FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6646, 226 aa 1>>>pF1KE6646 226 - 226 aa - 226 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.3971+/-0.00044; mu= -2.6218+/- 0.027 mean_var=256.1150+/-54.125, 0's: 0 Z-trim(116.9): 282 B-trim: 231 in 1/56 Lambda= 0.080141 statistics sampled from 28150 (28525) to 28150 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.703), E-opt: 0.2 (0.334), width: 16 Scan time: 5.450 The best scores are: opt bits E(85289) NP_776169 (OMIM: 613173) neuronal growth regulator ( 354) 1507 187.5 2.4e-47 XP_011539502 (OMIM: 613173) PREDICTED: neuronal gr ( 320) 1240 156.6 4.4e-38 NP_002329 (OMIM: 603241) limbic system-associated ( 338) 768 102.1 1.2e-21 XP_011511142 (OMIM: 603241) PREDICTED: limbic syst ( 344) 729 97.6 2.8e-20 XP_016861872 (OMIM: 603241) PREDICTED: limbic syst ( 350) 729 97.6 2.8e-20 NP_001305844 (OMIM: 603241) limbic system-associat ( 361) 729 97.6 2.9e-20 XP_006718909 (OMIM: 167000,600632) PREDICTED: opio ( 337) 707 95.0 1.6e-19 XP_006718920 (OMIM: 607938) PREDICTED: neurotrimin ( 303) 706 94.9 1.6e-19 NP_001306035 (OMIM: 167000,600632) opioid-binding ( 344) 707 95.0 1.6e-19 XP_016873353 (OMIM: 607938) PREDICTED: neurotrimin ( 325) 706 94.9 1.7e-19 XP_016873351 (OMIM: 607938) PREDICTED: neurotrimin ( 335) 706 94.9 1.7e-19 XP_016873350 (OMIM: 607938) PREDICTED: neurotrimin ( 335) 706 94.9 1.7e-19 NP_057606 (OMIM: 607938) neurotrimin isoform 1 pre ( 344) 706 94.9 1.8e-19 XP_016873349 (OMIM: 607938) PREDICTED: neurotrimin ( 344) 706 94.9 1.8e-19 NP_001041674 (OMIM: 607938) neurotrimin isoform 2 ( 344) 706 94.9 1.8e-19 XP_016873342 (OMIM: 607938) PREDICTED: neurotrimin ( 376) 706 95.0 1.9e-19 XP_016873341 (OMIM: 607938) PREDICTED: neurotrimin ( 385) 706 95.0 1.9e-19 XP_016873340 (OMIM: 607938) PREDICTED: neurotrimin ( 385) 706 95.0 1.9e-19 XP_016873355 (OMIM: 607938) PREDICTED: neurotrimin ( 285) 699 94.0 2.7e-19 XP_011541163 (OMIM: 607938) PREDICTED: neurotrimin ( 326) 699 94.1 3e-19 XP_016873354 (OMIM: 607938) PREDICTED: neurotrimin ( 326) 699 94.1 3e-19 NP_001306033 (OMIM: 167000,600632) opioid-binding ( 245) 696 93.6 3.1e-19 XP_016873345 (OMIM: 607938) PREDICTED: neurotrimin ( 358) 699 94.1 3.2e-19 XP_016873346 (OMIM: 607938) PREDICTED: neurotrimin ( 358) 699 94.1 3.2e-19 XP_005271637 (OMIM: 607938) PREDICTED: neurotrimin ( 367) 699 94.1 3.2e-19 XP_005271638 (OMIM: 607938) PREDICTED: neurotrimin ( 367) 699 94.1 3.2e-19 NP_001306034 (OMIM: 167000,600632) opioid-binding ( 304) 696 93.7 3.6e-19 XP_011541158 (OMIM: 167000,600632) PREDICTED: opio ( 304) 696 93.7 3.6e-19 NP_001012393 (OMIM: 167000,600632) opioid-binding ( 338) 696 93.8 3.9e-19 NP_002536 (OMIM: 167000,600632) opioid-binding pro ( 345) 696 93.8 4e-19 XP_016873352 (OMIM: 607938) PREDICTED: neurotrimin ( 332) 693 93.4 4.9e-19 NP_001137531 (OMIM: 607938) neurotrimin isoform 4 ( 316) 692 93.3 5.1e-19 XP_016873344 (OMIM: 607938) PREDICTED: neurotrimin ( 373) 693 93.5 5.3e-19 XP_016873343 (OMIM: 607938) PREDICTED: neurotrimin ( 373) 693 93.5 5.3e-19 XP_016873348 (OMIM: 607938) PREDICTED: neurotrimin ( 346) 692 93.3 5.5e-19 XP_016873347 (OMIM: 607938) PREDICTED: neurotrimin ( 346) 692 93.3 5.5e-19 XP_006718918 (OMIM: 607938) PREDICTED: neurotrimin ( 346) 692 93.3 5.5e-19 NP_001137530 (OMIM: 607938) neurotrimin isoform 3 ( 355) 692 93.3 5.6e-19 XP_005271639 (OMIM: 607938) PREDICTED: neurotrimin ( 355) 692 93.3 5.6e-19 NP_001306032 (OMIM: 167000,600632) opioid-binding ( 354) 684 92.4 1.1e-18 XP_011539503 (OMIM: 613173) PREDICTED: neuronal gr ( 234) 637 86.8 3.4e-17 XP_016856450 (OMIM: 613173) PREDICTED: neuronal gr ( 222) 633 86.3 4.6e-17 XP_016861873 (OMIM: 603241) PREDICTED: limbic syst ( 197) 478 68.3 1e-11 XP_016874315 (OMIM: 600016,612540) PREDICTED: cont ( 627) 292 47.3 6.8e-05 NP_001242992 (OMIM: 600016,612540) contactin-1 iso ( 627) 292 47.3 6.8e-05 XP_016874314 (OMIM: 600016,612540) PREDICTED: cont ( 627) 292 47.3 6.8e-05 XP_016874316 (OMIM: 600016,612540) PREDICTED: cont ( 627) 292 47.3 6.8e-05 NP_001242993 (OMIM: 600016,612540) contactin-1 iso ( 627) 292 47.3 6.8e-05 NP_778203 (OMIM: 600016,612540) contactin-1 isofor (1007) 292 47.6 9.4e-05 XP_016874313 (OMIM: 600016,612540) PREDICTED: cont (1015) 292 47.6 9.4e-05 >>NP_776169 (OMIM: 613173) neuronal growth regulator 1 p (354 aa) initn: 1507 init1: 1507 opt: 1507 Z-score: 971.0 bits: 187.5 E(85289): 2.4e-47 Smith-Waterman score: 1507; 100.0% identity (100.0% similar) in 226 aa overlap (1-226:129-354) 10 20 30 pF1KE6 MQVHLTVQVPPKIYDISNDMTVNEGTNVTL :::::::::::::::::::::::::::::: NP_776 RDYSLQIQNVDVTDDGPYTCSVQTQHTPRTMQVHLTVQVPPKIYDISNDMTVNEGTNVTL 100 110 120 130 140 150 40 50 60 70 80 90 pF1KE6 TCLATGKPEPSISWRHISPSAKPFENGQYLDIYGITRDQAGEYECSAENDVSFPDVRKVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_776 TCLATGKPEPSISWRHISPSAKPFENGQYLDIYGITRDQAGEYECSAENDVSFPDVRKVK 160 170 180 190 200 210 100 110 120 130 140 150 pF1KE6 VVVNFAPTIQEIKSGTVTPGRSGLIRCEGAGVPPPAFEWYKGEKKLFNGQQGIIIQNFST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_776 VVVNFAPTIQEIKSGTVTPGRSGLIRCEGAGVPPPAFEWYKGEKKLFNGQQGIIIQNFST 220 230 240 250 260 270 160 170 180 190 200 210 pF1KE6 RSILTVTNVTQEHFGNYTCVAANKLGTTNASLPLNPPSTAQYGITGSADVLFSCWYLVLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_776 RSILTVTNVTQEHFGNYTCVAANKLGTTNASLPLNPPSTAQYGITGSADVLFSCWYLVLT 280 290 300 310 320 330 220 pF1KE6 LSSFTSIFYLKNAILQ :::::::::::::::: NP_776 LSSFTSIFYLKNAILQ 340 350 >>XP_011539502 (OMIM: 613173) PREDICTED: neuronal growth (320 aa) initn: 1240 init1: 1240 opt: 1240 Z-score: 804.7 bits: 156.6 E(85289): 4.4e-38 Smith-Waterman score: 1240; 100.0% identity (100.0% similar) in 185 aa overlap (1-185:129-313) 10 20 30 pF1KE6 MQVHLTVQVPPKIYDISNDMTVNEGTNVTL :::::::::::::::::::::::::::::: XP_011 RDYSLQIQNVDVTDDGPYTCSVQTQHTPRTMQVHLTVQVPPKIYDISNDMTVNEGTNVTL 100 110 120 130 140 150 40 50 60 70 80 90 pF1KE6 TCLATGKPEPSISWRHISPSAKPFENGQYLDIYGITRDQAGEYECSAENDVSFPDVRKVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 TCLATGKPEPSISWRHISPSAKPFENGQYLDIYGITRDQAGEYECSAENDVSFPDVRKVK 160 170 180 190 200 210 100 110 120 130 140 150 pF1KE6 VVVNFAPTIQEIKSGTVTPGRSGLIRCEGAGVPPPAFEWYKGEKKLFNGQQGIIIQNFST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 VVVNFAPTIQEIKSGTVTPGRSGLIRCEGAGVPPPAFEWYKGEKKLFNGQQGIIIQNFST 220 230 240 250 260 270 160 170 180 190 200 210 pF1KE6 RSILTVTNVTQEHFGNYTCVAANKLGTTNASLPLNPPSTAQYGITGSADVLFSCWYLVLT ::::::::::::::::::::::::::::::::::: XP_011 RSILTVTNVTQEHFGNYTCVAANKLGTTNASLPLNHKKEVSS 280 290 300 310 320 220 pF1KE6 LSSFTSIFYLKNAILQ >>NP_002329 (OMIM: 603241) limbic system-associated memb (338 aa) initn: 675 init1: 359 opt: 768 Z-score: 509.5 bits: 102.1 E(85289): 1.2e-21 Smith-Waterman score: 768; 53.7% identity (81.0% similar) in 216 aa overlap (2-216:123-336) 10 20 30 pF1KE6 MQVHLTVQVPPKIYDISNDMTVNEGTNVTLT ::.: ::::::: .::.:.:::::.::::. NP_002 EYSLRIQKVDVYDEGSYTCSVQTQHEPKTSQVYLIVQVPPKISNISSDVTVNEGSNVTLV 100 110 120 130 140 150 40 50 60 70 80 90 pF1KE6 CLATGKPEPSISWRHISPSAKPFENGQ-YLDIYGITRDQAGEYECSAENDVSFPDVRKVK :.:.:.::: :.:::..:... ::. . ::.: ::::.:.:.:::.: :.:: ::..:: NP_002 CMANGRPEPVITWRHLTPTGREFEGEEEYLEILGITREQSGKYECKAANEVSSADVKQVK 160 170 180 190 200 210 100 110 120 130 140 150 pF1KE6 VVVNFAPTIQEIKSGTVTPGRSGLIRCEGAGVPPPAFEWYKGEKKLFNGQQGIIIQNFST :.::. ::: : ::. .: ::.. ..::...:: : ::::. . .. :. .:. :.. NP_002 VTVNYPPTITESKSNEATTGRQASLKCEASAVPAPDFEWYRDDTRI-NSANGLEIKSTEG 220 230 240 250 260 270 160 170 180 190 200 210 pF1KE6 RSILTVTNVTQEHFGNYTCVAANKLGTTNASLPLNPPSTAQYGITGSADVLFSCWYLVLT .: :::::::.::.::::::::::::.::::: : :.... ::.:: .. : :. . NP_002 QSSLTVTNVTEEHYGNYTCVAANKLGVTNASLVLFRPGSVR-GINGSISLAVPLWLLAAS 280 290 300 310 320 330 220 pF1KE6 LSSFTSIFYLKNAILQ : . : NP_002 LLCLLSKC >>XP_011511142 (OMIM: 603241) PREDICTED: limbic system-a (344 aa) initn: 675 init1: 359 opt: 729 Z-score: 485.1 bits: 97.6 E(85289): 2.8e-20 Smith-Waterman score: 729; 58.2% identity (84.8% similar) in 184 aa overlap (2-184:123-305) 10 20 30 pF1KE6 MQVHLTVQVPPKIYDISNDMTVNEGTNVTLT ::.: ::::::: .::.:.:::::.::::. XP_011 EYSLRIQKVDVYDEGSYTCSVQTQHEPKTSQVYLIVQVPPKISNISSDVTVNEGSNVTLV 100 110 120 130 140 150 40 50 60 70 80 90 pF1KE6 CLATGKPEPSISWRHISPSAKPFENGQ-YLDIYGITRDQAGEYECSAENDVSFPDVRKVK :.:.:.::: :.:::..:... ::. . ::.: ::::.:.:.:::.: :.:: ::..:: XP_011 CMANGRPEPVITWRHLTPTGREFEGEEEYLEILGITREQSGKYECKAANEVSSADVKQVK 160 170 180 190 200 210 100 110 120 130 140 150 pF1KE6 VVVNFAPTIQEIKSGTVTPGRSGLIRCEGAGVPPPAFEWYKGEKKLFNGQQGIIIQNFST :.::. ::: : ::. .: ::.. ..::...:: : ::::. . .. :. .:. :.. XP_011 VTVNYPPTITESKSNEATTGRQASLKCEASAVPAPDFEWYRDDTRI-NSANGLEIKSTEG 220 230 240 250 260 270 160 170 180 190 200 210 pF1KE6 RSILTVTNVTQEHFGNYTCVAANKLGTTNASLPLNPPSTAQYGITGSADVLFSCWYLVLT .: :::::::.::.::::::::::::.::::: : XP_011 QSSLTVTNVTEEHYGNYTCVAANKLGVTNASLVLFKRVLPTIPHPIQVYLCLALLHNGSA 280 290 300 310 320 330 220 pF1KE6 LSSFTSIFYLKNAILQ XP_011 PRDILTLRTVGSE 340 >>XP_016861872 (OMIM: 603241) PREDICTED: limbic system-a (350 aa) initn: 675 init1: 359 opt: 729 Z-score: 485.0 bits: 97.6 E(85289): 2.8e-20 Smith-Waterman score: 749; 50.9% identity (77.6% similar) in 228 aa overlap (2-216:123-348) 10 20 30 pF1KE6 MQVHLTVQVPPKIYDISNDMTVNEGTNVTLT ::.: ::::::: .::.:.:::::.::::. XP_016 EYSLRIQKVDVYDEGSYTCSVQTQHEPKTSQVYLIVQVPPKISNISSDVTVNEGSNVTLV 100 110 120 130 140 150 40 50 60 70 80 90 pF1KE6 CLATGKPEPSISWRHISPSAKPFENGQ-YLDIYGITRDQAGEYECSAENDVSFPDVRKVK :.:.:.::: :.:::..:... ::. . ::.: ::::.:.:.:::.: :.:: ::..:: XP_016 CMANGRPEPVITWRHLTPTGREFEGEEEYLEILGITREQSGKYECKAANEVSSADVKQVK 160 170 180 190 200 210 100 110 120 130 140 150 pF1KE6 VVVNFAPTIQEIKSGTVTPGRSGLIRCEGAGVPPPAFEWYKGEKKLFNGQQGIIIQNFST :.::. ::: : ::. .: ::.. ..::...:: : ::::. . .. :. .:. :.. XP_016 VTVNYPPTITESKSNEATTGRQASLKCEASAVPAPDFEWYRDDTRI-NSANGLEIKSTEG 220 230 240 250 260 270 160 170 180 190 pF1KE6 RSILTVTNVTQEHFGNYTCVAANKLGTTNASL------------PLNPPSTAQYGITGSA .: :::::::.::.::::::::::::.::::: :.. :.... ::.:: XP_016 QSSLTVTNVTEEHYGNYTCVAANKLGVTNASLVLFKRVLPTIPHPIQGPGSVR-GINGSI 280 290 300 310 320 330 200 210 220 pF1KE6 DVLFSCWYLVLTLSSFTSIFYLKNAILQ .. : :. .: . : XP_016 SLAVPLWLLAASLLCLLSKC 340 350 >>NP_001305844 (OMIM: 603241) limbic system-associated m (361 aa) initn: 675 init1: 359 opt: 729 Z-score: 484.8 bits: 97.6 E(85289): 2.9e-20 Smith-Waterman score: 729; 58.2% identity (84.8% similar) in 184 aa overlap (2-184:123-305) 10 20 30 pF1KE6 MQVHLTVQVPPKIYDISNDMTVNEGTNVTLT ::.: ::::::: .::.:.:::::.::::. NP_001 EYSLRIQKVDVYDEGSYTCSVQTQHEPKTSQVYLIVQVPPKISNISSDVTVNEGSNVTLV 100 110 120 130 140 150 40 50 60 70 80 90 pF1KE6 CLATGKPEPSISWRHISPSAKPFENGQ-YLDIYGITRDQAGEYECSAENDVSFPDVRKVK :.:.:.::: :.:::..:... ::. . ::.: ::::.:.:.:::.: :.:: ::..:: NP_001 CMANGRPEPVITWRHLTPTGREFEGEEEYLEILGITREQSGKYECKAANEVSSADVKQVK 160 170 180 190 200 210 100 110 120 130 140 150 pF1KE6 VVVNFAPTIQEIKSGTVTPGRSGLIRCEGAGVPPPAFEWYKGEKKLFNGQQGIIIQNFST :.::. ::: : ::. .: ::.. ..::...:: : ::::. . .. :. .:. :.. NP_001 VTVNYPPTITESKSNEATTGRQASLKCEASAVPAPDFEWYRDDTRI-NSANGLEIKSTEG 220 230 240 250 260 270 160 170 180 190 200 210 pF1KE6 RSILTVTNVTQEHFGNYTCVAANKLGTTNASLPLNPPSTAQYGITGSADVLFSCWYLVLT .: :::::::.::.::::::::::::.::::: : NP_001 QSSLTVTNVTEEHYGNYTCVAANKLGVTNASLVLFKRVLPTIPHPIQEIGTTVHFKQKGP 280 290 300 310 320 330 220 pF1KE6 LSSFTSIFYLKNAILQ NP_001 GSVRGINGSISLAVPLWLLAASLLCLLSKC 340 350 360 >>XP_006718909 (OMIM: 167000,600632) PREDICTED: opioid-b (337 aa) initn: 699 init1: 449 opt: 707 Z-score: 471.4 bits: 95.0 E(85289): 1.6e-19 Smith-Waterman score: 707; 48.9% identity (76.9% similar) in 221 aa overlap (2-221:120-336) 10 20 30 pF1KE6 MQVHLTVQVPPKIYDISNDMTVNEGTNVTLT .::: :::::.:..::.:.:::::..::: XP_006 QYSIMIQNVDVYDEGPYTCSVQTDNHPKTSRVHLIVQVPPQIMNISSDITVNEGSSVTLL 90 100 110 120 130 140 40 50 60 70 80 90 pF1KE6 CLATGKPEPSISWRHISPSAKPF-ENGQYLDIYGITRDQAGEYECSAENDVSFPDVRKVK ::: :.:::...:::.: ... : . .::.: : :::.::::::: :::. ::::::: XP_006 CLAIGRPEPTVTWRHLSVKGQGFVSEDEYLEISDIKRDQSGEYECSALNDVAAPDVRKVK 150 160 170 180 190 200 100 110 120 130 140 150 pF1KE6 VVVNFAPTIQEIKSGTVTPGRSGLIRCEGAGVPPPAFEWYKGEKKLFNGQQGIIIQNFST ..::. : :.. :. :. :..:.. ::...:: :.:.: : .: .: .:. :.: . XP_006 ITVNYPPYISKAKNTGVSVGQKGILSCEASAVPMAEFQWFKEETRLATGLDGMRIENKGR 210 220 230 240 250 260 160 170 180 190 200 210 pF1KE6 RSILTVTNVTQEHFGNYTCVAANKLGTTNASLPLNPPSTAQYGITGSADVLFSCWYLVLT : :: ::... .:::::::.::::.::::. : :... :.. ::. ..: .: : XP_006 MSTLTFFNVSEKDYGNYTCVATNKLGNTNASITLYGPGAVIDGVN-SASRALACLWLSGT 270 280 290 300 310 320 220 pF1KE6 LSSFTSIFYLKNAILQ : . :..: XP_006 LLAH---FFIKF 330 >>XP_006718920 (OMIM: 607938) PREDICTED: neurotrimin iso (303 aa) initn: 690 init1: 445 opt: 706 Z-score: 471.3 bits: 94.9 E(85289): 1.6e-19 Smith-Waterman score: 706; 49.3% identity (76.6% similar) in 209 aa overlap (2-209:86-294) 10 20 30 pF1KE6 MQVHLTVQVPPKIYDISNDMTVNEGTNVTLT .::: ::: ::: .::.:...:::.:..:: XP_006 QYSIEIQNVDVYDEGPYTCSVQTDNHPKTSRVHLIVQVSPKIVEISSDISINEGNNISLT 60 70 80 90 100 110 40 50 60 70 80 90 pF1KE6 CLATGKPEPSISWRHISPSAKPF-ENGQYLDIYGITRDQAGEYECSAENDVSFPDVRKVK :.:::.:::...::::::.: : . .::.: ::::.:.:.::::: :::. : ::.:: XP_006 CIATGRPEPTVTWRHISPKAVGFVSEDEYLEIQGITREQSGDYECSASNDVAAPVVRRVK 120 130 140 150 160 170 100 110 120 130 140 150 pF1KE6 VVVNFAPTIQEIKSGTVTPGRSGLIRCEGAGVPPPAFEWYKGEKKLFNGQQGIIIQNFST :.::. : :.: :. : :..: ..::...:: :.::: .:.:..:..:. ..: XP_006 VTVNYPPYISEAKGTGVPVGQKGTLQCEASAVPSAEFQWYKDDKRLIEGKKGVKVENRPF 180 190 200 210 220 230 160 170 180 190 200 210 pF1KE6 RSILTVTNVTQEHFGNYTCVAANKLGTTNASLPLNPPSTAQYGITGSADVLFSCWYLVLT : : ::... .:::::::.:::: ::::. : :.... .:.. : : : XP_006 LSKLIFFNVSEHDYGNYTCVASNKLGHTNASIMLFGPGAVSEVSNGTSRRAGCVWLLPLL 240 250 260 270 280 290 220 pF1KE6 LSSFTSIFYLKNAILQ XP_006 VLHLLLKF 300 >>NP_001306035 (OMIM: 167000,600632) opioid-binding prot (344 aa) initn: 699 init1: 449 opt: 707 Z-score: 471.3 bits: 95.0 E(85289): 1.6e-19 Smith-Waterman score: 707; 48.9% identity (76.9% similar) in 221 aa overlap (2-221:127-343) 10 20 30 pF1KE6 MQVHLTVQVPPKIYDISNDMTVNEGTNVTLT .::: :::::.:..::.:.:::::..::: NP_001 QYSIMIQNVDVYDEGPYTCSVQTDNHPKTSRVHLIVQVPPQIMNISSDITVNEGSSVTLL 100 110 120 130 140 150 40 50 60 70 80 90 pF1KE6 CLATGKPEPSISWRHISPSAKPF-ENGQYLDIYGITRDQAGEYECSAENDVSFPDVRKVK ::: :.:::...:::.: ... : . .::.: : :::.::::::: :::. ::::::: NP_001 CLAIGRPEPTVTWRHLSVKGQGFVSEDEYLEISDIKRDQSGEYECSALNDVAAPDVRKVK 160 170 180 190 200 210 100 110 120 130 140 150 pF1KE6 VVVNFAPTIQEIKSGTVTPGRSGLIRCEGAGVPPPAFEWYKGEKKLFNGQQGIIIQNFST ..::. : :.. :. :. :..:.. ::...:: :.:.: : .: .: .:. :.: . NP_001 ITVNYPPYISKAKNTGVSVGQKGILSCEASAVPMAEFQWFKEETRLATGLDGMRIENKGR 220 230 240 250 260 270 160 170 180 190 200 210 pF1KE6 RSILTVTNVTQEHFGNYTCVAANKLGTTNASLPLNPPSTAQYGITGSADVLFSCWYLVLT : :: ::... .:::::::.::::.::::. : :... :.. ::. ..: .: : NP_001 MSTLTFFNVSEKDYGNYTCVATNKLGNTNASITLYGPGAVIDGVN-SASRALACLWLSGT 280 290 300 310 320 330 220 pF1KE6 LSSFTSIFYLKNAILQ : . :..: NP_001 LLAH---FFIKF 340 >>XP_016873353 (OMIM: 607938) PREDICTED: neurotrimin iso (325 aa) initn: 690 init1: 445 opt: 706 Z-score: 471.0 bits: 94.9 E(85289): 1.7e-19 Smith-Waterman score: 706; 49.3% identity (76.6% similar) in 209 aa overlap (2-209:108-316) 10 20 30 pF1KE6 MQVHLTVQVPPKIYDISNDMTVNEGTNVTLT .::: ::: ::: .::.:...:::.:..:: XP_016 QYSIEIQNVDVYDEGPYTCSVQTDNHPKTSRVHLIVQVSPKIVEISSDISINEGNNISLT 80 90 100 110 120 130 40 50 60 70 80 90 pF1KE6 CLATGKPEPSISWRHISPSAKPF-ENGQYLDIYGITRDQAGEYECSAENDVSFPDVRKVK :.:::.:::...::::::.: : . .::.: ::::.:.:.::::: :::. : ::.:: XP_016 CIATGRPEPTVTWRHISPKAVGFVSEDEYLEIQGITREQSGDYECSASNDVAAPVVRRVK 140 150 160 170 180 190 100 110 120 130 140 150 pF1KE6 VVVNFAPTIQEIKSGTVTPGRSGLIRCEGAGVPPPAFEWYKGEKKLFNGQQGIIIQNFST :.::. : :.: :. : :..: ..::...:: :.::: .:.:..:..:. ..: XP_016 VTVNYPPYISEAKGTGVPVGQKGTLQCEASAVPSAEFQWYKDDKRLIEGKKGVKVENRPF 200 210 220 230 240 250 160 170 180 190 200 210 pF1KE6 RSILTVTNVTQEHFGNYTCVAANKLGTTNASLPLNPPSTAQYGITGSADVLFSCWYLVLT : : ::... .:::::::.:::: ::::. : :.... .:.. : : : XP_016 LSKLIFFNVSEHDYGNYTCVASNKLGHTNASIMLFGPGAVSEVSNGTSRRAGCVWLLPLL 260 270 280 290 300 310 220 pF1KE6 LSSFTSIFYLKNAILQ XP_016 VLHLLLKF 320 226 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 15:04:56 2016 done: Tue Nov 8 15:04:57 2016 Total Scan time: 5.450 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]