Result of FASTA (ccds) for
pFN21AE6578
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6578, 104 aa
1>>>pF1KE6578 104 - 104 aa - 104 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.9082+/-0.000494; mu= 11.5658+/- 0.030
mean_var=51.5336+/-10.120, 0's: 0 Z-trim(113.9): 19 B-trim: 11 in 1/50
Lambda= 0.178661
statistics sampled from 14495 (14514) to 14495 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.816), E-opt: 0.2 (0.446), width: 16
Scan time: 1.290
The best scores are: opt bits E(32554)
CCDS2126.1 DBI gene_id:1622|Hs108|chr2 ( 104) 708 189.0 4.4e-49
CCDS54390.1 DBI gene_id:1622|Hs108|chr2 ( 129) 562 151.4 1.1e-37
CCDS42740.1 DBI gene_id:1622|Hs108|chr2 ( 87) 560 150.9 1.1e-37
CCDS54391.1 DBI gene_id:1622|Hs108|chr2 ( 148) 562 151.5 1.3e-37
CCDS74568.1 DBI gene_id:1622|Hs108|chr2 ( 97) 557 150.1 2.1e-37
CCDS42741.1 DBI gene_id:1622|Hs108|chr2 ( 88) 556 149.8 2.4e-37
CCDS31153.1 ACBD7 gene_id:414149|Hs108|chr10 ( 88) 349 96.5 2.7e-21
CCDS45711.1 ACBD4 gene_id:79777|Hs108|chr17 ( 268) 231 66.3 1e-11
CCDS42348.1 ACBD4 gene_id:79777|Hs108|chr17 ( 305) 231 66.3 1.2e-11
CCDS45710.1 ACBD4 gene_id:79777|Hs108|chr17 ( 341) 231 66.3 1.3e-11
CCDS1339.1 ACBD6 gene_id:84320|Hs108|chr1 ( 282) 229 65.7 1.5e-11
CCDS4490.1 ECI2 gene_id:10455|Hs108|chr6 ( 364) 225 64.8 3.9e-11
CCDS43420.2 ECI2 gene_id:10455|Hs108|chr6 ( 394) 225 64.8 4.2e-11
CCDS73079.1 ACBD5 gene_id:91452|Hs108|chr10 ( 523) 222 64.1 9.3e-11
CCDS44368.1 ACBD5 gene_id:91452|Hs108|chr10 ( 525) 222 64.1 9.3e-11
>>CCDS2126.1 DBI gene_id:1622|Hs108|chr2 (104 aa)
initn: 708 init1: 708 opt: 708 Z-score: 994.7 bits: 189.0 E(32554): 4.4e-49
Smith-Waterman score: 708; 100.0% identity (100.0% similar) in 104 aa overlap (1-104:1-104)
10 20 30 40 50 60
pF1KE6 MWGDLWLLPPASANPGTGTEAEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS21 MWGDLWLLPPASANPGTGTEAEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTE
10 20 30 40 50 60
70 80 90 100
pF1KE6 RPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINKVEELKKKYGI
::::::::::::::::::::::::::::::::::::::::::::
CCDS21 RPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINKVEELKKKYGI
70 80 90 100
>>CCDS54390.1 DBI gene_id:1622|Hs108|chr2 (129 aa)
initn: 562 init1: 562 opt: 562 Z-score: 789.8 bits: 151.4 E(32554): 1.1e-37
Smith-Waterman score: 562; 100.0% identity (100.0% similar) in 85 aa overlap (20-104:45-129)
10 20 30 40
pF1KE6 MWGDLWLLPPASANPGTGTEAEFEKAAEEVRHLKTKPSDEEMLFIYGHY
::::::::::::::::::::::::::::::
CCDS54 RGVRGRELGGQGKYGAGCSECGTRRIAARGEAEFEKAAEEVRHLKTKPSDEEMLFIYGHY
20 30 40 50 60 70
50 60 70 80 90 100
pF1KE6 KQATVGDINTERPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINKVEELKKKYGI
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 KQATVGDINTERPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINKVEELKKKYGI
80 90 100 110 120
>>CCDS42740.1 DBI gene_id:1622|Hs108|chr2 (87 aa)
initn: 560 init1: 560 opt: 560 Z-score: 789.7 bits: 150.9 E(32554): 1.1e-37
Smith-Waterman score: 560; 97.7% identity (100.0% similar) in 86 aa overlap (19-104:2-87)
10 20 30 40 50 60
pF1KE6 MWGDLWLLPPASANPGTGTEAEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTE
..::::::::::::::::::::::::::::::::::::::::
CCDS42 MSQAEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTE
10 20 30 40
70 80 90 100
pF1KE6 RPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINKVEELKKKYGI
::::::::::::::::::::::::::::::::::::::::::::
CCDS42 RPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINKVEELKKKYGI
50 60 70 80
>>CCDS54391.1 DBI gene_id:1622|Hs108|chr2 (148 aa)
initn: 562 init1: 562 opt: 562 Z-score: 788.9 bits: 151.5 E(32554): 1.3e-37
Smith-Waterman score: 562; 100.0% identity (100.0% similar) in 85 aa overlap (20-104:64-148)
10 20 30 40
pF1KE6 MWGDLWLLPPASANPGTGTEAEFEKAAEEVRHLKTKPSDEEMLFIYGHY
::::::::::::::::::::::::::::::
CCDS54 RGVRGRELGGQGKYGAGCSECGTRRIAARGEAEFEKAAEEVRHLKTKPSDEEMLFIYGHY
40 50 60 70 80 90
50 60 70 80 90 100
pF1KE6 KQATVGDINTERPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINKVEELKKKYGI
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 KQATVGDINTERPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINKVEELKKKYGI
100 110 120 130 140
>>CCDS74568.1 DBI gene_id:1622|Hs108|chr2 (97 aa)
initn: 557 init1: 557 opt: 557 Z-score: 784.8 bits: 150.1 E(32554): 2.1e-37
Smith-Waterman score: 557; 98.8% identity (100.0% similar) in 85 aa overlap (20-104:13-97)
10 20 30 40 50 60
pF1KE6 MWGDLWLLPPASANPGTGTEAEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTE
.::::::::::::::::::::::::::::::::::::::::
CCDS74 MSQVQRVHSQAAKAEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTE
10 20 30 40 50
70 80 90 100
pF1KE6 RPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINKVEELKKKYGI
::::::::::::::::::::::::::::::::::::::::::::
CCDS74 RPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINKVEELKKKYGI
60 70 80 90
>>CCDS42741.1 DBI gene_id:1622|Hs108|chr2 (88 aa)
initn: 556 init1: 556 opt: 556 Z-score: 784.1 bits: 149.8 E(32554): 2.4e-37
Smith-Waterman score: 556; 100.0% identity (100.0% similar) in 84 aa overlap (21-104:5-88)
10 20 30 40 50 60
pF1KE6 MWGDLWLLPPASANPGTGTEAEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTE
::::::::::::::::::::::::::::::::::::::::
CCDS42 MPAFAEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTE
10 20 30 40
70 80 90 100
pF1KE6 RPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINKVEELKKKYGI
::::::::::::::::::::::::::::::::::::::::::::
CCDS42 RPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINKVEELKKKYGI
50 60 70 80
>>CCDS31153.1 ACBD7 gene_id:414149|Hs108|chr10 (88 aa)
initn: 349 init1: 349 opt: 349 Z-score: 495.7 bits: 96.5 E(32554): 2.7e-21
Smith-Waterman score: 349; 61.2% identity (82.4% similar) in 85 aa overlap (20-104:4-88)
10 20 30 40 50 60
pF1KE6 MWGDLWLLPPASANPGTGTEAEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTE
.:.:..:::.::.::..:.: :. .:: :::: :::::
CCDS31 MALQADFDRAAEDVRKLKARPDDGELKELYGLYKQAIVGDINIA
10 20 30 40
70 80 90 100
pF1KE6 RPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINKVEELKKKYGI
:::::. :::::.::: :: : ::: .:::.:..:: .::::
CCDS31 CPGMLDLKGKAKWEAWNLKKGLSTEDATSAYISKAKELIEKYGI
50 60 70 80
>>CCDS45711.1 ACBD4 gene_id:79777|Hs108|chr17 (268 aa)
initn: 219 init1: 219 opt: 231 Z-score: 323.7 bits: 66.3 E(32554): 1e-11
Smith-Waterman score: 231; 40.2% identity (67.4% similar) in 92 aa overlap (14-101:7-98)
10 20 30 40 50
pF1KE6 MWGDLWLLPPASANPGTGTEAEFEKAAEEVRHLKT----KPSDEEMLFIYGHYKQATVGD
.: . .:. :. ...: .:: :::: .:..:::::.:
CCDS45 MGTEKESPEPDCQKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGP
10 20 30 40 50
60 70 80 90 100
pF1KE6 INTERPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINKVEELKKKYGI
. :::. : :. :::::: : :.:.::.:::.... . .:
CCDS45 CLVPRPGFWDPIGRYKWDAWNSLGKMSREEAMSAYITEMKLVAQKVIDTVPLGEVAEDMF
60 70 80 90 100 110
CCDS45 GYFEPLYQVIPDMPRPPETFLRRVTGWKEQVVNGDVGAVSEPPCLPKEPAPPSPESHSPR
120 130 140 150 160 170
>>CCDS42348.1 ACBD4 gene_id:79777|Hs108|chr17 (305 aa)
initn: 219 init1: 219 opt: 231 Z-score: 322.9 bits: 66.3 E(32554): 1.2e-11
Smith-Waterman score: 231; 40.2% identity (67.4% similar) in 92 aa overlap (14-101:7-98)
10 20 30 40 50
pF1KE6 MWGDLWLLPPASANPGTGTEAEFEKAAEEVRHLKT----KPSDEEMLFIYGHYKQATVGD
.: . .:. :. ...: .:: :::: .:..:::::.:
CCDS42 MGTEKESPEPDCQKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGP
10 20 30 40 50
60 70 80 90 100
pF1KE6 INTERPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINKVEELKKKYGI
. :::. : :. :::::: : :.:.::.:::.... . .:
CCDS42 CLVPRPGFWDPIGRYKWDAWNSLGKMSREEAMSAYITEMKLVAQKVIDTVPLGEVAEDMF
60 70 80 90 100 110
CCDS42 GYFEPLYQVIPDMPRPPETFLRRVTGWKEQVVNGDVGAVSEPPCLPKEPAPPSPESHSPR
120 130 140 150 160 170
>>CCDS45710.1 ACBD4 gene_id:79777|Hs108|chr17 (341 aa)
initn: 219 init1: 219 opt: 231 Z-score: 322.1 bits: 66.3 E(32554): 1.3e-11
Smith-Waterman score: 231; 40.2% identity (67.4% similar) in 92 aa overlap (14-101:7-98)
10 20 30 40 50
pF1KE6 MWGDLWLLPPASANPGTGTEAEFEKAAEEVRHLKT----KPSDEEMLFIYGHYKQATVGD
.: . .:. :. ...: .:: :::: .:..:::::.:
CCDS45 MGTEKESPEPDCQKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGP
10 20 30 40 50
60 70 80 90 100
pF1KE6 INTERPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINKVEELKKKYGI
. :::. : :. :::::: : :.:.::.:::.... . .:
CCDS45 CLVPRPGFWDPIGRYKWDAWNSLGKMSREEAMSAYITEMKLVAQKVIDTVPLGEVAEDMF
60 70 80 90 100 110
CCDS45 GYFEPLYQVIPDMPRPPETFLRRVTGWKEQVVNGDVGAVSEPPCLPKEPAPPSPASLWAV
120 130 140 150 160 170
104 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 14:33:10 2016 done: Tue Nov 8 14:33:11 2016
Total Scan time: 1.290 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]