FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6536, 71 aa 1>>>pF1KE6536 71 - 71 aa - 71 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.5702+/-0.000595; mu= 9.9563+/- 0.036 mean_var=42.8410+/- 8.909, 0's: 0 Z-trim(109.2): 10 B-trim: 0 in 0/50 Lambda= 0.195950 statistics sampled from 10724 (10726) to 10724 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.731), E-opt: 0.2 (0.329), width: 16 Scan time: 1.210 The best scores are: opt bits E(32554) CCDS9088.1 GNPTAB gene_id:79158|Hs108|chr12 (1256) 460 136.9 1.8e-32 >>CCDS9088.1 GNPTAB gene_id:79158|Hs108|chr12 (1256 aa) initn: 460 init1: 460 opt: 460 Z-score: 696.4 bits: 136.9 E(32554): 1.8e-32 Smith-Waterman score: 460; 100.0% identity (100.0% similar) in 68 aa overlap (1-68:1-68) 10 20 30 40 50 60 pF1KE6 MLFKLLQRQTYTCLSHRYGLYVCFLGVVVTIVSAFQFGEVVLEWSRDQYHVLFDSYRDNI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS90 MLFKLLQRQTYTCLSHRYGLYVCFLGVVVTIVSAFQFGEVVLEWSRDQYHVLFDSYRDNI 10 20 30 40 50 60 70 pF1KE6 AGKSFQNRSVR :::::::: CCDS90 AGKSFQNRLCLPMPIDVVYTWVNGTDLELLKELQQVREQMEEEQKAMREILGKNTTEPTK 70 80 90 100 110 120 71 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 14:12:28 2016 done: Tue Nov 8 14:12:28 2016 Total Scan time: 1.210 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]