FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2753, 69 aa 1>>>pF1KE2753 69 - 69 aa - 69 aa Library: human.CCDS.faa 18921897 residues in 33420 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.4107+/-0.000472; mu= 10.6135+/- 0.028 mean_var=45.1740+/- 8.936, 0's: 0 Z-trim(113.4): 16 B-trim: 70 in 1/51 Lambda= 0.190823 statistics sampled from 14189 (14201) to 14189 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.826), E-opt: 0.2 (0.425), width: 16 Scan time: 0.700 The best scores are: opt bits E(33420) CCDS42457.1 GPX4 gene_id:2879|Hs109|chr19 ( 197) 505 145.5 7.3e-36 >>CCDS42457.1 GPX4 gene_id:2879|Hs109|chr19 (197 aa) initn: 505 init1: 505 opt: 505 Z-score: 757.6 bits: 145.5 E(33420): 7.3e-36 Smith-Waterman score: 505; 100.0% identity (100.0% similar) in 69 aa overlap (1-69:129-197) 10 20 30 pF1KE2 MFSKICVNGDDAHPLWKWMKIQPKGKGILG :::::::::::::::::::::::::::::: CCDS42 AFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILG 100 110 120 130 140 150 40 50 60 pF1KE2 NAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPHYF ::::::::::::::::::::::::::::::::::::::: CCDS42 NAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPHYF 160 170 180 190 69 residues in 1 query sequences 18921897 residues in 33420 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Jun 30 14:55:32 2019 done: Sun Jun 30 14:55:32 2019 Total Scan time: 0.700 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]