FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6778, 540 aa 1>>>pF1KE6778 540 - 540 aa - 540 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 9.1609+/-0.000963; mu= 2.7355+/- 0.058 mean_var=216.1368+/-42.891, 0's: 0 Z-trim(112.1): 5 B-trim: 10 in 1/51 Lambda= 0.087239 statistics sampled from 12939 (12942) to 12939 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.718), E-opt: 0.2 (0.398), width: 16 Scan time: 3.760 The best scores are: opt bits E(32554) CCDS54448.1 BFSP1 gene_id:631|Hs108|chr20 ( 540) 3452 447.2 2.3e-125 CCDS13126.1 BFSP1 gene_id:631|Hs108|chr20 ( 665) 3445 446.4 5e-125 CCDS63229.1 BFSP1 gene_id:631|Hs108|chr20 ( 526) 3352 434.6 1.4e-121 >>CCDS54448.1 BFSP1 gene_id:631|Hs108|chr20 (540 aa) initn: 3452 init1: 3452 opt: 3452 Z-score: 2364.2 bits: 447.2 E(32554): 2.3e-125 Smith-Waterman score: 3452; 100.0% identity (100.0% similar) in 540 aa overlap (1-540:1-540) 10 20 30 40 50 60 pF1KE6 MYENECECQLLLKEMLERLNKEADEALLHNLRLQLEAQFLQDDISAAKDRHKKNLLEVQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 MYENECECQLLLKEMLERLNKEADEALLHNLRLQLEAQFLQDDISAAKDRHKKNLLEVQT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 YISILQQIIHTTPPASIVTSGMREEKLLTEREVAALRSQLEEGREVLSHLQAQRVELQAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 YISILQQIIHTTPPASIVTSGMREEKLLTEREVAALRSQLEEGREVLSHLQAQRVELQAQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 TTTLEQAIKSAHECYDDEIQLYNEQIETLRKEIEETERVLEKSSYDCRQLAVAQQTLKNE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 TTTLEQAIKSAHECYDDEIQLYNEQIETLRKEIEETERVLEKSSYDCRQLAVAQQTLKNE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 LDRYHRIIEIEGNRLTSAFIETPIPLFTQSHGVSLSTGSGGKDLTRALQDITAAKPRQKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 LDRYHRIIEIEGNRLTSAFIETPIPLFTQSHGVSLSTGSGGKDLTRALQDITAAKPRQKA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 LPKNVPRRKEIITKDKTNGALEDAPLKGLEDTKLVQVVLKEESESKFESESKEVSPLTQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 LPKNVPRRKEIITKDKTNGALEDAPLKGLEDTKLVQVVLKEESESKFESESKEVSPLTQE 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 GAPEDVPDGGQISKGFGKLYRKVKEKVRSPKEPETPTELYTKERHVLVTGDANYVDPRFY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 GAPEDVPDGGQISKGFGKLYRKVKEKVRSPKEPETPTELYTKERHVLVTGDANYVDPRFY 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE6 VSSITAKGGVAVSVAEDSVLYDGQVEPSPESPKPPLENGQVGLQEKEDGQPIDQQPIDKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 VSSITAKGGVAVSVAEDSVLYDGQVEPSPESPKPPLENGQVGLQEKEDGQPIDQQPIDKE 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE6 IEPDGAELEGPEEKREGEERDEESRRPCAMVTPGAEEPSIPEPPKPAADQDGAEVLGTRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 IEPDGAELEGPEEKREGEERDEESRRPCAMVTPGAEEPSIPEPPKPAADQDGAEVLGTRS 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE6 RSLPEKGPPKALAYKTVEVVESIEKISTESIQTYEETAVIVETMIGKTKSDKKKSGEKSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 RSLPEKGPPKALAYKTVEVVESIEKISTESIQTYEETAVIVETMIGKTKSDKKKSGEKSS 490 500 510 520 530 540 >>CCDS13126.1 BFSP1 gene_id:631|Hs108|chr20 (665 aa) initn: 3445 init1: 3445 opt: 3445 Z-score: 2358.1 bits: 446.4 E(32554): 5e-125 Smith-Waterman score: 3445; 100.0% identity (100.0% similar) in 539 aa overlap (2-540:127-665) 10 20 30 pF1KE6 MYENECECQLLLKEMLERLNKEADEALLHNL :::::::::::::::::::::::::::::: CCDS13 QRVRDLEAERARLERQGTEAQRALDEFRSKYENECECQLLLKEMLERLNKEADEALLHNL 100 110 120 130 140 150 40 50 60 70 80 90 pF1KE6 RLQLEAQFLQDDISAAKDRHKKNLLEVQTYISILQQIIHTTPPASIVTSGMREEKLLTER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 RLQLEAQFLQDDISAAKDRHKKNLLEVQTYISILQQIIHTTPPASIVTSGMREEKLLTER 160 170 180 190 200 210 100 110 120 130 140 150 pF1KE6 EVAALRSQLEEGREVLSHLQAQRVELQAQTTTLEQAIKSAHECYDDEIQLYNEQIETLRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 EVAALRSQLEEGREVLSHLQAQRVELQAQTTTLEQAIKSAHECYDDEIQLYNEQIETLRK 220 230 240 250 260 270 160 170 180 190 200 210 pF1KE6 EIEETERVLEKSSYDCRQLAVAQQTLKNELDRYHRIIEIEGNRLTSAFIETPIPLFTQSH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 EIEETERVLEKSSYDCRQLAVAQQTLKNELDRYHRIIEIEGNRLTSAFIETPIPLFTQSH 280 290 300 310 320 330 220 230 240 250 260 270 pF1KE6 GVSLSTGSGGKDLTRALQDITAAKPRQKALPKNVPRRKEIITKDKTNGALEDAPLKGLED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 GVSLSTGSGGKDLTRALQDITAAKPRQKALPKNVPRRKEIITKDKTNGALEDAPLKGLED 340 350 360 370 380 390 280 290 300 310 320 330 pF1KE6 TKLVQVVLKEESESKFESESKEVSPLTQEGAPEDVPDGGQISKGFGKLYRKVKEKVRSPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 TKLVQVVLKEESESKFESESKEVSPLTQEGAPEDVPDGGQISKGFGKLYRKVKEKVRSPK 400 410 420 430 440 450 340 350 360 370 380 390 pF1KE6 EPETPTELYTKERHVLVTGDANYVDPRFYVSSITAKGGVAVSVAEDSVLYDGQVEPSPES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 EPETPTELYTKERHVLVTGDANYVDPRFYVSSITAKGGVAVSVAEDSVLYDGQVEPSPES 460 470 480 490 500 510 400 410 420 430 440 450 pF1KE6 PKPPLENGQVGLQEKEDGQPIDQQPIDKEIEPDGAELEGPEEKREGEERDEESRRPCAMV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 PKPPLENGQVGLQEKEDGQPIDQQPIDKEIEPDGAELEGPEEKREGEERDEESRRPCAMV 520 530 540 550 560 570 460 470 480 490 500 510 pF1KE6 TPGAEEPSIPEPPKPAADQDGAEVLGTRSRSLPEKGPPKALAYKTVEVVESIEKISTESI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 TPGAEEPSIPEPPKPAADQDGAEVLGTRSRSLPEKGPPKALAYKTVEVVESIEKISTESI 580 590 600 610 620 630 520 530 540 pF1KE6 QTYEETAVIVETMIGKTKSDKKKSGEKSS ::::::::::::::::::::::::::::: CCDS13 QTYEETAVIVETMIGKTKSDKKKSGEKSS 640 650 660 >>CCDS63229.1 BFSP1 gene_id:631|Hs108|chr20 (526 aa) initn: 3352 init1: 3352 opt: 3352 Z-score: 2296.3 bits: 434.6 E(32554): 1.4e-121 Smith-Waterman score: 3352; 100.0% identity (100.0% similar) in 526 aa overlap (15-540:1-526) 10 20 30 40 50 60 pF1KE6 MYENECECQLLLKEMLERLNKEADEALLHNLRLQLEAQFLQDDISAAKDRHKKNLLEVQT :::::::::::::::::::::::::::::::::::::::::::::: CCDS63 MLERLNKEADEALLHNLRLQLEAQFLQDDISAAKDRHKKNLLEVQT 10 20 30 40 70 80 90 100 110 120 pF1KE6 YISILQQIIHTTPPASIVTSGMREEKLLTEREVAALRSQLEEGREVLSHLQAQRVELQAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS63 YISILQQIIHTTPPASIVTSGMREEKLLTEREVAALRSQLEEGREVLSHLQAQRVELQAQ 50 60 70 80 90 100 130 140 150 160 170 180 pF1KE6 TTTLEQAIKSAHECYDDEIQLYNEQIETLRKEIEETERVLEKSSYDCRQLAVAQQTLKNE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS63 TTTLEQAIKSAHECYDDEIQLYNEQIETLRKEIEETERVLEKSSYDCRQLAVAQQTLKNE 110 120 130 140 150 160 190 200 210 220 230 240 pF1KE6 LDRYHRIIEIEGNRLTSAFIETPIPLFTQSHGVSLSTGSGGKDLTRALQDITAAKPRQKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS63 LDRYHRIIEIEGNRLTSAFIETPIPLFTQSHGVSLSTGSGGKDLTRALQDITAAKPRQKA 170 180 190 200 210 220 250 260 270 280 290 300 pF1KE6 LPKNVPRRKEIITKDKTNGALEDAPLKGLEDTKLVQVVLKEESESKFESESKEVSPLTQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS63 LPKNVPRRKEIITKDKTNGALEDAPLKGLEDTKLVQVVLKEESESKFESESKEVSPLTQE 230 240 250 260 270 280 310 320 330 340 350 360 pF1KE6 GAPEDVPDGGQISKGFGKLYRKVKEKVRSPKEPETPTELYTKERHVLVTGDANYVDPRFY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS63 GAPEDVPDGGQISKGFGKLYRKVKEKVRSPKEPETPTELYTKERHVLVTGDANYVDPRFY 290 300 310 320 330 340 370 380 390 400 410 420 pF1KE6 VSSITAKGGVAVSVAEDSVLYDGQVEPSPESPKPPLENGQVGLQEKEDGQPIDQQPIDKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS63 VSSITAKGGVAVSVAEDSVLYDGQVEPSPESPKPPLENGQVGLQEKEDGQPIDQQPIDKE 350 360 370 380 390 400 430 440 450 460 470 480 pF1KE6 IEPDGAELEGPEEKREGEERDEESRRPCAMVTPGAEEPSIPEPPKPAADQDGAEVLGTRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS63 IEPDGAELEGPEEKREGEERDEESRRPCAMVTPGAEEPSIPEPPKPAADQDGAEVLGTRS 410 420 430 440 450 460 490 500 510 520 530 540 pF1KE6 RSLPEKGPPKALAYKTVEVVESIEKISTESIQTYEETAVIVETMIGKTKSDKKKSGEKSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS63 RSLPEKGPPKALAYKTVEVVESIEKISTESIQTYEETAVIVETMIGKTKSDKKKSGEKSS 470 480 490 500 510 520 540 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 16:16:46 2016 done: Tue Nov 8 16:16:46 2016 Total Scan time: 3.760 Total Display time: 0.030 Function used was FASTA [36.3.4 Apr, 2011]