Result of FASTA (omim) for
pFN21AE6578
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6578, 104 aa
1>>>pF1KE6578 104 - 104 aa - 104 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.9977+/-0.000259; mu= 11.1580+/- 0.016
mean_var=53.9430+/-11.023, 0's: 0 Z-trim(121.0): 42 B-trim: 1323 in 2/52
Lambda= 0.174625
statistics sampled from 36911 (36954) to 36911 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.808), E-opt: 0.2 (0.433), width: 16
Scan time: 3.980
The best scores are: opt bits E(85289)
NP_065438 (OMIM: 125950) acyl-CoA-binding protein ( 104) 708 185.1 1.7e-47
NP_001269562 (OMIM: 125950) acyl-CoA-binding prote ( 104) 708 185.1 1.7e-47
NP_001269563 (OMIM: 125950) acyl-CoA-binding prote ( 104) 708 185.1 1.7e-47
NP_001171513 (OMIM: 125950) acyl-CoA-binding prote ( 104) 708 185.1 1.7e-47
NP_001269564 (OMIM: 125950) acyl-CoA-binding prote ( 104) 708 185.1 1.7e-47
NP_001171512 (OMIM: 125950) acyl-CoA-binding prote ( 129) 562 148.4 2.4e-36
NP_001073331 (OMIM: 125950) acyl-CoA-binding prote ( 87) 560 147.8 2.4e-36
NP_001171488 (OMIM: 125950) acyl-CoA-binding prote ( 148) 562 148.4 2.7e-36
NP_001171514 (OMIM: 125950) acyl-CoA-binding prote ( 97) 557 147.1 4.5e-36
NP_001073332 (OMIM: 125950) acyl-CoA-binding prote ( 88) 556 146.8 4.9e-36
NP_001269565 (OMIM: 125950) acyl-CoA-binding prote ( 63) 424 113.5 3.8e-26
NP_115736 (OMIM: 616352) acyl-CoA-binding domain-c ( 282) 229 64.7 8.6e-11
XP_016865659 (OMIM: 608024) PREDICTED: enoyl-CoA d ( 334) 225 63.7 2e-10
NP_006108 (OMIM: 608024) enoyl-CoA delta isomerase ( 364) 225 63.7 2.2e-10
XP_006715020 (OMIM: 608024) PREDICTED: enoyl-CoA d ( 364) 225 63.7 2.2e-10
NP_001159482 (OMIM: 608024) enoyl-CoA delta isomer ( 364) 225 63.7 2.2e-10
NP_996667 (OMIM: 608024) enoyl-CoA delta isomerase ( 394) 225 63.7 2.3e-10
XP_016872388 (OMIM: 616618) PREDICTED: acyl-CoA-bi ( 457) 222 63.0 4.5e-10
XP_016872387 (OMIM: 616618) PREDICTED: acyl-CoA-bi ( 466) 222 63.0 4.5e-10
XP_016872386 (OMIM: 616618) PREDICTED: acyl-CoA-bi ( 468) 222 63.0 4.5e-10
XP_016872383 (OMIM: 616618) PREDICTED: acyl-CoA-bi ( 521) 222 63.0 5e-10
NP_001258441 (OMIM: 616618) acyl-CoA-binding domai ( 523) 222 63.0 5e-10
NP_663736 (OMIM: 616618) acyl-CoA-binding domain-c ( 525) 222 63.0 5e-10
XP_016872382 (OMIM: 616618) PREDICTED: acyl-CoA-bi ( 530) 222 63.0 5.1e-10
XP_016872381 (OMIM: 616618) PREDICTED: acyl-CoA-bi ( 532) 222 63.0 5.1e-10
XP_016872380 (OMIM: 616618) PREDICTED: acyl-CoA-bi ( 534) 222 63.0 5.1e-10
XP_006717594 (OMIM: 616618) PREDICTED: acyl-CoA-bi ( 536) 222 63.0 5.1e-10
XP_016872378 (OMIM: 616618) PREDICTED: acyl-CoA-bi ( 541) 222 63.0 5.2e-10
XP_016872379 (OMIM: 616618) PREDICTED: acyl-CoA-bi ( 541) 222 63.0 5.2e-10
XP_006717593 (OMIM: 616618) PREDICTED: acyl-CoA-bi ( 543) 222 63.0 5.2e-10
XP_016872377 (OMIM: 616618) PREDICTED: acyl-CoA-bi ( 545) 222 63.0 5.2e-10
XP_016872376 (OMIM: 616618) PREDICTED: acyl-CoA-bi ( 552) 222 63.0 5.2e-10
XP_016872375 (OMIM: 616618) PREDICTED: acyl-CoA-bi ( 589) 222 63.0 5.6e-10
XP_016872374 (OMIM: 616618) PREDICTED: acyl-CoA-bi ( 598) 222 63.0 5.6e-10
XP_006717591 (OMIM: 616618) PREDICTED: acyl-CoA-bi ( 600) 222 63.0 5.6e-10
XP_016872373 (OMIM: 616618) PREDICTED: acyl-CoA-bi ( 609) 222 63.0 5.7e-10
XP_016872395 (OMIM: 616618) PREDICTED: acyl-CoA-bi ( 422) 216 61.5 1.2e-09
NP_001035938 (OMIM: 616618) acyl-CoA-binding domai ( 490) 216 61.5 1.3e-09
XP_016872385 (OMIM: 616618) PREDICTED: acyl-CoA-bi ( 499) 216 61.5 1.4e-09
XP_006717598 (OMIM: 616618) PREDICTED: acyl-CoA-bi ( 501) 216 61.5 1.4e-09
XP_016872384 (OMIM: 616618) PREDICTED: acyl-CoA-bi ( 510) 216 61.5 1.4e-09
>>NP_065438 (OMIM: 125950) acyl-CoA-binding protein isof (104 aa)
initn: 708 init1: 708 opt: 708 Z-score: 973.7 bits: 185.1 E(85289): 1.7e-47
Smith-Waterman score: 708; 100.0% identity (100.0% similar) in 104 aa overlap (1-104:1-104)
10 20 30 40 50 60
pF1KE6 MWGDLWLLPPASANPGTGTEAEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 MWGDLWLLPPASANPGTGTEAEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTE
10 20 30 40 50 60
70 80 90 100
pF1KE6 RPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINKVEELKKKYGI
::::::::::::::::::::::::::::::::::::::::::::
NP_065 RPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINKVEELKKKYGI
70 80 90 100
>>NP_001269562 (OMIM: 125950) acyl-CoA-binding protein i (104 aa)
initn: 708 init1: 708 opt: 708 Z-score: 973.7 bits: 185.1 E(85289): 1.7e-47
Smith-Waterman score: 708; 100.0% identity (100.0% similar) in 104 aa overlap (1-104:1-104)
10 20 30 40 50 60
pF1KE6 MWGDLWLLPPASANPGTGTEAEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MWGDLWLLPPASANPGTGTEAEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTE
10 20 30 40 50 60
70 80 90 100
pF1KE6 RPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINKVEELKKKYGI
::::::::::::::::::::::::::::::::::::::::::::
NP_001 RPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINKVEELKKKYGI
70 80 90 100
>>NP_001269563 (OMIM: 125950) acyl-CoA-binding protein i (104 aa)
initn: 708 init1: 708 opt: 708 Z-score: 973.7 bits: 185.1 E(85289): 1.7e-47
Smith-Waterman score: 708; 100.0% identity (100.0% similar) in 104 aa overlap (1-104:1-104)
10 20 30 40 50 60
pF1KE6 MWGDLWLLPPASANPGTGTEAEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MWGDLWLLPPASANPGTGTEAEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTE
10 20 30 40 50 60
70 80 90 100
pF1KE6 RPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINKVEELKKKYGI
::::::::::::::::::::::::::::::::::::::::::::
NP_001 RPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINKVEELKKKYGI
70 80 90 100
>>NP_001171513 (OMIM: 125950) acyl-CoA-binding protein i (104 aa)
initn: 708 init1: 708 opt: 708 Z-score: 973.7 bits: 185.1 E(85289): 1.7e-47
Smith-Waterman score: 708; 100.0% identity (100.0% similar) in 104 aa overlap (1-104:1-104)
10 20 30 40 50 60
pF1KE6 MWGDLWLLPPASANPGTGTEAEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MWGDLWLLPPASANPGTGTEAEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTE
10 20 30 40 50 60
70 80 90 100
pF1KE6 RPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINKVEELKKKYGI
::::::::::::::::::::::::::::::::::::::::::::
NP_001 RPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINKVEELKKKYGI
70 80 90 100
>>NP_001269564 (OMIM: 125950) acyl-CoA-binding protein i (104 aa)
initn: 708 init1: 708 opt: 708 Z-score: 973.7 bits: 185.1 E(85289): 1.7e-47
Smith-Waterman score: 708; 100.0% identity (100.0% similar) in 104 aa overlap (1-104:1-104)
10 20 30 40 50 60
pF1KE6 MWGDLWLLPPASANPGTGTEAEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MWGDLWLLPPASANPGTGTEAEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTE
10 20 30 40 50 60
70 80 90 100
pF1KE6 RPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINKVEELKKKYGI
::::::::::::::::::::::::::::::::::::::::::::
NP_001 RPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINKVEELKKKYGI
70 80 90 100
>>NP_001171512 (OMIM: 125950) acyl-CoA-binding protein i (129 aa)
initn: 562 init1: 562 opt: 562 Z-score: 773.4 bits: 148.4 E(85289): 2.4e-36
Smith-Waterman score: 562; 100.0% identity (100.0% similar) in 85 aa overlap (20-104:45-129)
10 20 30 40
pF1KE6 MWGDLWLLPPASANPGTGTEAEFEKAAEEVRHLKTKPSDEEMLFIYGHY
::::::::::::::::::::::::::::::
NP_001 RGVRGRELGGQGKYGAGCSECGTRRIAARGEAEFEKAAEEVRHLKTKPSDEEMLFIYGHY
20 30 40 50 60 70
50 60 70 80 90 100
pF1KE6 KQATVGDINTERPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINKVEELKKKYGI
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KQATVGDINTERPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINKVEELKKKYGI
80 90 100 110 120
>>NP_001073331 (OMIM: 125950) acyl-CoA-binding protein i (87 aa)
initn: 560 init1: 560 opt: 560 Z-score: 773.4 bits: 147.8 E(85289): 2.4e-36
Smith-Waterman score: 560; 97.7% identity (100.0% similar) in 86 aa overlap (19-104:2-87)
10 20 30 40 50 60
pF1KE6 MWGDLWLLPPASANPGTGTEAEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTE
..::::::::::::::::::::::::::::::::::::::::
NP_001 MSQAEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTE
10 20 30 40
70 80 90 100
pF1KE6 RPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINKVEELKKKYGI
::::::::::::::::::::::::::::::::::::::::::::
NP_001 RPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINKVEELKKKYGI
50 60 70 80
>>NP_001171488 (OMIM: 125950) acyl-CoA-binding protein i (148 aa)
initn: 562 init1: 562 opt: 562 Z-score: 772.5 bits: 148.4 E(85289): 2.7e-36
Smith-Waterman score: 562; 100.0% identity (100.0% similar) in 85 aa overlap (20-104:64-148)
10 20 30 40
pF1KE6 MWGDLWLLPPASANPGTGTEAEFEKAAEEVRHLKTKPSDEEMLFIYGHY
::::::::::::::::::::::::::::::
NP_001 RGVRGRELGGQGKYGAGCSECGTRRIAARGEAEFEKAAEEVRHLKTKPSDEEMLFIYGHY
40 50 60 70 80 90
50 60 70 80 90 100
pF1KE6 KQATVGDINTERPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINKVEELKKKYGI
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KQATVGDINTERPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINKVEELKKKYGI
100 110 120 130 140
>>NP_001171514 (OMIM: 125950) acyl-CoA-binding protein i (97 aa)
initn: 557 init1: 557 opt: 557 Z-score: 768.6 bits: 147.1 E(85289): 4.5e-36
Smith-Waterman score: 557; 98.8% identity (100.0% similar) in 85 aa overlap (20-104:13-97)
10 20 30 40 50 60
pF1KE6 MWGDLWLLPPASANPGTGTEAEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTE
.::::::::::::::::::::::::::::::::::::::::
NP_001 MSQVQRVHSQAAKAEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTE
10 20 30 40 50
70 80 90 100
pF1KE6 RPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINKVEELKKKYGI
::::::::::::::::::::::::::::::::::::::::::::
NP_001 RPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINKVEELKKKYGI
60 70 80 90
>>NP_001073332 (OMIM: 125950) acyl-CoA-binding protein i (88 aa)
initn: 556 init1: 556 opt: 556 Z-score: 767.9 bits: 146.8 E(85289): 4.9e-36
Smith-Waterman score: 556; 100.0% identity (100.0% similar) in 84 aa overlap (21-104:5-88)
10 20 30 40 50 60
pF1KE6 MWGDLWLLPPASANPGTGTEAEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTE
::::::::::::::::::::::::::::::::::::::::
NP_001 MPAFAEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTE
10 20 30 40
70 80 90 100
pF1KE6 RPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINKVEELKKKYGI
::::::::::::::::::::::::::::::::::::::::::::
NP_001 RPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINKVEELKKKYGI
50 60 70 80
104 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 14:33:11 2016 done: Tue Nov 8 14:33:11 2016
Total Scan time: 3.980 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]