FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6576, 107 aa 1>>>pF1KE6576 107 - 107 aa - 107 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.2929+/-0.0005; mu= 11.0219+/- 0.030 mean_var=71.6083+/-14.499, 0's: 0 Z-trim(116.1): 8 B-trim: 39 in 2/48 Lambda= 0.151563 statistics sampled from 16639 (16647) to 16639 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.849), E-opt: 0.2 (0.511), width: 16 Scan time: 1.290 The best scores are: opt bits E(32554) CCDS59373.1 C19orf12 gene_id:83636|Hs108|chr19 ( 107) 740 169.3 4.1e-43 CCDS12418.2 C19orf12 gene_id:83636|Hs108|chr19 ( 141) 636 146.6 3.6e-36 CCDS42542.1 C19orf12 gene_id:83636|Hs108|chr19 ( 152) 636 146.6 3.8e-36 >>CCDS59373.1 C19orf12 gene_id:83636|Hs108|chr19 (107 aa) initn: 740 init1: 740 opt: 740 Z-score: 887.5 bits: 169.3 E(32554): 4.1e-43 Smith-Waterman score: 740; 100.0% identity (100.0% similar) in 107 aa overlap (1-107:1-107) 10 20 30 40 50 60 pF1KE6 MTIMVEDIMKLLCSLSGERKMKAAVKHSGKGALVTGAMAFVGGLVGGPPGLAVGGAVGGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 MTIMVEDIMKLLCSLSGERKMKAAVKHSGKGALVTGAMAFVGGLVGGPPGLAVGGAVGGL 10 20 30 40 50 60 70 80 90 100 pF1KE6 LGAWMTSGQFKPVPQILMELPPAEQQRLFNEAAAIIRPCSSSCWPCW ::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 LGAWMTSGQFKPVPQILMELPPAEQQRLFNEAAAIIRPCSSSCWPCW 70 80 90 100 >>CCDS12418.2 C19orf12 gene_id:83636|Hs108|chr19 (141 aa) initn: 636 init1: 636 opt: 636 Z-score: 762.8 bits: 146.6 E(32554): 3.6e-36 Smith-Waterman score: 636; 100.0% identity (100.0% similar) in 97 aa overlap (1-97:1-97) 10 20 30 40 50 60 pF1KE6 MTIMVEDIMKLLCSLSGERKMKAAVKHSGKGALVTGAMAFVGGLVGGPPGLAVGGAVGGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 MTIMVEDIMKLLCSLSGERKMKAAVKHSGKGALVTGAMAFVGGLVGGPPGLAVGGAVGGL 10 20 30 40 50 60 70 80 90 100 pF1KE6 LGAWMTSGQFKPVPQILMELPPAEQQRLFNEAAAIIRPCSSSCWPCW ::::::::::::::::::::::::::::::::::::: CCDS12 LGAWMTSGQFKPVPQILMELPPAEQQRLFNEAAAIIRHLEWTDAVQLTALVMGSEALQQQ 70 80 90 100 110 120 CCDS12 LLAMLVNYVTKELRAEIQYDD 130 140 >>CCDS42542.1 C19orf12 gene_id:83636|Hs108|chr19 (152 aa) initn: 636 init1: 636 opt: 636 Z-score: 762.4 bits: 146.6 E(32554): 3.8e-36 Smith-Waterman score: 636; 100.0% identity (100.0% similar) in 97 aa overlap (1-97:12-108) 10 20 30 40 pF1KE6 MTIMVEDIMKLLCSLSGERKMKAAVKHSGKGALVTGAMAFVGGLVGGPP ::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 MERLKSHKPATMTIMVEDIMKLLCSLSGERKMKAAVKHSGKGALVTGAMAFVGGLVGGPP 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE6 GLAVGGAVGGLLGAWMTSGQFKPVPQILMELPPAEQQRLFNEAAAIIRPCSSSCWPCW :::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 GLAVGGAVGGLLGAWMTSGQFKPVPQILMELPPAEQQRLFNEAAAIIRHLEWTDAVQLTA 70 80 90 100 110 120 CCDS42 LVMGSEALQQQLLAMLVNYVTKELRAEIQYDD 130 140 150 107 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 14:32:20 2016 done: Tue Nov 8 14:32:21 2016 Total Scan time: 1.290 Total Display time: -0.040 Function used was FASTA [36.3.4 Apr, 2011]