FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6566, 184 aa 1>>>pF1KE6566 184 - 184 aa - 184 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.8338+/-0.000286; mu= 15.2877+/- 0.018 mean_var=59.6568+/-12.016, 0's: 0 Z-trim(117.4): 3 B-trim: 0 in 0/51 Lambda= 0.166052 statistics sampled from 29284 (29287) to 29284 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.739), E-opt: 0.2 (0.343), width: 16 Scan time: 5.170 The best scores are: opt bits E(85289) NP_006699 (OMIM: 138750) lactoylglutathione lyase ( 184) 1269 311.7 4.2e-85 >>NP_006699 (OMIM: 138750) lactoylglutathione lyase [Hom (184 aa) initn: 1269 init1: 1269 opt: 1269 Z-score: 1648.9 bits: 311.7 E(85289): 4.2e-85 Smith-Waterman score: 1269; 100.0% identity (100.0% similar) in 184 aa overlap (1-184:1-184) 10 20 30 40 50 60 pF1KE6 MAEPQPPSGGLTDEAALSCCSDADPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 MAEPQPPSGGLTDEAALSCCSDADPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 CDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDETQSYHNGNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 CDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDETQSYHNGNS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 DPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPNKM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 DPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPNKM 130 140 150 160 170 180 pF1KE6 ATLM :::: NP_006 ATLM 184 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 14:28:04 2016 done: Tue Nov 8 14:28:05 2016 Total Scan time: 5.170 Total Display time: -0.040 Function used was FASTA [36.3.4 Apr, 2011]