Result of FASTA (omim) for
pFN21AE5177
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5177, 151 aa
1>>>pF1KE5177 151 - 151 aa - 151 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.9333+/-0.00035; mu= 10.1563+/- 0.022
mean_var=101.0674+/-19.704, 0's: 0 Z-trim(117.0): 36 B-trim: 58 in 1/51
Lambda= 0.127576
statistics sampled from 28595 (28631) to 28595 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.709), E-opt: 0.2 (0.336), width: 16
Scan time: 5.150
The best scores are: opt bits E(85289)
XP_016876368 (OMIM: 604601) PREDICTED: peptide cha ( 257) 968 187.9 9.1e-48
XP_011533629 (OMIM: 604601) PREDICTED: peptide cha ( 309) 968 188.0 1e-47
XP_016876367 (OMIM: 604601) PREDICTED: peptide cha ( 332) 968 188.0 1.1e-47
XP_011533628 (OMIM: 604601) PREDICTED: peptide cha ( 384) 968 188.0 1.2e-47
XP_016876361 (OMIM: 604601) PREDICTED: peptide cha ( 390) 968 188.0 1.3e-47
XP_016876359 (OMIM: 604601) PREDICTED: peptide cha ( 444) 968 188.1 1.4e-47
XP_016876360 (OMIM: 604601) PREDICTED: peptide cha ( 444) 968 188.1 1.4e-47
XP_011533627 (OMIM: 604601) PREDICTED: peptide cha ( 445) 968 188.1 1.4e-47
XP_016876356 (OMIM: 604601) PREDICTED: peptide cha ( 445) 968 188.1 1.4e-47
XP_005266656 (OMIM: 604601) PREDICTED: peptide cha ( 445) 968 188.1 1.4e-47
XP_006719960 (OMIM: 604601) PREDICTED: peptide cha ( 445) 968 188.1 1.4e-47
XP_016876355 (OMIM: 604601) PREDICTED: peptide cha ( 445) 968 188.1 1.4e-47
XP_011533622 (OMIM: 604601) PREDICTED: peptide cha ( 445) 968 188.1 1.4e-47
XP_016876351 (OMIM: 604601) PREDICTED: peptide cha ( 445) 968 188.1 1.4e-47
XP_016876362 (OMIM: 604601) PREDICTED: peptide cha ( 445) 968 188.1 1.4e-47
XP_011533620 (OMIM: 604601) PREDICTED: peptide cha ( 445) 968 188.1 1.4e-47
XP_011533625 (OMIM: 604601) PREDICTED: peptide cha ( 445) 968 188.1 1.4e-47
XP_006719961 (OMIM: 604601) PREDICTED: peptide cha ( 445) 968 188.1 1.4e-47
XP_011533623 (OMIM: 604601) PREDICTED: peptide cha ( 445) 968 188.1 1.4e-47
NP_004285 (OMIM: 604601) peptide chain release fac ( 445) 968 188.1 1.4e-47
XP_016876363 (OMIM: 604601) PREDICTED: peptide cha ( 445) 968 188.1 1.4e-47
XP_016876358 (OMIM: 604601) PREDICTED: peptide cha ( 445) 968 188.1 1.4e-47
XP_006719963 (OMIM: 604601) PREDICTED: peptide cha ( 445) 968 188.1 1.4e-47
XP_016876354 (OMIM: 604601) PREDICTED: peptide cha ( 445) 968 188.1 1.4e-47
XP_016876364 (OMIM: 604601) PREDICTED: peptide cha ( 445) 968 188.1 1.4e-47
XP_016876353 (OMIM: 604601) PREDICTED: peptide cha ( 445) 968 188.1 1.4e-47
XP_016876357 (OMIM: 604601) PREDICTED: peptide cha ( 445) 968 188.1 1.4e-47
XP_016876352 (OMIM: 604601) PREDICTED: peptide cha ( 445) 968 188.1 1.4e-47
XP_016876350 (OMIM: 604601) PREDICTED: peptide cha ( 457) 968 188.1 1.4e-47
XP_016876349 (OMIM: 604601) PREDICTED: peptide cha ( 458) 968 188.1 1.4e-47
XP_011533619 (OMIM: 604601) PREDICTED: peptide cha ( 458) 968 188.1 1.4e-47
XP_016876348 (OMIM: 604601) PREDICTED: peptide cha ( 496) 968 188.1 1.5e-47
XP_011533617 (OMIM: 604601) PREDICTED: peptide cha ( 497) 968 188.1 1.5e-47
XP_016876347 (OMIM: 604601) PREDICTED: peptide cha ( 497) 968 188.1 1.5e-47
XP_016876346 (OMIM: 604601) PREDICTED: peptide cha ( 497) 968 188.1 1.5e-47
XP_016876345 (OMIM: 604601) PREDICTED: peptide cha ( 497) 968 188.1 1.5e-47
>>XP_016876368 (OMIM: 604601) PREDICTED: peptide chain r (257 aa)
initn: 968 init1: 968 opt: 968 Z-score: 978.5 bits: 187.9 E(85289): 9.1e-48
Smith-Waterman score: 968; 100.0% identity (100.0% similar) in 138 aa overlap (1-138:1-138)
10 20 30 40 50 60
pF1KE5 MNRHLCVWLFRHPSLNGYLQCHIQLHSHQFRQIHLDTRLQVFRQNRNCILHLLSKNWSRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MNRHLCVWLFRHPSLNGYLQCHIQLHSHQFRQIHLDTRLQVFRQNRNCILHLLSKNWSRR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 YCHQDTKMLWKHKALQKYMENLSKEYQTLEQCLQHIPVNEENRRSLNRRHAELAPLAAIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YCHQDTKMLWKHKALQKYMENLSKEYQTLEQCLQHIPVNEENRRSLNRRHAELAPLAAIY
70 80 90 100 110 120
130 140 150
pF1KE5 QEIQETEQAIEELESMCKKTESCSVAQAGMQ
::::::::::::::::::
XP_016 QEIQETEQAIEELESMCKSLNKQDEKQLQELALEERQTIDQKINMLYNELFQSLVPKEKY
130 140 150 160 170 180
>>XP_011533629 (OMIM: 604601) PREDICTED: peptide chain r (309 aa)
initn: 968 init1: 968 opt: 968 Z-score: 977.4 bits: 188.0 E(85289): 1e-47
Smith-Waterman score: 968; 100.0% identity (100.0% similar) in 138 aa overlap (1-138:53-190)
10 20 30
pF1KE5 MNRHLCVWLFRHPSLNGYLQCHIQLHSHQF
::::::::::::::::::::::::::::::
XP_011 AISVHCNLRLPGSSDYPASASRAARTTDAEMNRHLCVWLFRHPSLNGYLQCHIQLHSHQF
30 40 50 60 70 80
40 50 60 70 80 90
pF1KE5 RQIHLDTRLQVFRQNRNCILHLLSKNWSRRYCHQDTKMLWKHKALQKYMENLSKEYQTLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RQIHLDTRLQVFRQNRNCILHLLSKNWSRRYCHQDTKMLWKHKALQKYMENLSKEYQTLE
90 100 110 120 130 140
100 110 120 130 140 150
pF1KE5 QCLQHIPVNEENRRSLNRRHAELAPLAAIYQEIQETEQAIEELESMCKKTESCSVAQAGM
::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QCLQHIPVNEENRRSLNRRHAELAPLAAIYQEIQETEQAIEELESMCKSLNKQDEKQLQE
150 160 170 180 190 200
pF1KE5 Q
XP_011 LALEERQTIDQKINMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGGDICQQFTREIFDM
210 220 230 240 250 260
>>XP_016876367 (OMIM: 604601) PREDICTED: peptide chain r (332 aa)
initn: 968 init1: 968 opt: 968 Z-score: 977.0 bits: 188.0 E(85289): 1.1e-47
Smith-Waterman score: 968; 100.0% identity (100.0% similar) in 138 aa overlap (1-138:1-138)
10 20 30 40 50 60
pF1KE5 MNRHLCVWLFRHPSLNGYLQCHIQLHSHQFRQIHLDTRLQVFRQNRNCILHLLSKNWSRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MNRHLCVWLFRHPSLNGYLQCHIQLHSHQFRQIHLDTRLQVFRQNRNCILHLLSKNWSRR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 YCHQDTKMLWKHKALQKYMENLSKEYQTLEQCLQHIPVNEENRRSLNRRHAELAPLAAIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YCHQDTKMLWKHKALQKYMENLSKEYQTLEQCLQHIPVNEENRRSLNRRHAELAPLAAIY
70 80 90 100 110 120
130 140 150
pF1KE5 QEIQETEQAIEELESMCKKTESCSVAQAGMQ
::::::::::::::::::
XP_016 QEIQETEQAIEELESMCKSLNKQDEKQLQELALEERQTIDQKINMLYNELFQSLVPKEKY
130 140 150 160 170 180
>>XP_011533628 (OMIM: 604601) PREDICTED: peptide chain r (384 aa)
initn: 968 init1: 968 opt: 968 Z-score: 976.2 bits: 188.0 E(85289): 1.2e-47
Smith-Waterman score: 968; 100.0% identity (100.0% similar) in 138 aa overlap (1-138:53-190)
10 20 30
pF1KE5 MNRHLCVWLFRHPSLNGYLQCHIQLHSHQF
::::::::::::::::::::::::::::::
XP_011 AISVHCNLRLPGSSDYPASASRAARTTDAEMNRHLCVWLFRHPSLNGYLQCHIQLHSHQF
30 40 50 60 70 80
40 50 60 70 80 90
pF1KE5 RQIHLDTRLQVFRQNRNCILHLLSKNWSRRYCHQDTKMLWKHKALQKYMENLSKEYQTLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RQIHLDTRLQVFRQNRNCILHLLSKNWSRRYCHQDTKMLWKHKALQKYMENLSKEYQTLE
90 100 110 120 130 140
100 110 120 130 140 150
pF1KE5 QCLQHIPVNEENRRSLNRRHAELAPLAAIYQEIQETEQAIEELESMCKKTESCSVAQAGM
::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QCLQHIPVNEENRRSLNRRHAELAPLAAIYQEIQETEQAIEELESMCKSLNKQDEKQLQE
150 160 170 180 190 200
pF1KE5 Q
XP_011 LALEERQTIDQKINMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGGDICQQFTREIFDM
210 220 230 240 250 260
>>XP_016876361 (OMIM: 604601) PREDICTED: peptide chain r (390 aa)
initn: 968 init1: 968 opt: 968 Z-score: 976.1 bits: 188.0 E(85289): 1.3e-47
Smith-Waterman score: 968; 100.0% identity (100.0% similar) in 138 aa overlap (1-138:53-190)
10 20 30
pF1KE5 MNRHLCVWLFRHPSLNGYLQCHIQLHSHQF
::::::::::::::::::::::::::::::
XP_016 AISVHCNLRLPGSSDYPASASRAARTTDAEMNRHLCVWLFRHPSLNGYLQCHIQLHSHQF
30 40 50 60 70 80
40 50 60 70 80 90
pF1KE5 RQIHLDTRLQVFRQNRNCILHLLSKNWSRRYCHQDTKMLWKHKALQKYMENLSKEYQTLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RQIHLDTRLQVFRQNRNCILHLLSKNWSRRYCHQDTKMLWKHKALQKYMENLSKEYQTLE
90 100 110 120 130 140
100 110 120 130 140 150
pF1KE5 QCLQHIPVNEENRRSLNRRHAELAPLAAIYQEIQETEQAIEELESMCKKTESCSVAQAGM
::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QCLQHIPVNEENRRSLNRRHAELAPLAAIYQEIQETEQAIEELESMCKSLNKQDEKQLQE
150 160 170 180 190 200
pF1KE5 Q
XP_016 LALEERQTIDQKINMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGGDICQQFTREIFDM
210 220 230 240 250 260
>>XP_016876359 (OMIM: 604601) PREDICTED: peptide chain r (444 aa)
initn: 968 init1: 968 opt: 968 Z-score: 975.3 bits: 188.1 E(85289): 1.4e-47
Smith-Waterman score: 968; 100.0% identity (100.0% similar) in 138 aa overlap (1-138:1-138)
10 20 30 40 50 60
pF1KE5 MNRHLCVWLFRHPSLNGYLQCHIQLHSHQFRQIHLDTRLQVFRQNRNCILHLLSKNWSRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MNRHLCVWLFRHPSLNGYLQCHIQLHSHQFRQIHLDTRLQVFRQNRNCILHLLSKNWSRR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 YCHQDTKMLWKHKALQKYMENLSKEYQTLEQCLQHIPVNEENRRSLNRRHAELAPLAAIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YCHQDTKMLWKHKALQKYMENLSKEYQTLEQCLQHIPVNEENRRSLNRRHAELAPLAAIY
70 80 90 100 110 120
130 140 150
pF1KE5 QEIQETEQAIEELESMCKKTESCSVAQAGMQ
::::::::::::::::::
XP_016 QEIQETEQAIEELESMCKSLNKQDEKQLQELALEERQTIDQKINMLYNELFQSLVPKEKY
130 140 150 160 170 180
>>XP_016876360 (OMIM: 604601) PREDICTED: peptide chain r (444 aa)
initn: 968 init1: 968 opt: 968 Z-score: 975.3 bits: 188.1 E(85289): 1.4e-47
Smith-Waterman score: 968; 100.0% identity (100.0% similar) in 138 aa overlap (1-138:1-138)
10 20 30 40 50 60
pF1KE5 MNRHLCVWLFRHPSLNGYLQCHIQLHSHQFRQIHLDTRLQVFRQNRNCILHLLSKNWSRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MNRHLCVWLFRHPSLNGYLQCHIQLHSHQFRQIHLDTRLQVFRQNRNCILHLLSKNWSRR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 YCHQDTKMLWKHKALQKYMENLSKEYQTLEQCLQHIPVNEENRRSLNRRHAELAPLAAIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YCHQDTKMLWKHKALQKYMENLSKEYQTLEQCLQHIPVNEENRRSLNRRHAELAPLAAIY
70 80 90 100 110 120
130 140 150
pF1KE5 QEIQETEQAIEELESMCKKTESCSVAQAGMQ
::::::::::::::::::
XP_016 QEIQETEQAIEELESMCKSLNKQDEKQLQELALEERQTIDQKINMLYNELFQSLVPKEKY
130 140 150 160 170 180
>>XP_011533627 (OMIM: 604601) PREDICTED: peptide chain r (445 aa)
initn: 968 init1: 968 opt: 968 Z-score: 975.3 bits: 188.1 E(85289): 1.4e-47
Smith-Waterman score: 968; 100.0% identity (100.0% similar) in 138 aa overlap (1-138:1-138)
10 20 30 40 50 60
pF1KE5 MNRHLCVWLFRHPSLNGYLQCHIQLHSHQFRQIHLDTRLQVFRQNRNCILHLLSKNWSRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MNRHLCVWLFRHPSLNGYLQCHIQLHSHQFRQIHLDTRLQVFRQNRNCILHLLSKNWSRR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 YCHQDTKMLWKHKALQKYMENLSKEYQTLEQCLQHIPVNEENRRSLNRRHAELAPLAAIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YCHQDTKMLWKHKALQKYMENLSKEYQTLEQCLQHIPVNEENRRSLNRRHAELAPLAAIY
70 80 90 100 110 120
130 140 150
pF1KE5 QEIQETEQAIEELESMCKKTESCSVAQAGMQ
::::::::::::::::::
XP_011 QEIQETEQAIEELESMCKSLNKQDEKQLQELALEERQTIDQKINMLYNELFQSLVPKEKY
130 140 150 160 170 180
>>XP_016876356 (OMIM: 604601) PREDICTED: peptide chain r (445 aa)
initn: 968 init1: 968 opt: 968 Z-score: 975.3 bits: 188.1 E(85289): 1.4e-47
Smith-Waterman score: 968; 100.0% identity (100.0% similar) in 138 aa overlap (1-138:1-138)
10 20 30 40 50 60
pF1KE5 MNRHLCVWLFRHPSLNGYLQCHIQLHSHQFRQIHLDTRLQVFRQNRNCILHLLSKNWSRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MNRHLCVWLFRHPSLNGYLQCHIQLHSHQFRQIHLDTRLQVFRQNRNCILHLLSKNWSRR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 YCHQDTKMLWKHKALQKYMENLSKEYQTLEQCLQHIPVNEENRRSLNRRHAELAPLAAIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YCHQDTKMLWKHKALQKYMENLSKEYQTLEQCLQHIPVNEENRRSLNRRHAELAPLAAIY
70 80 90 100 110 120
130 140 150
pF1KE5 QEIQETEQAIEELESMCKKTESCSVAQAGMQ
::::::::::::::::::
XP_016 QEIQETEQAIEELESMCKSLNKQDEKQLQELALEERQTIDQKINMLYNELFQSLVPKEKY
130 140 150 160 170 180
>>XP_005266656 (OMIM: 604601) PREDICTED: peptide chain r (445 aa)
initn: 968 init1: 968 opt: 968 Z-score: 975.3 bits: 188.1 E(85289): 1.4e-47
Smith-Waterman score: 968; 100.0% identity (100.0% similar) in 138 aa overlap (1-138:1-138)
10 20 30 40 50 60
pF1KE5 MNRHLCVWLFRHPSLNGYLQCHIQLHSHQFRQIHLDTRLQVFRQNRNCILHLLSKNWSRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MNRHLCVWLFRHPSLNGYLQCHIQLHSHQFRQIHLDTRLQVFRQNRNCILHLLSKNWSRR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 YCHQDTKMLWKHKALQKYMENLSKEYQTLEQCLQHIPVNEENRRSLNRRHAELAPLAAIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YCHQDTKMLWKHKALQKYMENLSKEYQTLEQCLQHIPVNEENRRSLNRRHAELAPLAAIY
70 80 90 100 110 120
130 140 150
pF1KE5 QEIQETEQAIEELESMCKKTESCSVAQAGMQ
::::::::::::::::::
XP_005 QEIQETEQAIEELESMCKSLNKQDEKQLQELALEERQTIDQKINMLYNELFQSLVPKEKY
130 140 150 160 170 180
151 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 22:18:55 2016 done: Mon Nov 7 22:18:56 2016
Total Scan time: 5.150 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]