FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6391, 414 aa 1>>>pF1KE6391 414 - 414 aa - 414 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.6333+/-0.0012; mu= 6.3629+/- 0.071 mean_var=136.6579+/-26.494, 0's: 0 Z-trim(105.8): 31 B-trim: 11 in 1/51 Lambda= 0.109713 statistics sampled from 8595 (8598) to 8595 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.627), E-opt: 0.2 (0.264), width: 16 Scan time: 2.470 The best scores are: opt bits E(32554) CCDS9537.1 TMCO3 gene_id:55002|Hs108|chr13 ( 677) 2662 433.3 3.3e-121 >>CCDS9537.1 TMCO3 gene_id:55002|Hs108|chr13 (677 aa) initn: 2662 init1: 2662 opt: 2662 Z-score: 2289.5 bits: 433.3 E(32554): 3.3e-121 Smith-Waterman score: 2662; 99.8% identity (100.0% similar) in 410 aa overlap (1-410:1-410) 10 20 30 40 50 60 pF1KE6 MKVLGRSFFWVLFPVLPWAVQAVEHEEVAQRVIKLHRGRGVAAMQSRQWVRDSCRKLSGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 MKVLGRSFFWVLFPVLPWAVQAVEHEEVAQRVIKLHRGRGVAAMQSRQWVRDSCRKLSGL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 LRQKNAVLNKLKTAIGAVEKDVGLSDEEKLFQVHTFEIFQKELNESENSVFQAVYGLQRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 LRQKNAVLNKLKTAIGAVEKDVGLSDEEKLFQVHTFEIFQKELNESENSVFQAVYGLQRA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 LQGDYKDVVNMKESSRQRLEALREAAIKEETEYMELLAAEKHQVEALKNMQHQNQSLSML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 LQGDYKDVVNMKESSRQRLEALREAAIKEETEYMELLAAEKHQVEALKNMQHQNQSLSML 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 DEILEDVRKAADRLEEEIEEHAFDDNKSVKGVNFEAVLRVEEEEANSKQNITKREVEDDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 DEILEDVRKAADRLEEEIEEHAFDDNKSVKGVNFEAVLRVEEEEANSKQNITKREVEDDL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 GLSMLIDSQNNQYILTKPRDSTIPRADHHFIKDIVTIGMLSLPCGWLCTAIGLPTMFGYI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 GLSMLIDSQNNQYILTKPRDSTIPRADHHFIKDIVTIGMLSLPCGWLCTAIGLPTMFGYI 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 ICGVLLGPSGLNSIKSIVQVETLGEFGVFFTLFLVGLEFSPEKLRKVWKISLQGPCYMTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 ICGVLLGPSGLNSIKSIVQVETLGEFGVFFTLFLVGLEFSPEKLRKVWKISLQGPCYMTL 310 320 330 340 350 360 370 380 390 400 410 pF1KE6 LMIAFGLLWGHLLRIKPTQSVFISTCLSLSSTPLVSRFLMGSARGDKEGNRTAL :::::::::::::::::::::::::::::::::::::::::::::::::. CCDS95 LMIAFGLLWGHLLRIKPTQSVFISTCLSLSSTPLVSRFLMGSARGDKEGDIDYSTVLLGM 370 380 390 400 410 420 CCDS95 LVTQDVQLGLFMAVMPTLIQAGASASSSIVVEVLRILVLIGQILFSLAAVFLLCLVIKKY 430 440 450 460 470 480 414 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 12:51:15 2016 done: Tue Nov 8 12:51:16 2016 Total Scan time: 2.470 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]