FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5644, 477 aa 1>>>pF1KE5644 477 - 477 aa - 477 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.8001+/-0.000849; mu= 12.1654+/- 0.051 mean_var=120.5636+/-23.214, 0's: 0 Z-trim(110.8): 24 B-trim: 0 in 0/51 Lambda= 0.116806 statistics sampled from 11865 (11888) to 11865 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.729), E-opt: 0.2 (0.365), width: 16 Scan time: 2.520 The best scores are: opt bits E(32554) CCDS43623.1 ZCWPW1 gene_id:55063|Hs108|chr7 ( 648) 2522 436.1 5.5e-122 CCDS59067.1 ZCWPW1 gene_id:55063|Hs108|chr7 ( 524) 2418 418.5 8.7e-117 >>CCDS43623.1 ZCWPW1 gene_id:55063|Hs108|chr7 (648 aa) initn: 1974 init1: 1974 opt: 2522 Z-score: 2303.6 bits: 436.1 E(32554): 5.5e-122 Smith-Waterman score: 2980; 89.4% identity (89.8% similar) in 509 aa overlap (1-458:122-629) 10 20 30 pF1KE5 MGSGLDFAETSCAQPVVSTQSDKEPGITAS :::::::::::::::::::::::::::::: CCDS43 KEKEKSSLTNAEFEEIVQIVLQKSLQECLGMGSGLDFAETSCAQPVVSTQSDKEPGITAS 100 110 120 130 140 150 40 50 60 70 80 90 pF1KE5 AADTDNANGEEVPHTQEISVSWEGEAAPEIRTSKLGQPDPAPSKKKSNRLTLSKRKKEAQ :.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::. CCDS43 ATDTDNANGEEVPHTQEISVSWEGEAAPEIRTSKLGQPDPAPSKKKSNRLTLSKRKKEAH 160 170 180 190 200 210 100 110 120 130 140 150 pF1KE5 DEKVEKTQGGHEHRQEDRLKKTVQDHSQIRDQQKGEISGFGQCLVWVQCSFPNCGKWRRL ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 -EKVEKTQGGHEHRQEDRLKKTVQDHSQIRDQQKGEISGFGQCLVWVQCSFPNCGKWRRL 220 230 240 250 260 270 160 170 180 190 200 210 pF1KE5 CGNIDPSVLPDNWSCDQNTDVQYNRCDIPEETWTGLESDVAYASYIPGSIIWAKQYGYPW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 CGNIDPSVLPDNWSCDQNTDVQYNRCDIPEETWTGLESDVAYASYIPGSIIWAKQYGYPW 280 290 300 310 320 330 220 230 240 250 260 270 pF1KE5 WPGMIESDPDLGEYFLFTSHLDSLPSKYHVTFFGETVSRAWIPVNMLKNFQELSLELSVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 WPGMIESDPDLGEYFLFTSHLDSLPSKYHVTFFGETVSRAWIPVNMLKNFQELSLELSVM 340 350 360 370 380 390 280 290 300 310 320 330 pF1KE5 KKRRNDCSQKLGVALMMAQEAEQISIQERVNLFGFWSRFNGSNSNGERKDLQLSGLNSPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 KKRRNDCSQKLGVALMMAQEAEQISIQERVNLFGFWSRFNGSNSNGERKDLQLSGLNSPG 400 410 420 430 440 450 340 350 360 370 pF1KE5 SCLEKKEKEEELEKEEGEKTDPILPIRKRVKIQTQKTKPRG------------------- ::::::::::::::::::::::::::::::::::::::::: CCDS43 SCLEKKEKEEELEKEEGEKTDPILPIRKRVKIQTQKTKPRGLGGDAGTADGRGRTLQRKI 460 470 480 490 500 510 380 390 pF1KE5 --------------------------------PKKKFKAPQSKALAASFSEGKEVRTVPK :::::::::::::::::::::::::::: CCDS43 MKRSLGRKSTAPPAPRMGRKEGQGNSDSDQPGPKKKFKAPQSKALAASFSEGKEVRTVPK 520 530 540 550 560 570 400 410 420 430 440 450 pF1KE5 NLGLSACKGACPSSAKEEPRHREPLTQEAGSVPLEDEASSDLDLEQLMEDVGRELGQSGE ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 NLGLSACKGACPSSAKEEPRHREPLTQEAGSVPLEDEASSDLDLEQLMEDVGRELGQSGE 580 590 600 610 620 630 460 470 pF1KE5 LQHSNSDGEDFPVALFGK CCDS43 LQHSNSDGEDFPVALFGK 640 >>CCDS59067.1 ZCWPW1 gene_id:55063|Hs108|chr7 (524 aa) initn: 2408 init1: 2408 opt: 2418 Z-score: 2210.2 bits: 418.5 E(32554): 8.7e-117 Smith-Waterman score: 2420; 85.3% identity (90.1% similar) in 423 aa overlap (1-423:122-524) 10 20 30 pF1KE5 MGSGLDFAETSCAQPVVSTQSDKEPGITAS :::::::::::::::::::::::::::::: CCDS59 KEKEKSSLTNAEFEEIVQIVLQKSLQECLGMGSGLDFAETSCAQPVVSTQSDKEPGITAS 100 110 120 130 140 150 40 50 60 70 80 90 pF1KE5 AADTDNANGEEVPHTQEISVSWEGEAAPEIRTSKLGQPDPAPSKKKSNRLTLSKRKKEAQ :.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 ATDTDNANGEEVPHTQEISVSWEGEAAPEIRTSKLGQPDPAPSKKKSNRLTLSKRKKEAQ 160 170 180 190 200 210 100 110 120 130 140 150 pF1KE5 DEKVEKTQGGHEHRQEDRLKKTVQDHSQIRDQQKGEISGFGQCLVWVQCSFPNCGKWRRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 DEKVEKTQGGHEHRQEDRLKKTVQDHSQIRDQQKGEISGFGQCLVWVQCSFPNCGKWRRL 220 230 240 250 260 270 160 170 180 190 200 210 pF1KE5 CGNIDPSVLPDNWSCDQNTDVQYNRCDIPEETWTGLESDVAYASYIPGSIIWAKQYGYPW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 CGNIDPSVLPDNWSCDQNTDVQYNRCDIPEETWTGLESDVAYASYIPGSIIWAKQYGYPW 280 290 300 310 320 330 220 230 240 250 260 270 pF1KE5 WPGMIESDPDLGEYFLFTSHLDSLPSKYHVTFFGETVSRAWIPVNMLKNFQELSLELSVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 WPGMIESDPDLGEYFLFTSHLDSLPSKYHVTFFGETVSRAWIPVNMLKNFQELSLELSVM 340 350 360 370 380 390 280 290 300 310 320 330 pF1KE5 KKRRNDCSQKLGVALMMAQEAEQISIQERVNLFGFWSRFNGSNSNGERKDLQLSGLNSPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 KKRRNDCSQKLGVALMMAQEAEQISIQERVNLFGFWSRFNGSNSNGERKDLQLSGLNSPG 400 410 420 430 440 450 340 350 360 370 380 390 pF1KE5 SCLEKKEKEEELEKEEGEKTDPILPIRKRVKIQTQKTKPRGPKKKFKAPQSKALAASFSE :::::::::::::::::::: .:: .:. ...: : .:.. CCDS59 SCLEKKEKEEELEKEEGEKT----ALRKNLKLP--RARPWQP--------------AFQR 460 470 480 490 400 410 420 430 440 450 pF1KE5 GKEVRTVPKNLGLSACKGACPSSAKEEPRHREPLTQEAGSVPLEDEASSDLDLEQLMEDV :... .. . . .: : :. : .: CCDS59 EKKLEQCQRTWAYQRVRGPAPHLRKKSPDTGNP 500 510 520 460 470 pF1KE5 GRELGQSGELQHSNSDGEDFPVALFGK 477 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 05:29:39 2016 done: Tue Nov 8 05:29:39 2016 Total Scan time: 2.520 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]