FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3310, 819 aa 1>>>pF1KE3310 819 - 819 aa - 819 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 13.8129+/-0.00148; mu= -18.4988+/- 0.089 mean_var=457.5818+/-95.522, 0's: 0 Z-trim(111.1): 47 B-trim: 382 in 1/50 Lambda= 0.059957 statistics sampled from 12120 (12152) to 12120 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.679), E-opt: 0.2 (0.373), width: 16 Scan time: 4.340 The best scores are: opt bits E(32554) CCDS2146.1 IWS1 gene_id:55677|Hs108|chr2 ( 819) 5385 481.0 3.5e-135 >>CCDS2146.1 IWS1 gene_id:55677|Hs108|chr2 (819 aa) initn: 5385 init1: 5385 opt: 5385 Z-score: 2540.4 bits: 481.0 E(32554): 3.5e-135 Smith-Waterman score: 5385; 100.0% identity (100.0% similar) in 819 aa overlap (1-819:1-819) 10 20 30 40 50 60 pF1KE3 MDSEYYSGDQSDDGGATPVQDERDSGSDGEDDVNEQHSGSDTGSVERHSENETSDREDGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS21 MDSEYYSGDQSDDGGATPVQDERDSGSDGEDDVNEQHSGSDTGSVERHSENETSDREDGL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 PKGHHVTDSENDEPLNLNASDSESEELHRQKDSDSESEERAEPPASDSENEDVNQHGSDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS21 PKGHHVTDSENDEPLNLNASDSESEELHRQKDSDSESEERAEPPASDSENEDVNQHGSDS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 ESEETRKLPGSDSENEELLNGHASDSENEDVGKHPASDSEIEELQKSPASDSETEDALKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS21 ESEETRKLPGSDSENEELLNGHASDSENEDVGKHPASDSEIEELQKSPASDSETEDALKP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 QISDSESEEPPRHQASDSENEEPPKPRMSDSESEELPKPQVSDSESEEPPRHQASDSENE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS21 QISDSESEEPPRHQASDSENEEPPKPRMSDSESEELPKPQVSDSESEEPPRHQASDSENE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 ELPKPRISDSESEDPPRHQASDSENEELPKPRISDSESEDPPRNQASDSENEELPKPRVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS21 ELPKPRISDSESEDPPRHQASDSENEELPKPRISDSESEDPPRNQASDSENEELPKPRVS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 DSESEGPQKGPASDSETEDASRHKQKPESDDDSDRENKGEDTEMQNDSFHSDSHMDRKKF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS21 DSESEGPQKGPASDSETEDASRHKQKPESDDDSDRENKGEDTEMQNDSFHSDSHMDRKKF 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 HSSDSEEEEHKKQKMDSDEDEKEGEEEKVAKRKAAVLSDSEDEEKASAKKSRVVSDADDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS21 HSSDSEEEEHKKQKMDSDEDEKEGEEEKVAKRKAAVLSDSEDEEKASAKKSRVVSDADDS 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE3 DSDAVSDKSGKREKTIASDSEEEAGKELSDKKNEEKDLFGSDSESGNEEENLIADIFGES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS21 DSDAVSDKSGKREKTIASDSEEEAGKELSDKKNEEKDLFGSDSESGNEEENLIADIFGES 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE3 GDEEEEEFTGFNQEDLEEEKGETQVKEAEDSDSDDNIKRGKHMDFLSDFEMMLQRKKSMS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS21 GDEEEEEFTGFNQEDLEEEKGETQVKEAEDSDSDDNIKRGKHMDFLSDFEMMLQRKKSMS 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE3 GKRRRNRDGGTFISDADDVVSAMIVKMNEAAEEDRQLNNQKKPALKKLTLLPAVVMHLKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS21 GKRRRNRDGGTFISDADDVVSAMIVKMNEAAEEDRQLNNQKKPALKKLTLLPAVVMHLKK 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE3 QDLKETFIDSGVMSAIKEWLSPLPDRSLPALKIREELLKILQELPSVSQETLKHSGIGRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS21 QDLKETFIDSGVMSAIKEWLSPLPDRSLPALKIREELLKILQELPSVSQETLKHSGIGRA 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE3 VMYLYKHPKESRSNKDMAGKLINEWSRPIFGLTSNYKGMTREEREQRDLEQMPQRRRMNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS21 VMYLYKHPKESRSNKDMAGKLINEWSRPIFGLTSNYKGMTREEREQRDLEQMPQRRRMNS 670 680 690 700 710 720 730 740 750 760 770 780 pF1KE3 TGGQTPRRDLEKVLTGEEKALRPGDPGFCARARVPMPSNKDYVVRPKWNVEMESSRFQAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS21 TGGQTPRRDLEKVLTGEEKALRPGDPGFCARARVPMPSNKDYVVRPKWNVEMESSRFQAT 730 740 750 760 770 780 790 800 810 pF1KE3 SKKGISRLDKQMRKFTDIRKKSRSAHAVKISIEGNKMPL ::::::::::::::::::::::::::::::::::::::: CCDS21 SKKGISRLDKQMRKFTDIRKKSRSAHAVKISIEGNKMPL 790 800 810 819 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 19:23:35 2016 done: Mon Nov 7 19:23:36 2016 Total Scan time: 4.340 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]