FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5291, 244 aa 1>>>pF1KE5291 244 - 244 aa - 244 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.6325+/-0.00133; mu= 4.2079+/- 0.079 mean_var=127.6643+/-25.781, 0's: 0 Z-trim(103.1): 35 B-trim: 99 in 2/50 Lambda= 0.113511 statistics sampled from 7234 (7247) to 7234 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.556), E-opt: 0.2 (0.223), width: 16 Scan time: 1.950 The best scores are: opt bits E(32554) CCDS9067.1 IKBIP gene_id:121457|Hs108|chr12 ( 350) 1468 251.8 4.5e-67 >>CCDS9067.1 IKBIP gene_id:121457|Hs108|chr12 (350 aa) initn: 1468 init1: 1468 opt: 1468 Z-score: 1317.7 bits: 251.8 E(32554): 4.5e-67 Smith-Waterman score: 1468; 99.6% identity (100.0% similar) in 244 aa overlap (1-244:107-350) 10 20 30 pF1KE5 MEQLKSFQIIAHLKRLQEEINEVKTWSNRI :::::::::::::::::::::::::::::: CCDS90 QLLKLETNEFQQLQSKISLISEKWQKSEAIMEQLKSFQIIAHLKRLQEEINEVKTWSNRI 80 90 100 110 120 130 40 50 60 70 80 90 pF1KE5 TEKQDILNNSLTTLSQDITKVDQSTTSMAKDVGLKITSVKTDIRRISGLVTDVISLTDSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS90 TEKQDILNNSLTTLSQDITKVDQSTTSMAKDVGLKITSVKTDIRRISGLVTDVISLTDSV 140 150 160 170 180 190 100 110 120 130 140 150 pF1KE5 QELENKIEKVEKNTVKNIGDLLSSSIDRTATLRKTASENSQRINSVKKTLTELKSDFDKH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS90 QELENKIEKVEKNTVKNIGDLLSSSIDRTATLRKTASENSQRINSVKKTLTELKSDFDKH 200 210 220 230 240 250 160 170 180 190 200 210 pF1KE5 TDRFLSLESDRAKVLKTVTFANDLKPKVYNLKKDFSRLEPLVNDLTLRIGRLVTDLLQRE ::::::::.::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS90 TDRFLSLEGDRAKVLKTVTFANDLKPKVYNLKKDFSRLEPLVNDLTLRIGRLVTDLLQRE 260 270 280 290 300 310 220 230 240 pF1KE5 KEIAFLSEKISNLTIVQAEIKDIKDEIAHISDMN :::::::::::::::::::::::::::::::::: CCDS90 KEIAFLSEKISNLTIVQAEIKDIKDEIAHISDMN 320 330 340 350 244 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 23:27:35 2016 done: Mon Nov 7 23:27:36 2016 Total Scan time: 1.950 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]