGLANSMFTQFKVTIVLSSLELWSDENKISTVGEAD 200 210 220 230 240 250 >>CCDS6112.1 ADAM9 gene_id:8754|Hs108|chr8 (819 aa) initn: 334 init1: 306 opt: 344 Z-score: 445.8 bits: 91.3 E(32554): 1.6e-18 Smith-Waterman score: 344; 46.2% identity (78.8% similar) in 104 aa overlap (43-145:64-167) 20 30 40 50 60 70 pF1KE6 RLQAHEGSEGIFLHVTVPRKIKSNDSEVSERKMIYIITIDGQPYTLHLGK-QSFLPQNFL ... :.: .:. . .:: . ...::..:. CCDS61 FQQTSHLSSYEIITPWRLTRERREAPRPYSKQVSYVIQAEGKEHIIHLERNKDLLPEDFV 40 50 60 70 80 90 80 90 100 110 120 130 pF1KE6 VYTYNETGSLHSVSPYFMMHCHYQGYAAEFPNSFVTLSICSGLRGFLQFENISYGIEPVE :::::. :.: . : .. ::::.::. :: ..:: : ::::.:..:: ::::::.. CCDS61 VYTYNKEGTLITDHPNIQNHCHYRGYVEGVHNSSIALSDCFGLRGLLHLENASYGIEPLQ 100 110 120 130 140 150 140 150 160 170 180 pF1KE6 SSARFEHIIYQMKNNDPNVSILAVNYSHIWQKDQPYKVPLNSQVTVIILML .:..::::::.: . CCDS61 NSSHFEHIIYRMDDVYKEPLKCGVSNKDIEKETAKDEEEEPPSMTQLLRRRRAVLPQTRY 160 170 180 190 200 210 >>CCDS907.1 ADAM30 gene_id:11085|Hs108|chr1 (790 aa) initn: 116 init1: 116 opt: 258 Z-score: 334.5 bits: 70.6 E(32554): 2.6e-12 Smith-Waterman score: 258; 32.2% identity (65.0% similar) in 177 aa overlap (1-168:13-187) 10 20 30 40 pF1KE6 MFLLLA---LLTELGR-LQAHEGSEGIFLHVTVPRKIKSNDSEVSE-- ..:::. :: ::. . : .: .::.:.:. : .::. CCDS90 MRSVQIFLSQCRLLLLLVPTMLLKSLGEDVIFHPEGEFDSYEVTIPEKL-SFRGEVQGVV 10 20 30 40 50 50 60 70 80 90 100 pF1KE6 RKMIYIITIDGQPYTLHL-GKQSFLPQNFLVYTYNETGSLHSVSPYFMMHCHYQGYAAEF . :.. . :. ..::: :. .::... :....: : : ::. :.:.: . : CCDS90 SPVSYLLQLKGKKHVLHLWPKRLLLPRHLRVFSFTEHGELLEDHPYIPKDCNYMGSVKES 60 70 80 90 100 110 110 120 130 140 150 160 pF1KE6 PNSFVTLSIC-SGLRGFLQFENISYGIEPVESSARFEHIIYQMKNNDPNVSILAVNYSHI .: .:.: : .:::: .... : :::...: :::..: .:... . .. ... ..: CCDS90 LDSKATISTCMGGLRGVFNIDAKHYQIEPLKASPSFEHVVYLLKKEQFGNQVCGLSDDEI 120 130 140 150 160 170 170 180 pF1KE6 -WQKDQPYKVPLNSQVTVIILML :: ::. CCDS90 EWQM-APYENKARLRDFPGSYKHPKYLELILLFDQSRYRFVNNNLSQVIHDAILLTGIMD 180 190 200 210 220 230 182 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 11:39:54 2016 done: Tue Nov 8 11:39:55 2016 Total Scan time: 1.470 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]