FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1648, 164 aa 1>>>pF1KE1648 164 - 164 aa - 164 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.6697+/-0.000654; mu= 17.9265+/- 0.040 mean_var=112.6617+/-21.041, 0's: 0 Z-trim(115.7): 28 B-trim: 22 in 1/50 Lambda= 0.120833 statistics sampled from 16225 (16247) to 16225 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.833), E-opt: 0.2 (0.499), width: 16 Scan time: 2.100 The best scores are: opt bits E(32554) CCDS13045.1 AVP gene_id:551|Hs108|chr20 ( 164) 1210 220.2 4.5e-58 CCDS13044.1 OXT gene_id:5020|Hs108|chr20 ( 125) 698 130.8 2.9e-31 >>CCDS13045.1 AVP gene_id:551|Hs108|chr20 (164 aa) initn: 1210 init1: 1210 opt: 1210 Z-score: 1156.1 bits: 220.2 E(32554): 4.5e-58 Smith-Waterman score: 1210; 100.0% identity (100.0% similar) in 164 aa overlap (1-164:1-164) 10 20 30 40 50 60 pF1KE1 MPDTMLPACFLGLLAFSSACYFQNCPRGGKRAMSDLELRQCLPCGPGGKGRCFGPSICCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 MPDTMLPACFLGLLAFSSACYFQNCPRGGKRAMSDLELRQCLPCGPGGKGRCFGPSICCA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 DELGCFVGTAEALRCQEENYLPSPCQSGQKACGSGGRCAAFGVCCNDESCVTEPECREGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 DELGCFVGTAEALRCQEENYLPSPCQSGQKACGSGGRCAAFGVCCNDESCVTEPECREGF 70 80 90 100 110 120 130 140 150 160 pF1KE1 HRRARASDRSNATQLDGPAGALLLRLVQLAGAPEPFEPAQPDAY :::::::::::::::::::::::::::::::::::::::::::: CCDS13 HRRARASDRSNATQLDGPAGALLLRLVQLAGAPEPFEPAQPDAY 130 140 150 160 >>CCDS13044.1 OXT gene_id:5020|Hs108|chr20 (125 aa) initn: 770 init1: 679 opt: 698 Z-score: 674.9 bits: 130.8 E(32554): 2.9e-31 Smith-Waterman score: 698; 75.0% identity (89.7% similar) in 116 aa overlap (1-116:1-116) 10 20 30 40 50 60 pF1KE1 MPDTMLPACFLGLLAFSSACYFQNCPRGGKRAMSDLELRQCLPCGPGGKGRCFGPSICCA : : :.:::::..::::.:::: ::::: ::..:.:::::::::::::::.:::: CCDS13 MAGPSLACCLLGLLALTSACYIQNCPLGGKRAAPDLDVRKCLPCGPGGKGRCFGPNICCA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 DELGCFVGTAEALRCQEENYLPSPCQSGQKACGSGGRCAAFGVCCNDESCVTEPECREGF .::::::::::::::::::::::::::::::::::::::..:.::. ..: ..: : CCDS13 EELGCFVGTAEALRCQEENYLPSPCQSGQKACGSGGRCAVLGLCCSPDGCHADPACDAEA 70 80 90 100 110 120 130 140 150 160 pF1KE1 HRRARASDRSNATQLDGPAGALLLRLVQLAGAPEPFEPAQPDAY CCDS13 TFSQR 164 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 22:10:08 2016 done: Mon Nov 7 22:10:08 2016 Total Scan time: 2.100 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]