FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE9686, 533 aa 1>>>pF1KE9686 533 - 533 aa - 533 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.8173+/-0.000809; mu= 11.4262+/- 0.049 mean_var=91.3351+/-18.121, 0's: 0 Z-trim(109.2): 25 B-trim: 74 in 1/51 Lambda= 0.134201 statistics sampled from 10698 (10708) to 10698 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.691), E-opt: 0.2 (0.329), width: 16 Scan time: 2.590 The best scores are: opt bits E(32554) CCDS58344.1 FAN1 gene_id:22909|Hs108|chr15 ( 533) 3455 679.0 3.7e-195 CCDS32186.1 FAN1 gene_id:22909|Hs108|chr15 (1017) 3397 667.8 1.6e-191 >>CCDS58344.1 FAN1 gene_id:22909|Hs108|chr15 (533 aa) initn: 3415 init1: 3415 opt: 3455 Z-score: 3617.1 bits: 679.0 E(32554): 3.7e-195 Smith-Waterman score: 3455; 99.6% identity (99.6% similar) in 533 aa overlap (1-533:2-533) 10 20 30 40 50 pF1KE9 MSEGKPPDKKKRPRRSLSISKNKKKASNSIISCFNNAPPAKLACPVCSKMVPRYDLNRH :::::::::: :::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 MMSEGKPPDKK-RPRRSLSISKNKKKASNSIISCFNNAPPAKLACPVCSKMVPRYDLNRH 10 20 30 40 50 60 70 80 90 100 110 pF1KE9 LDEMCANNDFVQVDPGQVGLINSNVSMVDLTSVTLEDVTPKKSPPPKTNLTPGQSDSAKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 LDEMCANNDFVQVDPGQVGLINSNVSMVDLTSVTLEDVTPKKSPPPKTNLTPGQSDSAKR 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE9 EVKQKISPYFKSNDVVCKNQDELRNRSVKVICLGSLASKLSRKYVKAKKSIDKDEEFAGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 EVKQKISPYFKSNDVVCKNQDELRNRSVKVICLGSLASKLSRKYVKAKKSIDKDEEFAGS 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE9 SPQSSKSTVVKSLIDNSSEIEDEDQILENSSQKENVFKCDSLKEECIPEHMVRESKIMEA ::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::: CCDS58 SPQSSKSTVVKSLIDNSSEIEDEDQILENSSQKENVFKCDSLKEECIPEHMVRGSKIMEA 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE9 ESQKATRECEKSALTPGFSDNAIMLFSPDFTLRNTLKSTSEDSLVKQECIKEVVEKREAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 ESQKATRECEKSALTPGFSDNAIMLFSPDFTLRNTLKSTSEDSLVKQECIKEVVEKREAC 240 250 260 270 280 290 300 310 320 330 340 350 pF1KE9 HCEEVKMTVASEAKIQLSDSEAKSHSSADDASAWSNIQEAPLQDDSCLNNDIPHSIPLEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 HCEEVKMTVASEAKIQLSDSEAKSHSSADDASAWSNIQEAPLQDDSCLNNDIPHSIPLEQ 300 310 320 330 340 350 360 370 380 390 400 410 pF1KE9 GSSCNGPGQTTGHPYYLRSFLVVLKTVLENEDDMLLFDEQEKGIVTKFYQLSATGQKLYV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 GSSCNGPGQTTGHPYYLRSFLVVLKTVLENEDDMLLFDEQEKGIVTKFYQLSATGQKLYV 360 370 380 390 400 410 420 430 440 450 460 470 pF1KE9 RLFQRKLSWIKMTKLEYEEIALDLTPVIEELTNAGFLQTESELQELSEVLELLSAPELKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 RLFQRKLSWIKMTKLEYEEIALDLTPVIEELTNAGFLQTESELQELSEVLELLSAPELKS 420 430 440 450 460 470 480 490 500 510 520 530 pF1KE9 LAKTFHLVNPNGQKQQLVDAFLKLAKQRSVCTWGKNKPGIGAVILKRFCWLLLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 LAKTFHLVNPNGQKQQLVDAFLKLAKQRSVCTWGKNKPGIGAVILKRFCWLLLQ 480 490 500 510 520 530 >>CCDS32186.1 FAN1 gene_id:22909|Hs108|chr15 (1017 aa) initn: 3357 init1: 3357 opt: 3397 Z-score: 3551.8 bits: 667.8 E(32554): 1.6e-191 Smith-Waterman score: 3397; 99.6% identity (99.6% similar) in 526 aa overlap (1-526:2-526) 10 20 30 40 50 pF1KE9 MSEGKPPDKKKRPRRSLSISKNKKKASNSIISCFNNAPPAKLACPVCSKMVPRYDLNRH :::::::::: :::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 MMSEGKPPDKK-RPRRSLSISKNKKKASNSIISCFNNAPPAKLACPVCSKMVPRYDLNRH 10 20 30 40 50 60 70 80 90 100 110 pF1KE9 LDEMCANNDFVQVDPGQVGLINSNVSMVDLTSVTLEDVTPKKSPPPKTNLTPGQSDSAKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 LDEMCANNDFVQVDPGQVGLINSNVSMVDLTSVTLEDVTPKKSPPPKTNLTPGQSDSAKR 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE9 EVKQKISPYFKSNDVVCKNQDELRNRSVKVICLGSLASKLSRKYVKAKKSIDKDEEFAGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 EVKQKISPYFKSNDVVCKNQDELRNRSVKVICLGSLASKLSRKYVKAKKSIDKDEEFAGS 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE9 SPQSSKSTVVKSLIDNSSEIEDEDQILENSSQKENVFKCDSLKEECIPEHMVRESKIMEA ::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::: CCDS32 SPQSSKSTVVKSLIDNSSEIEDEDQILENSSQKENVFKCDSLKEECIPEHMVRGSKIMEA 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE9 ESQKATRECEKSALTPGFSDNAIMLFSPDFTLRNTLKSTSEDSLVKQECIKEVVEKREAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 ESQKATRECEKSALTPGFSDNAIMLFSPDFTLRNTLKSTSEDSLVKQECIKEVVEKREAC 240 250 260 270 280 290 300 310 320 330 340 350 pF1KE9 HCEEVKMTVASEAKIQLSDSEAKSHSSADDASAWSNIQEAPLQDDSCLNNDIPHSIPLEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 HCEEVKMTVASEAKIQLSDSEAKSHSSADDASAWSNIQEAPLQDDSCLNNDIPHSIPLEQ 300 310 320 330 340 350 360 370 380 390 400 410 pF1KE9 GSSCNGPGQTTGHPYYLRSFLVVLKTVLENEDDMLLFDEQEKGIVTKFYQLSATGQKLYV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 GSSCNGPGQTTGHPYYLRSFLVVLKTVLENEDDMLLFDEQEKGIVTKFYQLSATGQKLYV 360 370 380 390 400 410 420 430 440 450 460 470 pF1KE9 RLFQRKLSWIKMTKLEYEEIALDLTPVIEELTNAGFLQTESELQELSEVLELLSAPELKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 RLFQRKLSWIKMTKLEYEEIALDLTPVIEELTNAGFLQTESELQELSEVLELLSAPELKS 420 430 440 450 460 470 480 490 500 510 520 530 pF1KE9 LAKTFHLVNPNGQKQQLVDAFLKLAKQRSVCTWGKNKPGIGAVILKRFCWLLLQ ::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 LAKTFHLVNPNGQKQQLVDAFLKLAKQRSVCTWGKNKPGIGAVILKRAKALAGQSVRICK 480 490 500 510 520 530 CCDS32 GPRAVFSRILLLFSLTDSMEDEDAACGGQGQLSTVLLVNLGRMEFPSYTINRKTHIFQDR 540 550 560 570 580 590 533 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 10:34:27 2016 done: Tue Nov 8 10:34:27 2016 Total Scan time: 2.590 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]