Result of FASTA (ccds) for
pFN21AE4288
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE4288, 1683 aa
1>>>pF1KE4288 1683 - 1683 aa - 1683 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.8971+/-0.00111; mu= 16.6892+/- 0.067
mean_var=119.2694+/-25.155, 0's: 0 Z-trim(104.8): 86 B-trim: 503 in 1/51
Lambda= 0.117438
statistics sampled from 8014 (8096) to 8014 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.598), E-opt: 0.2 (0.249), width: 16
Scan time: 3.810
The best scores are: opt bits E(32554)
CCDS43513.2 SHPRH gene_id:257218|Hs108|chr6 (1683) 11280 1923.9 0
CCDS47496.1 SHPRH gene_id:257218|Hs108|chr6 (1659) 9785 1670.6 0
CCDS892.1 TTF2 gene_id:8458|Hs108|chr1 (1162) 352 72.3 1.1e-11
>>CCDS43513.2 SHPRH gene_id:257218|Hs108|chr6 (1683 aa)
initn: 11280 init1: 11280 opt: 11280 Z-score: 10327.3 bits: 1923.9 E(32554): 0
Smith-Waterman score: 11280; 100.0% identity (100.0% similar) in 1683 aa overlap (1-1683:1-1683)
10 20 30 40 50 60
pF1KE4 MSSRRKRAPPVRVDEEKRQQLHWNMHEDRRNEPIIISDDDEQPCPGSDTSSAHYIILSDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MSSRRKRAPPVRVDEEKRQQLHWNMHEDRRNEPIIISDDDEQPCPGSDTSSAHYIILSDS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 LKEEVAHRDKKRCSKVVSFSKPIEKEETVGIFSPLSVKLNIVISPYHFDNSWKAFLGELT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LKEEVAHRDKKRCSKVVSFSKPIEKEETVGIFSPLSVKLNIVISPYHFDNSWKAFLGELT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 LQLLPAQSLIENFSERSITLMSSESSNQFLIYVHSKGEDVEKQKKEPMSICDKGILVESS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LQLLPAQSLIENFSERSITLMSSESSNQFLIYVHSKGEDVEKQKKEPMSICDKGILVESS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 FSGEMLEDLGWLQKKRRIKLYQKPEGNHIIKVGIYLLEAGLAKLDFLSDANSRMKKFNQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 FSGEMLEDLGWLQKKRRIKLYQKPEGNHIIKVGIYLLEAGLAKLDFLSDANSRMKKFNQL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 MKKVMEKLHNSIIPDVLEEDEDDPESEPEGQDIDELYHFVKQTHQQETQSIQVDVQHPAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MKKVMEKLHNSIIPDVLEEDEDDPESEPEGQDIDELYHFVKQTHQQETQSIQVDVQHPAL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 IPVLRPYQREAVNWMLQQECFRSSPATESALHFLWREIVTSEGLKLYYNPYTGCIIREYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 IPVLRPYQREAVNWMLQQECFRSSPATESALHFLWREIVTSEGLKLYYNPYTGCIIREYP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE4 NSGPQLLGGILADEMGLGKTVEVLALILTHTRQDVKQDALTLPEGKVVNYFIPSHYFGGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 NSGPQLLGGILADEMGLGKTVEVLALILTHTRQDVKQDALTLPEGKVVNYFIPSHYFGGK
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE4 LKKTEIQNIEFEPKEKVQCPPTRVMILTAVKEMNGKKGVSILSIYKYVSSIYRYDVQRNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LKKTEIQNIEFEPKEKVQCPPTRVMILTAVKEMNGKKGVSILSIYKYVSSIYRYDVQRNR
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE4 SLLKRMLKCLIFEGLVKQIKGHGFSGTFTLGKNYKEEDICDKTKKQAVGSPRKIQKETRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 SLLKRMLKCLIFEGLVKQIKGHGFSGTFTLGKNYKEEDICDKTKKQAVGSPRKIQKETRK
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE4 SGNKDTDSEYLPSDTSDDDDDPYYYYYKSRRNRSKLRKKLVPSTKKGKSQPFINPDSQGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 SGNKDTDSEYLPSDTSDDDDDPYYYYYKSRRNRSKLRKKLVPSTKKGKSQPFINPDSQGH
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE4 CPATSDSGITDVAMSKSTCISEFNQEHETEDCAESLNHADSDVPPSNTMSPFNTSDYRFE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 CPATSDSGITDVAMSKSTCISEFNQEHETEDCAESLNHADSDVPPSNTMSPFNTSDYRFE
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE4 CICGELDQIDRKPRVQCLKCHLWQHAKCVNYDEKNLKIKPFYCPHCLVAMEPVSTRATLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 CICGELDQIDRKPRVQCLKCHLWQHAKCVNYDEKNLKIKPFYCPHCLVAMEPVSTRATLI
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE4 ISPSSICHQWVDEINRHVRSSSLRVLVYQGVKKDGFLQPHFLAEQDIVIITYDVLRSELN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 ISPSSICHQWVDEINRHVRSSSLRVLVYQGVKKDGFLQPHFLAEQDIVIITYDVLRSELN
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE4 YVDIPHSNSEDGRRLRNQKRYMAIPSPLVAVEWWRICLDEAQMVECPTVKAAEMAQRLSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 YVDIPHSNSEDGRRLRNQKRYMAIPSPLVAVEWWRICLDEAQMVECPTVKAAEMAQRLSG
790 800 810 820 830 840
850 860 870 880 890 900
pF1KE4 INRWCISGTPVQRGLEDLFGLVVFLGIEPYCVKHWWVRLLYRPYCKKNPQHLYSFIAKIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 INRWCISGTPVQRGLEDLFGLVVFLGIEPYCVKHWWVRLLYRPYCKKNPQHLYSFIAKIL
850 860 870 880 890 900
910 920 930 940 950 960
pF1KE4 WRSAKKDVIDQIQIPPQTEEIHWLHFSPVERHFYHRQHEVCCQDVVVKLRKISDWALKLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 WRSAKKDVIDQIQIPPQTEEIHWLHFSPVERHFYHRQHEVCCQDVVVKLRKISDWALKLS
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KE4 SLDRRTVTSILYPLLRLRQACCHPQAVRGEFLPLQKSTMTMEELLTSLQKKCGTECEEAH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 SLDRRTVTSILYPLLRLRQACCHPQAVRGEFLPLQKSTMTMEELLTSLQKKCGTECEEAH
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KE4 RQLVCALNGLAGIHIIKGEYALAAELYREVLRSSEEHKGKLKTDSLQRLHATHNLMELLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 RQLVCALNGLAGIHIIKGEYALAAELYREVLRSSEEHKGKLKTDSLQRLHATHNLMELLI
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KE4 ARHPGIPPTLRDGRLEEEAKQLREHYMSKCNTEVAEAQQALYPVQQTIHELQRKIHSNSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 ARHPGIPPTLRDGRLEEEAKQLREHYMSKCNTEVAEAQQALYPVQQTIHELQRKIHSNSP
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KE4 WWLNVIHRAIEFTIDEELVQRVRNEITSNYKQQTGKLSMSEKFRDCRGLQFLLTTQMEEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 WWLNVIHRAIEFTIDEELVQRVRNEITSNYKQQTGKLSMSEKFRDCRGLQFLLTTQMEEL
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KE4 NKCQKLVREAVKNLEGPPSRNVIESATVCHLRPARLPLNCCVFCKADELFTEYESKLFSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 NKCQKLVREAVKNLEGPPSRNVIESATVCHLRPARLPLNCCVFCKADELFTEYESKLFSN
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KE4 TVKGQTAIFEEMIEDEEGLVDDRAPTTTRGLWAISETERSMKAILSFAKSHRFDVEFVDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 TVKGQTAIFEEMIEDEEGLVDDRAPTTTRGLWAISETERSMKAILSFAKSHRFDVEFVDE
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360 1370 1380
pF1KE4 GSTSMDLFEAWKKEYKLLHEYWMALRNRVSAVDELAMATERLRVRDPREPKPNPPVLHII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 GSTSMDLFEAWKKEYKLLHEYWMALRNRVSAVDELAMATERLRVRDPREPKPNPPVLHII
1330 1340 1350 1360 1370 1380
1390 1400 1410 1420 1430 1440
pF1KE4 EPHEVEQNRIKLLNDKAVATSQLQKKLGQLLYLTNLEKSQDKTSGGVNPEPCPICARQLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 EPHEVEQNRIKLLNDKAVATSQLQKKLGQLLYLTNLEKSQDKTSGGVNPEPCPICARQLG
1390 1400 1410 1420 1430 1440
1450 1460 1470 1480 1490 1500
pF1KE4 KQWAVLTCGHCFCNECISIIIEQYSVGSHRSSIKCAICRQTTSHKEISYVFTSEKANQEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 KQWAVLTCGHCFCNECISIIIEQYSVGSHRSSIKCAICRQTTSHKEISYVFTSEKANQEE
1450 1460 1470 1480 1490 1500
1510 1520 1530 1540 1550 1560
pF1KE4 DIPVKGSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTDNNMEFAQISR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 DIPVKGSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTDNNMEFAQISR
1510 1520 1530 1540 1550 1560
1570 1580 1590 1600 1610 1620
pF1KE4 VKTFQENLSAFKRDPQINILLLPLHTGSNGLTIIEATHVLLVEPILNPAHELQAIGRVHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 VKTFQENLSAFKRDPQINILLLPLHTGSNGLTIIEATHVLLVEPILNPAHELQAIGRVHR
1570 1580 1590 1600 1610 1620
1630 1640 1650 1660 1670 1680
pF1KE4 IGQTKPTIVHRFLIKATIEERMQAMLKTAERSHTNSSAKHSEASVLTVADLADLFTKETE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 IGQTKPTIVHRFLIKATIEERMQAMLKTAERSHTNSSAKHSEASVLTVADLADLFTKETE
1630 1640 1650 1660 1670 1680
pF1KE4 ELE
:::
CCDS43 ELE
>>CCDS47496.1 SHPRH gene_id:257218|Hs108|chr6 (1659 aa)
initn: 9833 init1: 6788 opt: 9785 Z-score: 8958.5 bits: 1670.6 E(32554): 0
Smith-Waterman score: 11006; 99.2% identity (99.2% similar) in 1661 aa overlap (1-1652:1-1656)
10 20 30 40 50 60
pF1KE4 MSSRRKRAPPVRVDEEKRQQLHWNMHEDRRNEPIIISDDDEQPCPGSDTSSAHYIILSDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MSSRRKRAPPVRVDEEKRQQLHWNMHEDRRNEPIIISDDDEQPCPGSDTSSAHYIILSDS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 LKEEVAHRDKKRCSKVVSFSKPIEKEETVGIFSPLSVKLNIVISPYHFDNSWKAFLGELT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LKEEVAHRDKKRCSKVVSFSKPIEKEETVGIFSPLSVKLNIVISPYHFDNSWKAFLGELT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 LQLLPAQSLIENFSERSITLMSSESSNQFLIYVHSKGEDVEKQKKEPMSICDKGILVESS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LQLLPAQSLIENFSERSITLMSSESSNQFLIYVHSKGEDVEKQKKEPMSICDKGILVESS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 FSGEMLEDLGWLQKKRRIKLYQKPEGNHIIKVGIYLLEAGLAKLDFLSDANSRMKKFNQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 FSGEMLEDLGWLQKKRRIKLYQKPEGNHIIKVGIYLLEAGLAKLDFLSDANSRMKKFNQL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 MKKVMEKLHNSIIPDVLEEDEDDPESEPEGQDIDELYHFVKQTHQQETQSIQVDVQHPAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MKKVMEKLHNSIIPDVLEEDEDDPESEPEGQDIDELYHFVKQTHQQETQSIQVDVQHPAL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 IPVLRPYQREAVNWMLQQECFRSSPATESALHFLWREIVTSEGLKLYYNPYTGCIIREYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 IPVLRPYQREAVNWMLQQECFRSSPATESALHFLWREIVTSEGLKLYYNPYTGCIIREYP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE4 NSGPQLLGGILADEMGLGKTVEVLALILTHTRQDVKQDALTLPEGKVVNYFIPSHYFGGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 NSGPQLLGGILADEMGLGKTVEVLALILTHTRQDVKQDALTLPEGKVVNYFIPSHYFGGK
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE4 LKKTEIQNIEFEPKEKVQCPPTRVMILTAVKEMNGKKGVSILSIYKYVSSIYRYDVQRNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LKKTEIQNIEFEPKEKVQCPPTRVMILTAVKEMNGKKGVSILSIYKYVSSIYRYDVQRNR
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE4 SLLKRMLKCLIFEGLVKQIKGHGFSGTFTLGKNYKEEDICDKTKKQAVGSPRKIQKETRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 SLLKRMLKCLIFEGLVKQIKGHGFSGTFTLGKNYKEEDICDKTKKQAVGSPRKIQKETRK
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE4 SGNKDTDSEYLPSDTSDDDDDPYYYYYKSRRNRSKLRKKLVPSTKKGKSQPFINPDSQGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 SGNKDTDSEYLPSDTSDDDDDPYYYYYKSRRNRSKLRKKLVPSTKKGKSQPFINPDSQGH
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE4 CPATSDSGITDVAMSKSTCISEFNQEHETEDCAESLNHADSDVPPSNTMSPFNTSDYRFE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 CPATSDSGITDVAMSKSTCISEFNQEHETEDCAESLNHADSDVPPSNTMSPFNTSDYRFE
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE4 CICGELDQIDRKPRVQCLKCHLWQHAKCVNYDEKNLKIKPFYCPHCLVAMEPVSTRATLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 CICGELDQIDRKPRVQCLKCHLWQHAKCVNYDEKNLKIKPFYCPHCLVAMEPVSTRATLI
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE4 ISPSSICHQWVDEINRHVRSSSLRVLVYQGVKKDGFLQPHFLAEQDIVIITYDVLRSELN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 ISPSSICHQWVDEINRHVRSSSLRVLVYQGVKKDGFLQPHFLAEQDIVIITYDVLRSELN
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE4 YVDIPHSNSEDGRRLRNQKRYMAIPSPLVAVEWWRICLDEAQMVECPTVKAAEMAQRLSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 YVDIPHSNSEDGRRLRNQKRYMAIPSPLVAVEWWRICLDEAQMVECPTVKAAEMAQRLSG
790 800 810 820 830 840
850 860 870 880 890 900
pF1KE4 INRWCISGTPVQRGLEDLFGLVVFLGIEPYCVKHWWVRLLYRPYCKKNPQHLYSFIAKIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 INRWCISGTPVQRGLEDLFGLVVFLGIEPYCVKHWWVRLLYRPYCKKNPQHLYSFIAKIL
850 860 870 880 890 900
910 920 930 940 950 960
pF1KE4 WRSAKKDVIDQIQIPPQTEEIHWLHFSPVERHFYHRQHEVCCQDVVVKLRKISDWALKLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 WRSAKKDVIDQIQIPPQTEEIHWLHFSPVERHFYHRQHEVCCQDVVVKLRKISDWALKLS
910 920 930 940 950 960
970 980 990 1000 1010
pF1KE4 SLDRRTVTSILYPLLRLRQACCHPQAVRGEFLPLQKS---------TMTMEELLTSLQKK
::::::::::::::::::::::::::::::::::::: ::::::::::::::
CCDS47 SLDRRTVTSILYPLLRLRQACCHPQAVRGEFLPLQKSFEQSTFSFSTMTMEELLTSLQKK
970 980 990 1000 1010 1020
1020 1030 1040 1050 1060 1070
pF1KE4 CGTECEEAHRQLVCALNGLAGIHIIKGEYALAAELYREVLRSSEEHKGKLKTDSLQRLHA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 CGTECEEAHRQLVCALNGLAGIHIIKGEYALAAELYREVLRSSEEHKGKLKTDSLQRLHA
1030 1040 1050 1060 1070 1080
1080 1090 1100 1110 1120 1130
pF1KE4 THNLMELLIARHPGIPPTLRDGRLEEEAKQLREHYMSKCNTEVAEAQQALYPVQQTIHEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 THNLMELLIARHPGIPPTLRDGRLEEEAKQLREHYMSKCNTEVAEAQQALYPVQQTIHEL
1090 1100 1110 1120 1130 1140
1140 1150 1160 1170 1180 1190
pF1KE4 QRKIHSNSPWWLNVIHRAIEFTIDEELVQRVRNEITSNYKQQTGKLSMSEKFRDCRGLQF
::::::::::::::::::::::::::::::::::::::::::::::::::: ::::
CCDS47 QRKIHSNSPWWLNVIHRAIEFTIDEELVQRVRNEITSNYKQQTGKLSMSEK-----GLQF
1150 1160 1170 1180 1190
1200 1210 1220 1230 1240 1250
pF1KE4 LLTTQMEELNKCQKLVREAVKNLEGPPSRNVIESATVCHLRPARLPLNCCVFCKADELFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LLTTQMEELNKCQKLVREAVKNLEGPPSRNVIESATVCHLRPARLPLNCCVFCKADELFT
1200 1210 1220 1230 1240 1250
1260 1270 1280 1290 1300 1310
pF1KE4 EYESKLFSNTVKGQTAIFEEMIEDEEGLVDDRAPTTTRGLWAISETERSMKAILSFAKSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 EYESKLFSNTVKGQTAIFEEMIEDEEGLVDDRAPTTTRGLWAISETERSMKAILSFAKSH
1260 1270 1280 1290 1300 1310
1320 1330 1340 1350 1360 1370
pF1KE4 RFDVEFVDEGSTSMDLFEAWKKEYKLLHEYWMALRNRVSAVDELAMATERLRVRDPREPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 RFDVEFVDEGSTSMDLFEAWKKEYKLLHEYWMALRNRVSAVDELAMATERLRVRDPREPK
1320 1330 1340 1350 1360 1370
1380 1390 1400 1410 1420 1430
pF1KE4 PNPPVLHIIEPHEVEQNRIKLLNDKAVATSQLQKKLGQLLYLTNLEKSQDKTSGGVNPEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 PNPPVLHIIEPHEVEQNRIKLLNDKAVATSQLQKKLGQLLYLTNLEKSQDKTSGGVNPEP
1380 1390 1400 1410 1420 1430
1440 1450 1460 1470 1480 1490
pF1KE4 CPICARQLGKQWAVLTCGHCFCNECISIIIEQYSVGSHRSSIKCAICRQTTSHKEISYVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 CPICARQLGKQWAVLTCGHCFCNECISIIIEQYSVGSHRSSIKCAICRQTTSHKEISYVF
1440 1450 1460 1470 1480 1490
1500 1510 1520 1530 1540 1550
pF1KE4 TSEKANQEEDIPVKGSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 TSEKANQEEDIPVKGSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTDN
1500 1510 1520 1530 1540 1550
1560 1570 1580 1590 1600 1610
pF1KE4 NMEFAQISRVKTFQENLSAFKRDPQINILLLPLHTGSNGLTIIEATHVLLVEPILNPAHE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 NMEFAQISRVKTFQENLSAFKRDPQINILLLPLHTGSNGLTIIEATHVLLVEPILNPAHE
1560 1570 1580 1590 1600 1610
1620 1630 1640 1650 1660 1670
pF1KE4 LQAIGRVHRIGQTKPTIVHRFLIKATIEERMQAMLKTAERSHTNSSAKHSEASVLTVADL
:::::::::::::::::::::::::::::::::::::::::
CCDS47 LQAIGRVHRIGQTKPTIVHRFLIKATIEERMQAMLKTAERSIYI
1620 1630 1640 1650
1680
pF1KE4 ADLFTKETEELE
>>CCDS892.1 TTF2 gene_id:8458|Hs108|chr1 (1162 aa)
initn: 569 init1: 186 opt: 352 Z-score: 323.3 bits: 72.3 E(32554): 1.1e-11
Smith-Waterman score: 400; 26.2% identity (58.0% similar) in 424 aa overlap (714-1100:640-1048)
690 700 710 720 730 740
pF1KE4 QHAKCVNYDEKNLKIKPFYCPHCLVAMEPVSTRATLIISPSSICHQWVDEINRHVRSSSL
....:::: :.:. :.: .:....: :..:
CCDS89 ILTQKNQEKKEEKEKSTALTWLSKDDSCDFTSHGTLIICPASLIHHWKNEVEKRVNSNKL
610 620 630 640 650 660
750 760 770 780 790 800
pF1KE4 RVLVYQGVKKDGFLQPHFLAEQDIVIITYDVLRSELNYVDIPHSNSEDGRRLRNQKRYMA
:: .:.: ..:. . . :. :::: ::... .: :: .:..... . .
CCDS89 RVYLYHGPNRDS--RARVLSTYDIVITTYSLVAKE-----IP-TNKQEAEIPGANLNVEG
670 680 690 700 710 720
810 820 830 840 850 860
pF1KE4 IPSPLVAVEWWRICLDEAQMVECPTVKAAEMAQRLSGINRWCISGTPVQRGLEDLFGLVV
.::. . : :: ::::. :. : :... . .:.. :: ..:::.: .: :...:.
CCDS89 TSTPLLRIAWARIILDEAHNVKNPRVQTSIAVCKLQACARWAVTGTPIQNNLLDMYSLLK
730 740 750 760 770 780
870 880 890 900 910
pF1KE4 FLGIEPYCVKHWWVRLLYRPYCKKNPQHLYSFIAKILWRSAKKDVIDQIQIP----PQTE
:: :. . : : ::. ..: :...: : :: .:. : :: .
CCDS89 FLRCSPFDEFNLW-RSQVDNGSKKGGERL-SILTKSLLLRRTKDQLDSTGRPLVILPQRK
790 800 810 820 830
920 930 940 950 960
pF1KE4 -EIHWLHFSPVERHFYH--------------RQHEV-CCQDVVVKLRKISDWALKLSSLD
..: :..: :. :. ..:: :. .: ::...: .
CCDS89 FQLHHLKLSEDEETVYNVFFARSRSALQSYLKRHESRGNQSGRSPNNPFSRVALEFGSEE
840 850 860 870 880 890
970 980 990 1000
pF1KE4 ----------RRTVTSILYPLLRLRQACCHPQAVRGEFLPLQKS----TMTMEELLTSLQ
: ... :: :::::: ::: . ... . :.. . ....:: :..:
CCDS89 PRHSEAADSPRSSTVHILSQLLRLRQCCCHLSLLKSALDPMELKGEGLVLSLEEQLSALT
900 910 920 930 940 950
1010 1020 1030 1040 1050 1060
pF1KE4 KKCGTECEEAHRQLVCALNG-LAGIHIIKG--EYALAAELYREVLRSSEEHKGKLKTDSL
.: .... . . .::: . .....: : . . : : :.. ...... :. .
CCDS89 L---SELRDSEPSSTVSLNGTFFKMELFEGMRESTKISSLLAE-LEAIQRNSASQKSVIV
960 970 980 990 1000 1010
1070 1080 1090 1100 1110 1120
pF1KE4 QRLHATHNLMELLIARHPGIPPTLRDGRLEEEAKQLREHYMSKCNTEVAEAQQALYPVQQ
.. ... : . .: :. . :: .. . .
CCDS89 SQWTNMLKVVALHLKKH-GLTYATIDGSVNPKQRMDLVEAFNHSRGPQVMLISLLAGGVG
1020 1030 1040 1050 1060 1070
1130 1140 1150 1160 1170 1180
pF1KE4 TIHELQRKIHSNSPWWLNVIHRAIEFTIDEELVQRVRNEITSNYKQQTGKLSMSEKFRDC
CCDS89 LNLTGGNHLFLLDMHWNPSLEDQACDRIYRVGQQKDVVIHRFVCEGTVEEKILQLQEKKK
1080 1090 1100 1110 1120 1130
1683 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 19:22:50 2016 done: Mon Nov 7 19:22:51 2016
Total Scan time: 3.810 Total Display time: 0.190
Function used was FASTA [36.3.4 Apr, 2011]