Result of FASTA (ccds) for
pFN21AE6556
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6556, 154 aa
1>>>pF1KE6556 154 - 154 aa - 154 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.8751+/-0.000649; mu= 14.1400+/- 0.039
mean_var=63.2303+/-12.262, 0's: 0 Z-trim(110.4): 99 B-trim: 6 in 1/49
Lambda= 0.161291
statistics sampled from 11504 (11613) to 11504 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.746), E-opt: 0.2 (0.357), width: 16
Scan time: 1.090
The best scores are: opt bits E(32554)
CCDS8602.1 CLEC2D gene_id:29121|Hs108|chr12 ( 191) 1100 263.9 3.5e-71
CCDS31741.1 CLEC2D gene_id:29121|Hs108|chr12 ( 194) 1100 263.9 3.6e-71
CCDS55800.1 CLEC2D gene_id:29121|Hs108|chr12 ( 132) 829 200.7 2.5e-52
CCDS55801.1 CLEC2D gene_id:29121|Hs108|chr12 ( 154) 722 175.9 8.9e-45
CCDS55802.1 CLEC2D gene_id:29121|Hs108|chr12 ( 95) 451 112.6 5.9e-26
CCDS8606.1 CLEC2A gene_id:387836|Hs108|chr12 ( 160) 379 96.1 9.8e-21
CCDS44829.1 CLEC2A gene_id:387836|Hs108|chr12 ( 174) 379 96.1 1e-20
CCDS8604.1 CD69 gene_id:969|Hs108|chr12 ( 199) 358 91.2 3.4e-19
CCDS8605.1 CLEC2B gene_id:9976|Hs108|chr12 ( 149) 314 80.9 3.3e-16
CCDS56087.1 CLEC17A gene_id:388512|Hs108|chr19 ( 378) 259 68.4 4.9e-12
CCDS56017.1 ASGR1 gene_id:432|Hs108|chr17 ( 252) 253 66.9 9.4e-12
CCDS11089.1 ASGR1 gene_id:432|Hs108|chr17 ( 291) 253 66.9 1e-11
CCDS45597.1 CLEC10A gene_id:10462|Hs108|chr17 ( 292) 253 66.9 1e-11
CCDS47724.1 CLEC2L gene_id:154790|Hs108|chr7 ( 214) 244 64.7 3.5e-11
CCDS11088.1 ASGR2 gene_id:433|Hs108|chr17 ( 287) 241 64.1 7.2e-11
CCDS45598.1 ASGR2 gene_id:433|Hs108|chr17 ( 292) 241 64.1 7.3e-11
CCDS32544.1 ASGR2 gene_id:433|Hs108|chr17 ( 311) 241 64.1 7.6e-11
>>CCDS8602.1 CLEC2D gene_id:29121|Hs108|chr12 (191 aa)
initn: 1100 init1: 1100 opt: 1100 Z-score: 1391.4 bits: 263.9 E(32554): 3.5e-71
Smith-Waterman score: 1100; 99.4% identity (100.0% similar) in 154 aa overlap (1-154:1-154)
10 20 30 40 50 60
pF1KE6 MHDSNNVEKDITPSELPANPGCVHSKEHSIKATLIWRLFFLIMFLTIIVCGMVAALSAIR
::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::
CCDS86 MHDSNNVEKDITPSELPANPGCLHSKEHSIKATLIWRLFFLIMFLTIIVCGMVAALSAIR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 ANCHQEPSVCLQAACPESWIGFQRKCFYFSDDTKNWTSSQRFCDSQDADLAQVESFQELN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS86 ANCHQEPSVCLQAACPESWIGFQRKCFYFSDDTKNWTSSQRFCDSQDADLAQVESFQELN
70 80 90 100 110 120
130 140 150
pF1KE6 FLLRYKGPSDHWIGLSREQGQPWKWINGTEWTRQ
::::::::::::::::::::::::::::::::::
CCDS86 FLLRYKGPSDHWIGLSREQGQPWKWINGTEWTRQFPILGAGECAYLNDKGASSARHYTER
130 140 150 160 170 180
CCDS86 KWICSKSDIHV
190
>>CCDS31741.1 CLEC2D gene_id:29121|Hs108|chr12 (194 aa)
initn: 1100 init1: 1100 opt: 1100 Z-score: 1391.3 bits: 263.9 E(32554): 3.6e-71
Smith-Waterman score: 1100; 99.4% identity (100.0% similar) in 154 aa overlap (1-154:1-154)
10 20 30 40 50 60
pF1KE6 MHDSNNVEKDITPSELPANPGCVHSKEHSIKATLIWRLFFLIMFLTIIVCGMVAALSAIR
::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::
CCDS31 MHDSNNVEKDITPSELPANPGCLHSKEHSIKATLIWRLFFLIMFLTIIVCGMVAALSAIR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 ANCHQEPSVCLQAACPESWIGFQRKCFYFSDDTKNWTSSQRFCDSQDADLAQVESFQELN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 ANCHQEPSVCLQAACPESWIGFQRKCFYFSDDTKNWTSSQRFCDSQDADLAQVESFQELN
70 80 90 100 110 120
130 140 150
pF1KE6 FLLRYKGPSDHWIGLSREQGQPWKWINGTEWTRQ
::::::::::::::::::::::::::::::::::
CCDS31 FLLRYKGPSDHWIGLSREQGQPWKWINGTEWTRQLVMKEDGANLYVAKVSQVPRMNPRPV
130 140 150 160 170 180
CCDS31 MVSYPGSRRVCLFE
190
>>CCDS55800.1 CLEC2D gene_id:29121|Hs108|chr12 (132 aa)
initn: 829 init1: 829 opt: 829 Z-score: 1052.9 bits: 200.7 E(32554): 2.5e-52
Smith-Waterman score: 829; 99.2% identity (100.0% similar) in 119 aa overlap (1-119:1-119)
10 20 30 40 50 60
pF1KE6 MHDSNNVEKDITPSELPANPGCVHSKEHSIKATLIWRLFFLIMFLTIIVCGMVAALSAIR
::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::
CCDS55 MHDSNNVEKDITPSELPANPGCLHSKEHSIKATLIWRLFFLIMFLTIIVCGMVAALSAIR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 ANCHQEPSVCLQAACPESWIGFQRKCFYFSDDTKNWTSSQRFCDSQDADLAQVESFQELN
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 ANCHQEPSVCLQAACPESWIGFQRKCFYFSDDTKNWTSSQRFCDSQDADLAQVESFQELV
70 80 90 100 110 120
130 140 150
pF1KE6 FLLRYKGPSDHWIGLSREQGQPWKWINGTEWTRQ
CCDS55 SYPGSRRVCLFE
130
>>CCDS55801.1 CLEC2D gene_id:29121|Hs108|chr12 (154 aa)
initn: 845 init1: 722 opt: 722 Z-score: 917.4 bits: 175.9 E(32554): 8.9e-45
Smith-Waterman score: 775; 76.0% identity (76.0% similar) in 154 aa overlap (1-154:1-117)
10 20 30 40 50 60
pF1KE6 MHDSNNVEKDITPSELPANPGCVHSKEHSIKATLIWRLFFLIMFLTIIVCGMVAALSAIR
:::::::::::::::::::: :::
CCDS55 MHDSNNVEKDITPSELPANP-------------------------------------AIR
10 20
70 80 90 100 110 120
pF1KE6 ANCHQEPSVCLQAACPESWIGFQRKCFYFSDDTKNWTSSQRFCDSQDADLAQVESFQELN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 ANCHQEPSVCLQAACPESWIGFQRKCFYFSDDTKNWTSSQRFCDSQDADLAQVESFQELN
30 40 50 60 70 80
130 140 150
pF1KE6 FLLRYKGPSDHWIGLSREQGQPWKWINGTEWTRQ
::::::::::::::::::::::::::::::::::
CCDS55 FLLRYKGPSDHWIGLSREQGQPWKWINGTEWTRQFPILGAGECAYLNDKGASSARHYTER
90 100 110 120 130 140
CCDS55 KWICSKSDIHV
150
>>CCDS55802.1 CLEC2D gene_id:29121|Hs108|chr12 (95 aa)
initn: 574 init1: 451 opt: 451 Z-score: 579.5 bits: 112.6 E(32554): 5.9e-26
Smith-Waterman score: 504; 68.9% identity (68.9% similar) in 119 aa overlap (1-119:1-82)
10 20 30 40 50 60
pF1KE6 MHDSNNVEKDITPSELPANPGCVHSKEHSIKATLIWRLFFLIMFLTIIVCGMVAALSAIR
:::::::::::::::::::: :::
CCDS55 MHDSNNVEKDITPSELPANP-------------------------------------AIR
10 20
70 80 90 100 110 120
pF1KE6 ANCHQEPSVCLQAACPESWIGFQRKCFYFSDDTKNWTSSQRFCDSQDADLAQVESFQELN
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 ANCHQEPSVCLQAACPESWIGFQRKCFYFSDDTKNWTSSQRFCDSQDADLAQVESFQELV
30 40 50 60 70 80
130 140 150
pF1KE6 FLLRYKGPSDHWIGLSREQGQPWKWINGTEWTRQ
CCDS55 SYPGSRRVCLFE
90
>>CCDS8606.1 CLEC2A gene_id:387836|Hs108|chr12 (160 aa)
initn: 366 init1: 351 opt: 379 Z-score: 485.8 bits: 96.1 E(32554): 9.8e-21
Smith-Waterman score: 379; 46.0% identity (69.4% similar) in 124 aa overlap (28-149:16-132)
10 20 30 40 50
pF1KE6 MHDSNNVEKDITPSELPANPGCVHSKEHSIKATLI--WRLFFLIMFLTIIVCGMVAALSA
: : :: :.. :. ::.::. . . :
CCDS86 MINPELRDGRADGFIHRIVPKLIQNWKIG-LMCFLSIIITTVCIIMIA
10 20 30 40
60 70 80 90 100 110
pF1KE6 IRANCHQEPSVCLQAACPESWIGFQRKCFYFSDDTKNWTSSQRFCDSQDADLAQVESFQE
.. : .: .:: .:.: . :::::::::.:::.:. ::. : :.:::... ..
CCDS86 TWSK-HAKP-----VACSGDWLGVRDKCFYFSDDTRNWTASKIFCSLQKAELAQIDTQED
50 60 70 80 90 100
120 130 140 150
pF1KE6 LNFLLRYKGPSDHWIGLSREQGQPWKWINGTEWTRQ
..:: :: : . :::::::.::. ::: :::
CCDS86 MEFLKRYAGTDMHWIGLSRKQGDSWKWTNGTTFNGWPSNSKWSCNWSLRQWLLLLGPLR
110 120 130 140 150 160
>>CCDS44829.1 CLEC2A gene_id:387836|Hs108|chr12 (174 aa)
initn: 366 init1: 351 opt: 379 Z-score: 485.3 bits: 96.1 E(32554): 1e-20
Smith-Waterman score: 379; 46.0% identity (69.4% similar) in 124 aa overlap (28-149:16-132)
10 20 30 40 50
pF1KE6 MHDSNNVEKDITPSELPANPGCVHSKEHSIKATLI--WRLFFLIMFLTIIVCGMVAALSA
: : :: :.. :. ::.::. . . :
CCDS44 MINPELRDGRADGFIHRIVPKLIQNWKIG-LMCFLSIIITTVCIIMIA
10 20 30 40
60 70 80 90 100 110
pF1KE6 IRANCHQEPSVCLQAACPESWIGFQRKCFYFSDDTKNWTSSQRFCDSQDADLAQVESFQE
.. : .: .:: .:.: . :::::::::.:::.:. ::. : :.:::... ..
CCDS44 TWSK-HAKP-----VACSGDWLGVRDKCFYFSDDTRNWTASKIFCSLQKAELAQIDTQED
50 60 70 80 90 100
120 130 140 150
pF1KE6 LNFLLRYKGPSDHWIGLSREQGQPWKWINGTEWTRQ
..:: :: : . :::::::.::. ::: :::
CCDS44 MEFLKRYAGTDMHWIGLSRKQGDSWKWTNGTTFNGWFEIIGNGSFAFLSADGVHSSRGFI
110 120 130 140 150 160
CCDS44 DIKWICSKPKYFL
170
>>CCDS8604.1 CD69 gene_id:969|Hs108|chr12 (199 aa)
initn: 375 init1: 326 opt: 358 Z-score: 458.0 bits: 91.2 E(32554): 3.4e-19
Smith-Waterman score: 358; 40.9% identity (71.3% similar) in 115 aa overlap (42-151:48-161)
20 30 40 50 60
pF1KE6 TPSELPANPGCVHSKEHSIKATLIWRLFFLIMFLTIIVCGMVAALSAIRANCHQE-----
..:.::.. ...: ::. . :: .
CCDS86 SGQENDATSPHFSTRHEGSFQVPVLCAVMNVVFITILIIALIA-LSVGQYNCPGQYTFSM
20 30 40 50 60 70
70 80 90 100 110 120
pF1KE6 PSVCLQAACPESWIGFQRKCFYFSDDTKNWTSSQRFCDSQDADLAQVESFQELNFLLRYK
:: ..: :.:.:.::::...: ..:::.: :. . : :: ..: ...::: ::
CCDS86 PSDSHVSSCSEDWVGYQRKCYFISTVKRSWTSAQNACSEHGATLAVIDSEKDMNFLKRYA
80 90 100 110 120 130
130 140 150
pF1KE6 GPSDHWIGLSREQGQPWKWINGTEWTRQ
: .::.::..: :.:::: :: :.
CCDS86 GREEHWVGLKKEPGHPWKWSNGKEFNNWFNVTGSDKCVFLKNTEVSSMECEKNLYWICNK
140 150 160 170 180 190
>>CCDS8605.1 CLEC2B gene_id:9976|Hs108|chr12 (149 aa)
initn: 352 init1: 308 opt: 314 Z-score: 404.5 bits: 80.9 E(32554): 3.3e-16
Smith-Waterman score: 314; 46.3% identity (78.0% similar) in 82 aa overlap (72-153:32-113)
50 60 70 80 90 100
pF1KE6 IMFLTIIVCGMVAALSAIRANCHQEPSVCLQAACPESWIGFQRKCFYFSDDTKNWTSSQR
:. :: .::::: ::.::: . .:.::.
CCDS86 MTKHKKCFIIVGVLITTNIITLIVKLTRDSQSLCPYDWIGFQNKCYYFSKEEGDWNSSKY
10 20 30 40 50 60
110 120 130 140 150
pF1KE6 FCDSQDADLAQVESFQELNFLLRYKGPSDHWIGLSREQGQPWKWINGTEWTRQ
:..: :::. .....:.::: ::: :::::::. ... .:..:. .:.
CCDS86 NCSTQHADLTIIDNIEEMNFLRRYKCSSDHWIGLKMAKNRTGQWVDGATFTKSFGMRGSE
70 80 90 100 110 120
CCDS86 GCAYLSDDGAATARCYTERKWICRKRIH
130 140
>>CCDS56087.1 CLEC17A gene_id:388512|Hs108|chr19 (378 aa)
initn: 228 init1: 180 opt: 259 Z-score: 329.6 bits: 68.4 E(32554): 4.9e-12
Smith-Waterman score: 259; 38.8% identity (69.4% similar) in 85 aa overlap (70-152:249-333)
40 50 60 70 80 90
pF1KE6 FLIMFLTIIVCGMVAALSAIRANCHQEPSVCLQAACPESWIGFQRKCFYFSDDTKNWTSS
: . .:::.:. :. ::.::: .::.: .
CCDS56 MAGLAGLKHDIARVRADTNQSLVELWGLLDCRRITCPEGWLPFEGKCYYFSPSTKSWDEA
220 230 240 250 260 270
100 110 120 130 140 150
pF1KE6 QRFCDSQDADLAQVESFQELNFLLRYKG-PSDHWIGLS-REQGQPWKWINGTEWTRQ
. ::. . . :. ..:: : ::. . .: : .:.::. : : :.:..:. :
CCDS56 RMFCQENYSHLVIINSFAEHNFVAKAHGSPRVYWLGLNDRAQEGDWRWLDGSPVTLSFWE
280 290 300 310 320 330
CCDS56 PEEPNNIHDEDCATMNKGGTWNDLSCYKTTYWICERKCSC
340 350 360 370
154 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 14:23:01 2016 done: Tue Nov 8 14:23:02 2016
Total Scan time: 1.090 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]