FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1648, 164 aa 1>>>pF1KE1648 164 - 164 aa - 164 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.9895+/-0.00029; mu= 15.8943+/- 0.018 mean_var=110.6753+/-21.475, 0's: 0 Z-trim(122.1): 38 B-trim: 922 in 2/50 Lambda= 0.121913 statistics sampled from 39722 (39770) to 39722 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.812), E-opt: 0.2 (0.466), width: 16 Scan time: 5.830 The best scores are: opt bits E(85289) NP_000481 (OMIM: 125700,192340) vasopressin-neurop ( 164) 1210 222.2 3e-58 XP_011527569 (OMIM: 125700,192340) PREDICTED: vaso ( 164) 1210 222.2 3e-58 NP_000906 (OMIM: 167050) oxytocin-neurophysin 1 pr ( 125) 698 132.0 3.2e-31 XP_011527540 (OMIM: 167050) PREDICTED: oxytocin-ne ( 125) 698 132.0 3.2e-31 >>NP_000481 (OMIM: 125700,192340) vasopressin-neurophysi (164 aa) initn: 1210 init1: 1210 opt: 1210 Z-score: 1166.8 bits: 222.2 E(85289): 3e-58 Smith-Waterman score: 1210; 100.0% identity (100.0% similar) in 164 aa overlap (1-164:1-164) 10 20 30 40 50 60 pF1KE1 MPDTMLPACFLGLLAFSSACYFQNCPRGGKRAMSDLELRQCLPCGPGGKGRCFGPSICCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 MPDTMLPACFLGLLAFSSACYFQNCPRGGKRAMSDLELRQCLPCGPGGKGRCFGPSICCA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 DELGCFVGTAEALRCQEENYLPSPCQSGQKACGSGGRCAAFGVCCNDESCVTEPECREGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 DELGCFVGTAEALRCQEENYLPSPCQSGQKACGSGGRCAAFGVCCNDESCVTEPECREGF 70 80 90 100 110 120 130 140 150 160 pF1KE1 HRRARASDRSNATQLDGPAGALLLRLVQLAGAPEPFEPAQPDAY :::::::::::::::::::::::::::::::::::::::::::: NP_000 HRRARASDRSNATQLDGPAGALLLRLVQLAGAPEPFEPAQPDAY 130 140 150 160 >>XP_011527569 (OMIM: 125700,192340) PREDICTED: vasopres (164 aa) initn: 1210 init1: 1210 opt: 1210 Z-score: 1166.8 bits: 222.2 E(85289): 3e-58 Smith-Waterman score: 1210; 100.0% identity (100.0% similar) in 164 aa overlap (1-164:1-164) 10 20 30 40 50 60 pF1KE1 MPDTMLPACFLGLLAFSSACYFQNCPRGGKRAMSDLELRQCLPCGPGGKGRCFGPSICCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MPDTMLPACFLGLLAFSSACYFQNCPRGGKRAMSDLELRQCLPCGPGGKGRCFGPSICCA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 DELGCFVGTAEALRCQEENYLPSPCQSGQKACGSGGRCAAFGVCCNDESCVTEPECREGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 DELGCFVGTAEALRCQEENYLPSPCQSGQKACGSGGRCAAFGVCCNDESCVTEPECREGF 70 80 90 100 110 120 130 140 150 160 pF1KE1 HRRARASDRSNATQLDGPAGALLLRLVQLAGAPEPFEPAQPDAY :::::::::::::::::::::::::::::::::::::::::::: XP_011 HRRARASDRSNATQLDGPAGALLLRLVQLAGAPEPFEPAQPDAY 130 140 150 160 >>NP_000906 (OMIM: 167050) oxytocin-neurophysin 1 prepro (125 aa) initn: 770 init1: 679 opt: 698 Z-score: 681.4 bits: 132.0 E(85289): 3.2e-31 Smith-Waterman score: 698; 75.0% identity (89.7% similar) in 116 aa overlap (1-116:1-116) 10 20 30 40 50 60 pF1KE1 MPDTMLPACFLGLLAFSSACYFQNCPRGGKRAMSDLELRQCLPCGPGGKGRCFGPSICCA : : :.:::::..::::.:::: ::::: ::..:.:::::::::::::::.:::: NP_000 MAGPSLACCLLGLLALTSACYIQNCPLGGKRAAPDLDVRKCLPCGPGGKGRCFGPNICCA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 DELGCFVGTAEALRCQEENYLPSPCQSGQKACGSGGRCAAFGVCCNDESCVTEPECREGF .::::::::::::::::::::::::::::::::::::::..:.::. ..: ..: : NP_000 EELGCFVGTAEALRCQEENYLPSPCQSGQKACGSGGRCAVLGLCCSPDGCHADPACDAEA 70 80 90 100 110 120 130 140 150 160 pF1KE1 HRRARASDRSNATQLDGPAGALLLRLVQLAGAPEPFEPAQPDAY NP_000 TFSQR >>XP_011527540 (OMIM: 167050) PREDICTED: oxytocin-neurop (125 aa) initn: 770 init1: 679 opt: 698 Z-score: 681.4 bits: 132.0 E(85289): 3.2e-31 Smith-Waterman score: 698; 75.0% identity (89.7% similar) in 116 aa overlap (1-116:1-116) 10 20 30 40 50 60 pF1KE1 MPDTMLPACFLGLLAFSSACYFQNCPRGGKRAMSDLELRQCLPCGPGGKGRCFGPSICCA : : :.:::::..::::.:::: ::::: ::..:.:::::::::::::::.:::: XP_011 MAGPSLACCLLGLLALTSACYIQNCPLGGKRAAPDLDVRKCLPCGPGGKGRCFGPNICCA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 DELGCFVGTAEALRCQEENYLPSPCQSGQKACGSGGRCAAFGVCCNDESCVTEPECREGF .::::::::::::::::::::::::::::::::::::::..:.::. ..: ..: : XP_011 EELGCFVGTAEALRCQEENYLPSPCQSGQKACGSGGRCAVLGLCCSPDGCHADPACDAEA 70 80 90 100 110 120 130 140 150 160 pF1KE1 HRRARASDRSNATQLDGPAGALLLRLVQLAGAPEPFEPAQPDAY XP_011 TFSQR 164 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 22:10:09 2016 done: Mon Nov 7 22:10:09 2016 Total Scan time: 5.830 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]