FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5544, 381 aa 1>>>pF1KE5544 381 - 381 aa - 381 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.6976+/-0.00111; mu= 9.2698+/- 0.066 mean_var=102.7236+/-20.347, 0's: 0 Z-trim(105.1): 75 B-trim: 0 in 0/49 Lambda= 0.126543 statistics sampled from 8184 (8231) to 8184 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.629), E-opt: 0.2 (0.253), width: 16 Scan time: 2.830 The best scores are: opt bits E(32554) CCDS5875.1 TRPV5 gene_id:56302|Hs108|chr7 ( 729) 2491 465.9 5e-131 CCDS5874.2 TRPV6 gene_id:55503|Hs108|chr7 ( 765) 1912 360.2 3.5e-99 CCDS32576.1 TRPV2 gene_id:51393|Hs108|chr17 ( 764) 324 70.3 6.5e-12 >>CCDS5875.1 TRPV5 gene_id:56302|Hs108|chr7 (729 aa) initn: 2491 init1: 2491 opt: 2491 Z-score: 2465.8 bits: 465.9 E(32554): 5e-131 Smith-Waterman score: 2491; 100.0% identity (100.0% similar) in 374 aa overlap (1-374:1-374) 10 20 30 40 50 60 pF1KE5 MGGFLPKAEGPGSQLQKLLPSFLVREQDWDQHLDKLHMLQQKRILESPLLRASKENDLSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 MGGFLPKAEGPGSQLQKLLPSFLVREQDWDQHLDKLHMLQQKRILESPLLRASKENDLSV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 LRQLLLDCTCDVRQRGALGETALHIAALYDNLEAALVLMEAAPELVFEPTTCEAFAGQTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 LRQLLLDCTCDVRQRGALGETALHIAALYDNLEAALVLMEAAPELVFEPTTCEAFAGQTA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 LHIAVVNQNVNLVRALLTRRASVSARATGTAFRHSPRNLIYFGEHPLSFAACVNSEEIVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 LHIAVVNQNVNLVRALLTRRASVSARATGTAFRHSPRNLIYFGEHPLSFAACVNSEEIVR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 LLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGHGDHLQPLDLVPNHQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 LLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGHGDHLQPLDLVPNHQG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 LTPFKLAGVEGNTVMFQHLMQKRRHIQWTYGPLTSILYDLTEIDSWGEELSFLELVVSSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 LTPFKLAGVEGNTVMFQHLMQKRRHIQWTYGPLTSILYDLTEIDSWGEELSFLELVVSSD 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 KREARQILEQTPVKELVSFKWNKYGRPYFCILAALYLLYMICFTTCCVYRPLKFRGGNRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 KREARQILEQTPVKELVSFKWNKYGRPYFCILAALYLLYMICFTTCCVYRPLKFRGGNRT 310 320 330 340 350 360 370 380 pF1KE5 HSRDITILQQKLLQVILLRRG :::::::::::::: CCDS58 HSRDITILQQKLLQEAYETREDIIRLVGELVSIVGAVIILLLEIPDIFRVGASRYFGKTI 370 380 390 400 410 420 >>CCDS5874.2 TRPV6 gene_id:55503|Hs108|chr7 (765 aa) initn: 1912 init1: 1912 opt: 1912 Z-score: 1894.2 bits: 360.2 E(32554): 3.5e-99 Smith-Waterman score: 1912; 77.8% identity (89.0% similar) in 374 aa overlap (1-374:41-414) 10 20 30 pF1KE5 MGGFLPKAEGPGSQLQKLLPSFLVREQDWD :: ::: .: : . . .. :...: CCDS58 ALGGADVAPRLSPVRVWPRPQAPKEPALHPMGLSLPKEKGLILCLWSKFCRWFQRRESWA 20 30 40 50 60 70 40 50 60 70 80 90 pF1KE5 QHLDKLHMLQQKRILESPLLRASKENDLSVLRQLLLDCTCDVRQRGALGETALHIAALYD : :. ..:::::: ::::: :.:.::...: .:: : :.::::.:::::::::::: CCDS58 QSRDEQNLLQQKRIWESPLLLAAKDNDVQALNKLLKYEDCKVHQRGAMGETALHIAALYD 80 90 100 110 120 130 100 110 120 130 140 150 pF1KE5 NLEAALVLMEAAPELVFEPTTCEAFAGQTALHIAVVNQNVNLVRALLTRRASVSARATGT :::::.::::::::::::: : : . :::::::::::::.:::::::.:::::::::::: CCDS58 NLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVVNQNMNLVRALLARRASVSARATGT 140 150 160 170 180 190 160 170 180 190 200 210 pF1KE5 AFRHSPRNLIYFGEHPLSFAACVNSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKT :::.:: ::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 AFRRSPCNLIYFGEHPLSFAACVNSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKT 200 210 220 230 240 250 220 230 240 250 260 270 pF1KE5 FACQMYNLLLSYDGHGDHLQPLDLVPNHQGLTPFKLAGVEGNTVMFQHLMQKRRHIQWTY ::::::::::::: :::::::::::::::::::::::::::::::::::::::.: :::: CCDS58 FACQMYNLLLSYDRHGDHLQPLDLVPNHQGLTPFKLAGVEGNTVMFQHLMQKRKHTQWTY 260 270 280 290 300 310 280 290 300 310 320 330 pF1KE5 GPLTSILYDLTEIDSWGEELSFLELVVSSDKREARQILEQTPVKELVSFKWNKYGRPYFC ::::: ::::::::: :.: :.:::.... ::::::::.:::::::::.::..::::::: CCDS58 GPLTSTLYDLTEIDSSGDEQSLLELIITTKKREARQILDQTPVKELVSLKWKRYGRPYFC 320 330 340 350 360 370 340 350 360 370 380 pF1KE5 ILAALYLLYMICFTTCCVYRPLKFRGGNRTHSRDITILQQKLLQVILLRRG .:.:.::::.:::: ::.::::: : .::: :: :.::::::: CCDS58 MLGAIYLLYIICFTMCCIYRPLKPRTNNRTSPRDNTLLQQKLLQEAYMTPKDDIRLVGEL 380 390 400 410 420 430 CCDS58 VTVIGAIIILLVEVPDIFRMGVTRFFGQTILGGPFHVLIITYAFMVLVTMVMRLISASGE 440 450 460 470 480 490 >>CCDS32576.1 TRPV2 gene_id:51393|Hs108|chr17 (764 aa) initn: 402 init1: 180 opt: 324 Z-score: 327.4 bits: 70.3 E(32554): 6.5e-12 Smith-Waterman score: 454; 34.5% identity (61.6% similar) in 307 aa overlap (76-351:113-413) 50 60 70 80 90 100 pF1KE5 ESPLLRASKENDLSVLRQLLLDCTCDVRQRGALGETALHIAALY--DNLEAALV-LME-- :. :.: : :.: :...: .. :.. CCDS32 VSRGVPEDLAGLPEYLSKTSKYLTDSEYTEGSTGKTCLMKAVLNLKDGVNACILPLLQID 90 100 110 120 130 140 110 120 130 140 150 pF1KE5 ---AAPE-LVFEPTTCEAFAGQTALHIAVVNQNVNLVRALLTRRASVSARATGTAFRHSP . :. :: : . . :..:::::. ..... :. :. :.: ::: : :... CCDS32 RDSGNPQPLVNAQCTDDYYRGHSALHIAIEKRSLQCVKLLVENGANVHARACGRFFQKGQ 150 160 170 180 190 200 160 170 180 190 200 210 pF1KE5 RNLIYFGEHPLSFAACVNSEEIVRLLIEHG---ADIRAQDSLGNTVLHILILQPNKTFAC . .:::: :::.:::... ..: :.:. :...: :: :::::: :.. ... CCDS32 GTCFYFGELPLSLAACTKQWDVVSYLLENPHQPASLQATDSQGNTVLHALVMISDNS--A 210 220 230 240 250 260 220 230 240 250 260 pF1KE5 QMYNLLLS-YDG---HGDHLQP---LDLVPNHQGLTPFKLAGVEGNTVMFQHLMQK---- . :. : ::: : .: : :. . : : :::.:::. ::. .:.:..:. CCDS32 ENIALVTSMYDGLLQAGARLCPTVQLEDIRNLQDLTPLKLAAKEGKIEIFRHILQREFSG 270 280 290 300 310 320 270 280 290 300 310 pF1KE5 -----RRHIQWTYGPLTSILYDLTEIDSWGEELSFLELVV---SSDKREARQILEQTPVK :. .: :::. ::::. .:: :: : ::... .: .:. .:: :.. CCDS32 LSHLSRKFTEWCYGPVRVSLYDLASVDS-CEENSVLEIIAFHCKSPHRHRMVVLE--PLN 330 340 350 360 370 320 330 340 350 360 370 pF1KE5 ELVSFKWNKYGRPYFCILAALYLLYMICFTTCCVYRPLKFRGGNRTHSRDITILQQKLLQ .:.. ::. : : . :.::. ::. ..: CCDS32 KLLQAKWDLLI-PKFFLNFLCNLIYMFIFTAVAYHQPTLKKQAAPHLKAEVGNSMLLTGH 380 390 400 410 420 430 380 pF1KE5 VILLRRG CCDS32 ILILLGGIYLLVGQLWYFWRRHVFIWISFIDSYFEILFLFQALLTVVSQVLCFLAIEWYL 440 450 460 470 480 490 381 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 01:40:42 2016 done: Tue Nov 8 01:40:42 2016 Total Scan time: 2.830 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]