FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5186, 79 aa 1>>>pF1KE5186 79 - 79 aa - 79 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.6340+/-0.000504; mu= 10.5049+/- 0.030 mean_var=46.1931+/- 9.222, 0's: 0 Z-trim(112.5): 12 B-trim: 0 in 0/49 Lambda= 0.188706 statistics sampled from 13249 (13261) to 13249 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.804), E-opt: 0.2 (0.407), width: 16 Scan time: 1.370 The best scores are: opt bits E(32554) CCDS11573.1 LUC7L3 gene_id:51747|Hs108|chr17 ( 432) 385 111.5 3.1e-25 CCDS82158.1 LUC7L3 gene_id:51747|Hs108|chr17 ( 489) 385 111.5 3.4e-25 >>CCDS11573.1 LUC7L3 gene_id:51747|Hs108|chr17 (432 aa) initn: 385 init1: 385 opt: 385 Z-score: 566.6 bits: 111.5 E(32554): 3.1e-25 Smith-Waterman score: 385; 100.0% identity (100.0% similar) in 55 aa overlap (1-55:1-55) 10 20 30 40 50 60 pF1KE5 MISAAQLLDELMGRDRNLAPDEKRSNVRWDHESVCKYYLCGFCPAELFTNTRSDLDVFGR ::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 MISAAQLLDELMGRDRNLAPDEKRSNVRWDHESVCKYYLCGFCPAELFTNTRSDLGPCEK 10 20 30 40 50 60 70 pF1KE5 GDNISDVSKFLEDDKWMEE CCDS11 IHDENLRKQYEKSSRFMKVGYERDFLRYLQSLLAEVERRIRRGHARLALSQNQQSSGAAG 70 80 90 100 110 120 >>CCDS82158.1 LUC7L3 gene_id:51747|Hs108|chr17 (489 aa) initn: 385 init1: 385 opt: 385 Z-score: 565.8 bits: 111.5 E(32554): 3.4e-25 Smith-Waterman score: 385; 100.0% identity (100.0% similar) in 55 aa overlap (1-55:1-55) 10 20 30 40 50 60 pF1KE5 MISAAQLLDELMGRDRNLAPDEKRSNVRWDHESVCKYYLCGFCPAELFTNTRSDLDVFGR ::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 MISAAQLLDELMGRDRNLAPDEKRSNVRWDHESVCKYYLCGFCPAELFTNTRSDLGPCEK 10 20 30 40 50 60 70 pF1KE5 GDNISDVSKFLEDDKWMEE CCDS82 IHDENLRKQYEKSSRFMKVGYERDFLRYLQSLLAEVERRIRRGHARLALSQNQQSSGAAG 70 80 90 100 110 120 79 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 22:23:52 2016 done: Mon Nov 7 22:23:52 2016 Total Scan time: 1.370 Total Display time: -0.040 Function used was FASTA [36.3.4 Apr, 2011]