FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE9685, 311 aa 1>>>pF1KE9685 311 - 311 aa - 311 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.4518+/-0.00078; mu= 11.1667+/- 0.047 mean_var=101.4772+/-20.090, 0's: 0 Z-trim(110.5): 51 B-trim: 3 in 1/53 Lambda= 0.127318 statistics sampled from 11600 (11651) to 11600 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.722), E-opt: 0.2 (0.358), width: 16 Scan time: 1.760 The best scores are: opt bits E(32554) CCDS56456.1 KATNA1 gene_id:11104|Hs108|chr6 ( 311) 2052 386.9 1e-107 CCDS5217.1 KATNA1 gene_id:11104|Hs108|chr6 ( 491) 1119 215.7 5.9e-56 CCDS31956.1 KATNAL1 gene_id:84056|Hs108|chr13 ( 490) 866 169.2 5.7e-42 CCDS32828.1 KATNAL2 gene_id:83473|Hs108|chr18 ( 466) 589 118.3 1.1e-26 CCDS11983.1 VPS4B gene_id:9525|Hs108|chr18 ( 444) 536 108.6 9.3e-24 CCDS45517.1 VPS4A gene_id:27183|Hs108|chr16 ( 437) 533 108.0 1.4e-23 CCDS5510.1 FIGNL1 gene_id:63979|Hs108|chr7 ( 674) 520 105.7 1e-22 CCDS1779.1 SPAST gene_id:6683|Hs108|chr2 ( 584) 489 100.0 4.6e-21 CCDS1778.1 SPAST gene_id:6683|Hs108|chr2 ( 616) 489 100.0 4.9e-21 CCDS7386.1 ATAD1 gene_id:84896|Hs108|chr10 ( 361) 379 79.7 3.8e-15 CCDS9710.2 PSMC6 gene_id:5706|Hs108|chr14 ( 403) 371 78.2 1.1e-14 CCDS58062.1 NVL gene_id:4931|Hs108|chr1 ( 667) 363 76.9 4.8e-14 CCDS1542.1 NVL gene_id:4931|Hs108|chr1 ( 750) 363 76.9 5.3e-14 CCDS58063.1 NVL gene_id:4931|Hs108|chr1 ( 765) 363 76.9 5.4e-14 CCDS1541.1 NVL gene_id:4931|Hs108|chr1 ( 856) 363 77.0 5.9e-14 CCDS3730.1 SPATA5 gene_id:166378|Hs108|chr4 ( 893) 359 76.2 1e-13 CCDS58072.1 YME1L1 gene_id:10730|Hs108|chr10 ( 683) 356 75.6 1.2e-13 CCDS7151.1 YME1L1 gene_id:10730|Hs108|chr10 ( 716) 356 75.6 1.2e-13 CCDS7152.1 YME1L1 gene_id:10730|Hs108|chr10 ( 773) 356 75.6 1.3e-13 CCDS2221.2 FIGN gene_id:55137|Hs108|chr2 ( 759) 355 75.5 1.5e-13 CCDS81837.1 PSMC1 gene_id:5700|Hs108|chr14 ( 367) 349 74.2 1.7e-13 CCDS6573.1 VCP gene_id:7415|Hs108|chr9 ( 806) 354 75.3 1.8e-13 CCDS32139.1 PSMC1 gene_id:5700|Hs108|chr14 ( 440) 349 74.2 2e-13 CCDS56043.1 PSMC5 gene_id:5705|Hs108|chr17 ( 398) 347 73.8 2.4e-13 CCDS11645.1 PSMC5 gene_id:5705|Hs108|chr17 ( 406) 347 73.8 2.4e-13 CCDS7935.1 PSMC3 gene_id:5702|Hs108|chr11 ( 439) 344 73.3 3.8e-13 CCDS46076.1 PSMC4 gene_id:5704|Hs108|chr19 ( 387) 339 72.3 6.5e-13 CCDS12547.1 PSMC4 gene_id:5704|Hs108|chr19 ( 418) 339 72.4 6.9e-13 CCDS5731.1 PSMC2 gene_id:5701|Hs108|chr7 ( 433) 337 72.0 9.2e-13 CCDS4877.1 PEX6 gene_id:5190|Hs108|chr6 ( 980) 338 72.4 1.6e-12 CCDS64710.1 PEX1 gene_id:5189|Hs108|chr7 (1226) 338 72.5 1.9e-12 CCDS5627.1 PEX1 gene_id:5189|Hs108|chr7 (1283) 338 72.5 2e-12 CCDS11859.1 AFG3L2 gene_id:10939|Hs108|chr18 ( 797) 309 67.0 5.4e-11 CCDS46227.1 ATAD2B gene_id:54454|Hs108|chr2 (1458) 310 67.4 7.8e-11 CCDS10977.1 SPG7 gene_id:6687|Hs108|chr16 ( 795) 306 66.5 7.9e-11 >>CCDS56456.1 KATNA1 gene_id:11104|Hs108|chr6 (311 aa) initn: 2052 init1: 2052 opt: 2052 Z-score: 2047.2 bits: 386.9 E(32554): 1e-107 Smith-Waterman score: 2052; 100.0% identity (100.0% similar) in 311 aa overlap (1-311:1-311) 10 20 30 40 50 60 pF1KE9 MSLLMISENVKLAREYALLGNYDSAMVYYQGVLDQMNKYLYSVKDTYLQQKWQQVWQEIN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 MSLLMISENVKLAREYALLGNYDSAMVYYQGVLDQMNKYLYSVKDTYLQQKWQQVWQEIN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE9 VEAKHVKDIMKTLESFKLDSTPLKAAQHDLPASEGEVWSMPVPVERRPSPGPRKRQSSQY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 VEAKHVKDIMKTLESFKLDSTPLKAAQHDLPASEGEVWSMPVPVERRPSPGPRKRQSSQY 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE9 SDPKSHGNRPSTTVRVHRSSAQNVHNDRGKAVRCREKKEQNKGREEKGVLMVGPPGTGKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 SDPKSHGNRPSTTVRVHRSSAQNVHNDRGKAVRCREKKEQNKGREEKGVLMVGPPGTGKT 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE9 LLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 LLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE9 RGTSEEHEASRRVKAELLVQMDGVGGTSENDDPSKMVMVLAATNFPWDIDEALRRRLEKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 RGTSEEHEASRRVKAELLVQMDGVGGTSENDDPSKMVMVLAATNFPWDIDEALRRRLEKR 250 260 270 280 290 300 310 pF1KE9 IYIPLPSGMRP ::::::::::: CCDS56 IYIPLPSGMRP 310 >>CCDS5217.1 KATNA1 gene_id:11104|Hs108|chr6 (491 aa) initn: 1119 init1: 1119 opt: 1119 Z-score: 1118.1 bits: 215.7 E(32554): 5.9e-56 Smith-Waterman score: 1589; 77.8% identity (77.8% similar) in 343 aa overlap (1-267:1-343) 10 20 30 40 50 60 pF1KE9 MSLLMISENVKLAREYALLGNYDSAMVYYQGVLDQMNKYLYSVKDTYLQQKWQQVWQEIN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS52 MSLLMISENVKLAREYALLGNYDSAMVYYQGVLDQMNKYLYSVKDTYLQQKWQQVWQEIN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE9 VEAKHVKDIMKTLESFKLDSTPLKAAQHDLPASEGEVWSMPVPVERRPSPGPRKRQSSQY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS52 VEAKHVKDIMKTLESFKLDSTPLKAAQHDLPASEGEVWSMPVPVERRPSPGPRKRQSSQY 70 80 90 100 110 120 130 140 150 160 pF1KE9 SDPKSHGNRPSTTVRVHRSSAQNVHNDRGKAVRCREKKEQNKGREEK------------- ::::::::::::::::::::::::::::::::::::::::::::::: CCDS52 SDPKSHGNRPSTTVRVHRSSAQNVHNDRGKAVRCREKKEQNKGREEKNKSPAAVTEPETN 130 140 150 160 170 180 pF1KE9 ------------------------------------------------------------ CCDS52 KFDSTGYDKDLVEALERDIISQNPNVRWDDIADLVEAKKLLKEAVVLPMWMPEFFKGIRR 190 200 210 220 230 240 170 180 190 200 210 220 pF1KE9 ---GVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFY ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS52 PWKGVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFY 250 260 270 280 290 300 230 240 250 260 270 280 pF1KE9 SPATIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGTSENDDPSKMVMVLAATN ::::::::::::::::::::::::::::::::::::::::::: CCDS52 SPATIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGTSENDDPSKMVMVLAATN 310 320 330 340 350 360 290 300 310 pF1KE9 FPWDIDEALRRRLEKRIYIPLPSGMRP CCDS52 FPWDIDEALRRRLEKRIYIPLPSAKGREELLRISLRELELADDVDLASIAENMEGYSGAD 370 380 390 400 410 420 >>CCDS31956.1 KATNAL1 gene_id:84056|Hs108|chr13 (490 aa) initn: 1233 init1: 863 opt: 866 Z-score: 866.9 bits: 169.2 E(32554): 5.7e-42 Smith-Waterman score: 934; 52.5% identity (65.8% similar) in 339 aa overlap (44-307:44-382) 20 30 40 50 60 70 pF1KE9 REYALLGNYDSAMVYYQGVLDQMNKYLYSVKDTYLQQKWQQVWQEINVEAKHVKDIMKTL .: .. ::::: ::. : ..::.:..:: CCDS31 REYALLGNYDSSMVYYQGVMQQIQRHCQSVRDPAIKGKWQQVRQELLEEYEQVKSIVSTL 20 30 40 50 60 70 80 90 100 110 pF1KE9 ESFKLDSTP-LKAAQHDLPASEGEVWSMPVPVERRPSPGPRK-----------------R ::::.:. : . .. .: : . :: :::.:.: : :. : CCDS31 ESFKIDKPPDFPVSCQDEPFRDPAVWPPPVPAEHRAPPQIRRPNREVRPLRKEMAGVGAR 80 90 100 110 120 130 120 130 140 pF1KE9 QSSQYSDPKSHGNRPSTT----VRVH------RSSAQNVHND------------------ . : :....:::. :.. :.. :. .: CCDS31 GPVGRAHPISKSEKPSTSRDKDYRARGRDDKGRKNMQDGASDGEMPKFDGAGYDKDLVEA 140 150 160 170 180 190 150 160 170 pF1KE9 -------RGKAVR------CREKKEQN--------------KG--REEKGVLMVGPPGTG :. ... .: :. :: : :::::::::::: CCDS31 LERDIVSRNPSIHWDDIADLEEAKKLLREAVVLPMWMPDFFKGIRRPWKGVLMVGPPGTG 200 210 220 230 240 250 180 190 200 210 220 230 pF1KE9 KTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSIC ::.::::::::: :::::::::::::::::::::::::::::::::.:.::::::::::: CCDS31 KTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSIC 260 270 280 290 300 310 240 250 260 270 280 290 pF1KE9 SRRGTSEEHEASRRVKAELLVQMDGVGGTSENDDPSKMVMVLAATNFPWDIDEALRRRLE ::::::.:::::::::.:::.:::::::. :::::::::::::::::::::::::::::: CCDS31 SRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRRRLE 320 330 340 350 360 370 300 310 pF1KE9 KRIYIPLPSGMRP ::::::::. CCDS31 KRIYIPLPTAKGRAELLKINLREVELDPDIQLEDIAEKIEGYSGADITNVCRDASLMAMR 380 390 400 410 420 430 >>CCDS32828.1 KATNAL2 gene_id:83473|Hs108|chr18 (466 aa) initn: 596 init1: 392 opt: 589 Z-score: 592.3 bits: 118.3 E(32554): 1.1e-26 Smith-Waterman score: 589; 63.6% identity (88.8% similar) in 143 aa overlap (167-307:216-352) 140 150 160 170 180 190 pF1KE9 HRSSAQNVHNDRGKAVRCREKKEQNKGREEKGVLMVGPPGTGKTLLAKAVATECKTTFFN ::.:. :::::::::::::::::::::::: CCDS32 GLDAAKQLVKEAVVYPIRYPQLFTGILSPWKGLLLYGPPGTGKTLLAKAVATECKTTFFN 190 200 210 220 230 240 200 210 220 230 240 250 pF1KE9 VSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTSE--EHEASRRVK .:.::..::.::.::::::.:::.::...:.:::.::..:. :.:::. :::.: :.: CCDS32 ISASTIVSKWRGDSEKLVRVLFELARYHAPSTIFLDELESVMSQRGTASGGEHEGSLRMK 250 260 270 280 290 300 260 270 280 290 300 310 pF1KE9 AELLVQMDGVGGTSENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSGMRP .::::::::. ....: .:.::::.:.::..: :. ::::::: . ::: CCDS32 TELLVQMDGL---ARSED---LVFVLAASNLPWELDCAMLRRLEKRILVDLPSREARQAM 310 320 330 340 350 CCDS32 IYHWLPPVSKSRALELHTELEYSVLSQETEGYSGSDIKLVCREAAMRPVRKIFDALENHQ 360 370 380 390 400 410 >>CCDS11983.1 VPS4B gene_id:9525|Hs108|chr18 (444 aa) initn: 386 init1: 216 opt: 536 Z-score: 540.0 bits: 108.6 E(32554): 9.3e-24 Smith-Waterman score: 550; 38.9% identity (66.1% similar) in 301 aa overlap (20-306:25-301) 10 20 30 40 50 pF1KE9 MSLLMISENVKLAREYALLGNYDSAMVYYQGVLDQMNKYLYSVKDTYLQQKWQQV :::. :. :: ... .:. :: . . ... CCDS11 MSSTSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQY---FLHVVK---YEAQGDKA 10 20 30 40 50 60 70 80 90 100 110 pF1KE9 WQEINVEAKHVKDIMKTLESFKLDSTPLKAAQHDLPASEGEVWSMPVPVERRPSPGPRKR : : .. . : . :. . .. : ::. :..::. : :.... . . . CCDS11 KQSIRAKCTEYLDRAEKLKEYLKNKE--KKAQK--PVKEGQ----PSPADEKGNDSDGEG 60 70 80 90 100 120 130 140 150 160 pF1KE9 QSSQYSDP--KSHGNRPSTTVRVHRSSAQ--NVHNDRGKAVRCREK-----KEQN--KGR .:. :: :. :. . .. ..: ... .: . .: .: : . :. CCDS11 ESD---DPEKKKLQNQLQGAIVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGK 110 120 130 140 150 160 170 180 190 200 210 220 pF1KE9 EE--KGVLMVGPPGTGKTLLAKAVATECK-TTFFNVSSSTLTSKYRGESEKLVRLLFEMA . .:.:. :::::::. :::::::: . .:::..::: :.::. :::::::. ::..: CCDS11 RTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLA 170 180 190 200 210 220 230 240 250 260 270 280 pF1KE9 RFYSPATIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGTSENDDPSKMVMVLA : .:. ::::::::.:. : . .: ::.::.:.:.::::.::: .:: ..::. CCDS11 RENKPSIIFIDEIDSLCGSR-SENESEAARRIKTEFLVQMQGVG--VDNDG----ILVLG 230 240 250 260 270 290 300 310 pF1KE9 ATNFPWDIDEALRRRLEKRIYIPLPSGMRP :::.:: .: :.:::.::::::::: CCDS11 ATNIPWVLDSAIRRRFEKRIYIPLPEPHARAAMFKLHLGTTQNSLTEADFRELGRKTDGY 280 290 300 310 320 330 >>CCDS45517.1 VPS4A gene_id:27183|Hs108|chr16 (437 aa) initn: 539 init1: 222 opt: 533 Z-score: 537.1 bits: 108.0 E(32554): 1.4e-23 Smith-Waterman score: 534; 37.6% identity (65.1% similar) in 295 aa overlap (21-306:24-294) 10 20 30 40 50 pF1KE9 MSLLMISENVKLAREYALLGNYDSAMVYYQGVLDQMNKYLYSVKDTYLQQKWQQVWQ ::. :. :: ... .:...: ..: .. . CCDS45 MTTSTLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEY---FLHAIKYEAHSDKAKESIR 10 20 30 40 50 60 70 80 90 100 110 pF1KE9 EINVE----AKHVKDIMKTLESFKLDSTPLKAAQHDLPASEGEVWSMPVPVERRPSPGPR :. :...:: ... : : . :.: : . .:... . .:. CCDS45 AKCVQYLDRAEKLKDYLRSKE--KHGKKPVKENQSEGKGSDSD----------SEGDNPE 60 70 80 90 100 120 130 140 150 160 pF1KE9 KRQSSQYSDPKSHGNRPSTTVRVHRSSAQNVHNDRGKAVRCREKKEQN--KGREE--KGV :.. .. ..:. .: . .. . .. : . : . :.. .:. CCDS45 KKKLQEQLMGAVVMEKPN--IRWNDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGI 110 120 130 140 150 160 170 180 190 200 210 220 pF1KE9 LMVGPPGTGKTLLAKAVATECK-TTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPAT :. :::::::. :::::::: . .:::.:::: : ::. :::::::. :::.:: ..:. CCDS45 LLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSI 170 180 190 200 210 220 230 240 250 260 270 280 pF1KE9 IFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGTSENDDPSKMVMVLAATNFPWD :::::.::.:. :. .: ::.::.:.:.::::.:::. :.: . .::.:::.:: CCDS45 IFIDEVDSLCGSRNENES-EAARRIKTEFLVQMQGVGN---NNDGT---LVLGATNIPWV 230 240 250 260 270 290 300 310 pF1KE9 IDEALRRRLEKRIYIPLPSGMRP .: :.:::.::::::::: CCDS45 LDSAIRRRFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANIHELARKTEGYSGADISI 280 290 300 310 320 330 >>CCDS5510.1 FIGNL1 gene_id:63979|Hs108|chr7 (674 aa) initn: 538 init1: 324 opt: 520 Z-score: 521.4 bits: 105.7 E(32554): 1e-22 Smith-Waterman score: 520; 57.9% identity (82.9% similar) in 140 aa overlap (167-306:435-568) 140 150 160 170 180 190 pF1KE9 HRSSAQNVHNDRGKAVRCREKKEQNKGREEKGVLMVGPPGTGKTLLAKAVATECKTTFFN ::.:. :::::::::..: .:.. .:::. CCDS55 GVEFAKATIKEIVVWPMLRPDIFTGLRGPPKGILLFGPPGTGKTLIGKCIASQSGATFFS 410 420 430 440 450 460 200 210 220 230 240 250 pF1KE9 VSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTSEEHEASRRVKAE .:.:.::::. ::.::.:: :: .:: .::.::::::::. :.:: .: ::.:::.:.: CCDS55 ISASSLTSKWVGEGEKMVRALFAVARCQQPAVIFIDEIDSLLSQRGDGE-HESSRRIKTE 470 480 490 500 510 520 260 270 280 290 300 310 pF1KE9 LLVQMDGVGGTSENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSGMRP .:::.::. .::. ..:..::: : .:::: :::: ::.::::: CCDS55 FLVQLDGATTSSEDR-----ILVVGATNRPQEIDEAARRRLVKRLYIPLPEASARKQIVI 530 540 550 560 570 CCDS55 NLMSKEQCCLSEEEIEQIVQQSDAFSGADMTQLCREASLGPIRSLQTADIATITPDQVRP 580 590 600 610 620 630 >>CCDS1779.1 SPAST gene_id:6683|Hs108|chr2 (584 aa) initn: 479 init1: 295 opt: 489 Z-score: 491.6 bits: 100.0 E(32554): 4.6e-21 Smith-Waterman score: 489; 55.6% identity (81.0% similar) in 142 aa overlap (167-307:344-478) 140 150 160 170 180 190 pF1KE9 HRSSAQNVHNDRGKAVRCREKKEQNKGREEKGVLMVGPPGTGKTLLAKAVATECKTTFFN .:.:. ::::.:::.::::::.: ..:::: CCDS17 GQDLAKQALQEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFN 320 330 340 350 360 370 200 210 220 230 240 250 pF1KE9 VSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSI-CSRRGTSEEHEASRRVKA .:...::::: ::.::::: :: .:: .:. :::::.::. : :: ::.::::.:. CCDS17 ISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERR--EGEHDASRRLKT 380 390 400 410 420 430 260 270 280 290 300 310 pF1KE9 ELLVQMDGVGGTSENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSGMRP :.:...::: : .:: :.:..::: : ..:::. ::. ::.:. ::. CCDS17 EFLIEFDGV--QSAGDD---RVLVMGATNRPQELDEAVLRRFIKRVYVSLPNEETRLLLL 440 450 460 470 480 CCDS17 KNLLCKQGSPLTQKELAQLARMTDGYSGSDLTALAKDAALGPIRELKPEQVKNMSASEMR 490 500 510 520 530 540 >>CCDS1778.1 SPAST gene_id:6683|Hs108|chr2 (616 aa) initn: 479 init1: 295 opt: 489 Z-score: 491.2 bits: 100.0 E(32554): 4.9e-21 Smith-Waterman score: 495; 32.6% identity (61.4% similar) in 337 aa overlap (9-307:184-510) 10 20 30 pF1KE9 MSLLMISENVKLAREY-ALLGNYDSAMVYYQGVLDQMN :. .:.. :: ... .. . .. : .: CCDS17 EELEKGIAVIVTGQGEQCERARRLQAKMMTNLVMAKDRLQLLEKMQPVLPFSKSQTDVYN 160 170 180 190 200 210 40 50 60 70 80 90 pF1KE9 KYL-YSVKDTYLQQKWQQVWQEINVEAKHVKDIMKTLESFKLDSTPLKAAQHDLPASEGE . .. .::.. : .. . .. ... .. .: :. : ...: :. : CCDS17 DSTNLACRNGHLQSESGAVPKRKDPLTHTSNSLPRSKTVMKTGSAGL-SGHHRAPSYSG- 220 230 240 250 260 270 100 110 120 130 140 pF1KE9 VWSMPVPVERRPSPGPRKRQSSQYSDPKSHGNRPSTTVRVH------RSSAQNVHN---- :: :.. .:.: .... .. .. . :.:..: . :. .:. : CCDS17 -LSMVSGVKQGSGPAPTTHKGTPKTNRTNKPSTPTTATRKKKDLKNFRNVDSNLANLIMN 280 290 300 310 320 330 150 160 170 180 pF1KE9 ---DRGKAVRCREKKEQNKGREE----------------------KGVLMVGPPGTGKTL : : ::. . :. ... .:.:. ::::.:::. CCDS17 EIVDNGTAVKFDDIAGQDLAKQALQEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTM 340 350 360 370 380 390 190 200 210 220 230 240 pF1KE9 LAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSI-CSR ::::::.: ..::::.:...::::: ::.::::: :: .:: .:. :::::.::. : : CCDS17 LAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCER 400 410 420 430 440 450 250 260 270 280 290 300 pF1KE9 RGTSEEHEASRRVKAELLVQMDGVGGTSENDDPSKMVMVLAATNFPWDIDEALRRRLEKR : ::.::::.:.:.:...::: : .:: :.:..::: : ..:::. ::. :: CCDS17 R--EGEHDASRRLKTEFLIEFDGV--QSAGDD---RVLVMGATNRPQELDEAVLRRFIKR 460 470 480 490 500 310 pF1KE9 IYIPLPSGMRP .:. ::. CCDS17 VYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARMTDGYSGSDLTALAKDAALGPIRE 510 520 530 540 550 560 >>CCDS7386.1 ATAD1 gene_id:84896|Hs108|chr10 (361 aa) initn: 359 init1: 257 opt: 379 Z-score: 385.4 bits: 79.7 E(32554): 3.8e-15 Smith-Waterman score: 379; 46.1% identity (70.9% similar) in 141 aa overlap (167-307:127-261) 140 150 160 170 180 190 pF1KE9 HRSSAQNVHNDRGKAVRCREKKEQNKGREEKGVLMVGPPGTGKTLLAKAVATECKTTFFN ::::. :::: ::::.:::.: : :.: CCDS73 DDVITDLKDTVILPIKKKHLFENSRLLQPPKGVLLYGPPGCGKTLIAKATAKEAGCRFIN 100 110 120 130 140 150 200 210 220 230 240 250 pF1KE9 VSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTSEEHEASRRVKAE .. ::::.:. :::.::. .: .: .:. ::::::::. :..:. :::. .::. CCDS73 LQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNRSSSD-HEATAMMKAQ 160 170 180 190 200 210 260 270 280 290 300 310 pF1KE9 LLVQMDGVGGTSENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSGMRP .. ::. . : : .:.:..::: : :.: :. ::. :..: :. CCDS73 FMSLWDGL-----DTDHSCQVIVMGATNRPQDLDSAIMRRMPTRFHINQPALKQREAILK 220 230 240 250 260 270 CCDS73 LILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDAALLCVREYVNSTSEESHDEDEIRP 280 290 300 310 320 330 311 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 10:33:24 2016 done: Tue Nov 8 10:33:25 2016 Total Scan time: 1.760 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]