FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5574, 454 aa 1>>>pF1KE5574 454 - 454 aa - 454 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.8463+/-0.000908; mu= 10.1463+/- 0.054 mean_var=119.1908+/-23.811, 0's: 0 Z-trim(109.0): 137 B-trim: 2 in 1/51 Lambda= 0.117477 statistics sampled from 10417 (10581) to 10417 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.702), E-opt: 0.2 (0.325), width: 16 Scan time: 2.820 The best scores are: opt bits E(32554) CCDS53966.1 IL16 gene_id:3603|Hs108|chr15 (1331) 2928 507.8 2.6e-143 CCDS42069.1 IL16 gene_id:3603|Hs108|chr15 (1332) 2928 507.8 2.6e-143 CCDS34137.1 PDZD2 gene_id:23037|Hs108|chr5 (2839) 759 140.4 2.2e-32 >>CCDS53966.1 IL16 gene_id:3603|Hs108|chr15 (1331 aa) initn: 3098 init1: 2928 opt: 2928 Z-score: 2686.3 bits: 507.8 E(32554): 2.6e-143 Smith-Waterman score: 2928; 98.5% identity (99.1% similar) in 452 aa overlap (1-452:1-452) 10 20 30 40 50 60 pF1KE5 MESHSRAGKSRKSAKFRSISRSLMLCNAKTSDDGSSPDEKYPDPFEISLAQGKEGIFHSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 MESHSRAGKSRKSAKFRSISRSLMLCNAKTSDDGSSPDEKYPDPFEISLAQGKEGIFHSS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 VQLADTSEAGPSSVPDLALASEAAQLQAAGNDRGKTCRRIFFMKESSTASSREKPGKLEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 VQLADTSEAGPSSVPDLALASEAAQLQAAGNDRGKTCRRIFFMKESSTASSREKPGKLEA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 QSSNFLFPKACHQRARSNSTSVNPYCTREIDFPMTKKSAAPTDRQPYSLCSNRKSLSQQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 QSSNFLFPKACHQRARSNSTSVNPYCTREIDFPMTKKSAAPTDRQPYSLCSNRKSLSQQL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 DCPAGKAAGTSRPTRSLSTAQLVQPSGGLQASVISNIVLMKGQAKGLGFSIVGGKDSIYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 DCPAGKAAGTSRPTRSLSTAQLVQPSGGLQASVISNIVLMKGQAKGLGFSIVGGKDSIYG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 PIGIYVKTIFAGGAAAADGRLQEGDEILELNGESMAGLTHQDALQKFKQAKKGLLTLTVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 PIGIYVKTIFAGGAAAADGRLQEGDEILELNGESMAGLTHQDALQKFKQAKKGLLTLTVR 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 TRLTAPPSLCSHLSPPLCRSLSSSTCITKDSSSFALESPSAPISTAKPNYRIMVEVSLQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 TRLTAPPSLCSHLSPPLCRSLSSSTCITKDSSSFALESPSAPISTAKPNYRIMVEVSLQK 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 EAGVGLGIGLCSVPYFQCISGIFVHTLSPGSVAHLDGRLRCGDEIVEISDSPVHCLTLNE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 EAGVGLGIGLCSVPYFQCISGIFVHTLSPGSVAHLDGRLRCGDEIVEISDSPVHCLTLNE 370 380 390 400 410 420 430 440 450 pF1KE5 VYTILSHCDPGPVSIIVSRHPDPQKEEMEAQEVK ::::::::::::: :::::::::: :.. .: CCDS53 VYTILSHCDPGPVPIIVSRHPDPQVSEQQLKEAVAQAVENTKFGKERHQWSLEGVKRLES 430 440 450 460 470 480 CCDS53 SWHGRPTLEKEREKNSAPPHRRAQKVMIRSSSDSSYMSGSPGGSPGSGSAEKPSSDVDIS 490 500 510 520 530 540 >>CCDS42069.1 IL16 gene_id:3603|Hs108|chr15 (1332 aa) initn: 3098 init1: 2928 opt: 2928 Z-score: 2686.3 bits: 507.8 E(32554): 2.6e-143 Smith-Waterman score: 2928; 98.5% identity (99.1% similar) in 452 aa overlap (1-452:1-452) 10 20 30 40 50 60 pF1KE5 MESHSRAGKSRKSAKFRSISRSLMLCNAKTSDDGSSPDEKYPDPFEISLAQGKEGIFHSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 MESHSRAGKSRKSAKFRSISRSLMLCNAKTSDDGSSPDEKYPDPFEISLAQGKEGIFHSS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 VQLADTSEAGPSSVPDLALASEAAQLQAAGNDRGKTCRRIFFMKESSTASSREKPGKLEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 VQLADTSEAGPSSVPDLALASEAAQLQAAGNDRGKTCRRIFFMKESSTASSREKPGKLEA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 QSSNFLFPKACHQRARSNSTSVNPYCTREIDFPMTKKSAAPTDRQPYSLCSNRKSLSQQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 QSSNFLFPKACHQRARSNSTSVNPYCTREIDFPMTKKSAAPTDRQPYSLCSNRKSLSQQL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 DCPAGKAAGTSRPTRSLSTAQLVQPSGGLQASVISNIVLMKGQAKGLGFSIVGGKDSIYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 DCPAGKAAGTSRPTRSLSTAQLVQPSGGLQASVISNIVLMKGQAKGLGFSIVGGKDSIYG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 PIGIYVKTIFAGGAAAADGRLQEGDEILELNGESMAGLTHQDALQKFKQAKKGLLTLTVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 PIGIYVKTIFAGGAAAADGRLQEGDEILELNGESMAGLTHQDALQKFKQAKKGLLTLTVR 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 TRLTAPPSLCSHLSPPLCRSLSSSTCITKDSSSFALESPSAPISTAKPNYRIMVEVSLQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 TRLTAPPSLCSHLSPPLCRSLSSSTCITKDSSSFALESPSAPISTAKPNYRIMVEVSLQK 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 EAGVGLGIGLCSVPYFQCISGIFVHTLSPGSVAHLDGRLRCGDEIVEISDSPVHCLTLNE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 EAGVGLGIGLCSVPYFQCISGIFVHTLSPGSVAHLDGRLRCGDEIVEISDSPVHCLTLNE 370 380 390 400 410 420 430 440 450 pF1KE5 VYTILSHCDPGPVSIIVSRHPDPQKEEMEAQEVK ::::::::::::: :::::::::: :.. .: CCDS42 VYTILSHCDPGPVPIIVSRHPDPQVSEQQLKEAVAQAVENTKFGKERHQWSLEGVKRLES 430 440 450 460 470 480 CCDS42 SWHGRPTLEKEREKNSAPPHRRAQKVMIRSSSDSSYMSGSPGGSPGSGSAEKPSSDVDIS 490 500 510 520 530 540 >>CCDS34137.1 PDZD2 gene_id:23037|Hs108|chr5 (2839 aa) initn: 739 init1: 415 opt: 759 Z-score: 694.8 bits: 140.4 E(32554): 2.2e-32 Smith-Waterman score: 759; 38.3% identity (66.4% similar) in 405 aa overlap (66-453:429-826) 40 50 60 70 80 90 pF1KE5 SPDEKYPDPFEISLAQGKEGIFHSSVQLADTSEAGP---SSVPDLALASEAAQLQAAGN- ::.. : ::: :.. .. . .: :. CCDS34 EAVAILRSATGMVQLVVASKENSAEDLLRLTSKSLPDLTSSVEDVSSWTDNEDQEADGEE 400 410 420 430 440 450 100 110 120 130 140 pF1KE5 DRGKTCRRIFFM----KESSTASSREKPGKLEA--QSSNFLFPKACHQRARSNSTSVNPY :.: . : . ... ...:. :.::. :.:: . :. . . ::. : CCDS34 DEGTSSSVQRAMPGTDEPQDVCGAEESKGNLESPKQGSNKIKLKSRLSGGVHRLESVEEY 460 470 480 490 500 510 150 160 170 180 190 200 pF1KE5 CTREIDFPMTKKSAAPTDRQPYSLCSNRK-SLSQQLDCPAGKAAG--TSRPTRSLSTAQL . ... : :. ..:: :: : :: ... ... ::::::.:. CCDS34 NELMV------RNGDPRIRMLEVSRDGRKHSLPQLLDSSSASQEYHIVKKSTRSLSTTQV 520 530 540 550 560 570 210 220 230 240 250 260 pF1KE5 VQPSGGLQASVISNIVLMKGQAKGLGFSIVGGKDSIYGPIGIYVKTIFAGGAAAADGRLQ .: .. :::: : :.: ..:::::::.::.: : : .::.::::: .:.:: ::::. CCDS34 ESPWRLIRPSVISIIGLYKEKGKGLGFSIAGGRDCIRGQMGIFVKTIFPNGSAAEDGRLK 580 590 600 610 620 630 270 280 290 300 310 pF1KE5 EGDEILELNGESMAGLTHQDALQKFKQAKKGLLTLTVRTRLTAPP-SLCS---HLSPPLC ::::::..:: . ::: :.:.. ::: ..::..:::::.:..: . :: :.: CCDS34 EGDEILDVNGIPIKGLTFQEAIHTFKQIRSGLFVLTVRTKLVSPSLTPCSTPTHMSRSAS 640 650 660 670 680 690 320 330 340 350 360 370 pF1KE5 RSLSSSTCITKDSSSFALESPSAPISTAKPNYRIMVEVSLQKEAGVGLGIGLCSVPYFQC ....: . .:. . : : .: :. ::..::.:.:: :::::: : . . CCDS34 PNFNTSGGASAGGSDEG-SSSSLGRKTPGPKDRIVMEVTLNKEPRVGLGIGACCLALENS 700 710 720 730 740 750 380 390 400 410 420 430 pF1KE5 ISGIFVHTLSPGSVAHLDGRLRCGDEIVEISDSPVHCLTLNEVYTILSHCDPGPVSIIVS ::..:.:.:::::.... : ::.:.:... :. .:..:..:::.: :::: .... CCDS34 PPGIYIHSLAPGSVAKMESNLSRGDQILEVNSVNVRHAALSKVHAILSKCPPGPVRLVIG 760 770 780 790 800 810 440 450 pF1KE5 RHPDPQKEEMEAQEVK :::.:. :.: .:: CCDS34 RHPNPKVSEQEMDEVIARSTYQESKEANSSPGLGTPLKSPSLAKKDSLISESELSQYFAH 820 830 840 850 860 870 454 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 01:58:37 2016 done: Tue Nov 8 01:58:37 2016 Total Scan time: 2.820 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]