FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6583, 117 aa 1>>>pF1KE6583 117 - 117 aa - 117 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.0236+/-0.00046; mu= 13.9074+/- 0.028 mean_var=75.0462+/-14.855, 0's: 0 Z-trim(117.5): 3 B-trim: 3 in 1/54 Lambda= 0.148051 statistics sampled from 18314 (18316) to 18314 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.862), E-opt: 0.2 (0.563), width: 16 Scan time: 1.660 The best scores are: opt bits E(32554) CCDS12803.1 C19orf48 gene_id:84798|Hs108|chr19 ( 117) 839 186.5 3.2e-48 >>CCDS12803.1 C19orf48 gene_id:84798|Hs108|chr19 (117 aa) initn: 839 init1: 839 opt: 839 Z-score: 979.3 bits: 186.5 E(32554): 3.2e-48 Smith-Waterman score: 839; 100.0% identity (100.0% similar) in 117 aa overlap (1-117:1-117) 10 20 30 40 50 60 pF1KE6 MTVLEAVLEIQAITGSRLLSMVPGPARPPGSCWDPTQCTRTWLLSHTPRRRWISGLPRAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 MTVLEAVLEIQAITGSRLLSMVPGPARPPGSCWDPTQCTRTWLLSHTPRRRWISGLPRAS 10 20 30 40 50 60 70 80 90 100 110 pF1KE6 CRLGEEPPPLPYCDQAYGEELSIRHRETWAWLSRTDTAWPGAPGVKQARILGELLLV ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 CRLGEEPPPLPYCDQAYGEELSIRHRETWAWLSRTDTAWPGAPGVKQARILGELLLV 70 80 90 100 110 117 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 14:35:06 2016 done: Tue Nov 8 14:35:06 2016 Total Scan time: 1.660 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]