Result of FASTA (omim) for
pFN21AE3070
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3070, 227 aa
1>>>pF1KE3070 227 - 227 aa - 227 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.6223+/-0.000386; mu= 11.3543+/- 0.024
mean_var=63.0295+/-12.433, 0's: 0 Z-trim(111.8): 54 B-trim: 414 in 1/52
Lambda= 0.161548
statistics sampled from 20502 (20556) to 20502 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.631), E-opt: 0.2 (0.241), width: 16
Scan time: 4.620
The best scores are: opt bits E(85289)
NP_001035109 (OMIM: 608618) protein FAM3C precurso ( 227) 1511 360.9 9.7e-100
XP_011514038 (OMIM: 608618) PREDICTED: protein FAM ( 227) 1511 360.9 9.7e-100
NP_055703 (OMIM: 608618) protein FAM3C precursor [ ( 227) 1511 360.9 9.7e-100
XP_011514039 (OMIM: 608618) PREDICTED: protein FAM ( 227) 1511 360.9 9.7e-100
NP_068578 (OMIM: 300492) protein FAM3A isoform 1 p ( 230) 834 203.2 3.1e-52
NP_001164603 (OMIM: 300492) protein FAM3A isoform ( 230) 834 203.2 3.1e-52
NP_001269241 (OMIM: 300492) protein FAM3A isoform ( 230) 834 203.2 3.1e-52
NP_001164604 (OMIM: 300492) protein FAM3A isoform ( 192) 804 196.1 3.3e-50
XP_016885191 (OMIM: 300492) PREDICTED: protein FAM ( 189) 803 195.9 3.9e-50
XP_016885190 (OMIM: 300492) PREDICTED: protein FAM ( 189) 803 195.9 3.9e-50
XP_016885189 (OMIM: 300492) PREDICTED: protein FAM ( 189) 803 195.9 3.9e-50
XP_005274773 (OMIM: 300492) PREDICTED: protein FAM ( 244) 804 196.2 4.2e-50
NP_001269240 (OMIM: 300492) protein FAM3A isoform ( 244) 804 196.2 4.2e-50
XP_005264921 (OMIM: 608619) PREDICTED: protein FAM ( 223) 798 194.8 1e-49
XP_005264920 (OMIM: 608619) PREDICTED: protein FAM ( 223) 798 194.8 1e-49
XP_006713028 (OMIM: 608619) PREDICTED: protein FAM ( 224) 794 193.8 1.9e-49
NP_620160 (OMIM: 608619) protein FAM3D precursor [ ( 224) 794 193.8 1.9e-49
XP_005264919 (OMIM: 608619) PREDICTED: protein FAM ( 224) 794 193.8 1.9e-49
XP_011531653 (OMIM: 608619) PREDICTED: protein FAM ( 224) 794 193.8 1.9e-49
XP_011531652 (OMIM: 608619) PREDICTED: protein FAM ( 229) 790 192.9 3.8e-49
XP_011531650 (OMIM: 608619) PREDICTED: protein FAM ( 230) 788 192.4 5.2e-49
XP_011531651 (OMIM: 608619) PREDICTED: protein FAM ( 230) 788 192.4 5.2e-49
XP_005274771 (OMIM: 300492) PREDICTED: protein FAM ( 251) 782 191.1 1.5e-48
XP_006724895 (OMIM: 300492) PREDICTED: protein FAM ( 238) 778 190.1 2.7e-48
XP_006724894 (OMIM: 300492) PREDICTED: protein FAM ( 252) 778 190.1 2.9e-48
XP_011531654 (OMIM: 608619) PREDICTED: protein FAM ( 188) 774 189.2 4.2e-48
XP_011531655 (OMIM: 608619) PREDICTED: protein FAM ( 188) 774 189.2 4.2e-48
XP_006724897 (OMIM: 300492) PREDICTED: protein FAM ( 197) 774 189.2 4.4e-48
XP_016885188 (OMIM: 300492) PREDICTED: protein FAM ( 197) 774 189.2 4.4e-48
XP_011529487 (OMIM: 300492) PREDICTED: protein FAM ( 197) 774 189.2 4.4e-48
XP_011531656 (OMIM: 608619) PREDICTED: protein FAM ( 187) 771 188.5 6.7e-48
XP_006713030 (OMIM: 608619) PREDICTED: protein FAM ( 187) 771 188.5 6.7e-48
NP_478066 (OMIM: 608617) protein FAM3B isoform a p ( 235) 501 125.6 7.3e-29
XP_011527951 (OMIM: 608617) PREDICTED: protein FAM ( 249) 501 125.6 7.7e-29
XP_011527950 (OMIM: 608617) PREDICTED: protein FAM ( 311) 497 124.7 1.8e-28
NP_996847 (OMIM: 608617) protein FAM3B isoform b [ ( 187) 491 123.2 3e-28
NP_001164605 (OMIM: 300492) protein FAM3A isoform ( 213) 440 111.3 1.3e-24
XP_005277936 (OMIM: 300492) PREDICTED: protein FAM ( 213) 440 111.3 1.3e-24
XP_006724896 (OMIM: 300492) PREDICTED: protein FAM ( 227) 440 111.3 1.3e-24
XP_011540062 (OMIM: 253280,606822,613151,613157,61 ( 638) 216 59.3 1.8e-08
NP_001277058 (OMIM: 253280,606822,613151,613157,61 ( 638) 216 59.3 1.8e-08
XP_016857179 (OMIM: 253280,606822,613151,613157,61 ( 660) 216 59.3 1.8e-08
NP_060209 (OMIM: 253280,606822,613151,613157,61712 ( 660) 216 59.3 1.8e-08
XP_006710818 (OMIM: 253280,606822,613151,613157,61 ( 718) 216 59.3 2e-08
XP_005271067 (OMIM: 253280,606822,613151,613157,61 ( 718) 216 59.3 2e-08
NP_001230695 (OMIM: 253280,606822,613151,613157,61 ( 748) 216 59.3 2.1e-08
XP_006710819 (OMIM: 253280,606822,613151,613157,61 ( 748) 216 59.3 2.1e-08
NP_001280233 (OMIM: 608366) cell migration-inducin (1361) 202 56.1 3.4e-07
NP_001280227 (OMIM: 608366) cell migration-inducin (1361) 202 56.1 3.4e-07
NP_061159 (OMIM: 608366) cell migration-inducing a (1361) 202 56.1 3.4e-07
>>NP_001035109 (OMIM: 608618) protein FAM3C precursor [H (227 aa)
initn: 1511 init1: 1511 opt: 1511 Z-score: 1911.6 bits: 360.9 E(85289): 9.7e-100
Smith-Waterman score: 1511; 100.0% identity (100.0% similar) in 227 aa overlap (1-227:1-227)
10 20 30 40 50 60
pF1KE3 MRVAGAAKLVVAVAVFLLTFYVISQVFEIKMDASLGNLFARSALDTAARSTKPPRYKCGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MRVAGAAKLVVAVAVFLLTFYVISQVFEIKMDASLGNLFARSALDTAARSTKPPRYKCGI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 SKACPEKHFAFKMASGAANVVGPKICLEDNVLMSGVKNNVGRGINVALANGKTGEVLDTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SKACPEKHFAFKMASGAANVVGPKICLEDNVLMSGVKNNVGRGINVALANGKTGEVLDTK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 YFDMWGGDVAPFIEFLKAIQDGTIVLMGTYDDGATKLNDEARRLIADLGSTSITNLGFRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YFDMWGGDVAPFIEFLKAIQDGTIVLMGTYDDGATKLNDEARRLIADLGSTSITNLGFRD
130 140 150 160 170 180
190 200 210 220
pF1KE3 NWVFCGGKGIKTKSPFEQHIKNNKDTNKYEGWPEVVEMEGCIPQKQD
:::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NWVFCGGKGIKTKSPFEQHIKNNKDTNKYEGWPEVVEMEGCIPQKQD
190 200 210 220
>>XP_011514038 (OMIM: 608618) PREDICTED: protein FAM3C i (227 aa)
initn: 1511 init1: 1511 opt: 1511 Z-score: 1911.6 bits: 360.9 E(85289): 9.7e-100
Smith-Waterman score: 1511; 100.0% identity (100.0% similar) in 227 aa overlap (1-227:1-227)
10 20 30 40 50 60
pF1KE3 MRVAGAAKLVVAVAVFLLTFYVISQVFEIKMDASLGNLFARSALDTAARSTKPPRYKCGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MRVAGAAKLVVAVAVFLLTFYVISQVFEIKMDASLGNLFARSALDTAARSTKPPRYKCGI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 SKACPEKHFAFKMASGAANVVGPKICLEDNVLMSGVKNNVGRGINVALANGKTGEVLDTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SKACPEKHFAFKMASGAANVVGPKICLEDNVLMSGVKNNVGRGINVALANGKTGEVLDTK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 YFDMWGGDVAPFIEFLKAIQDGTIVLMGTYDDGATKLNDEARRLIADLGSTSITNLGFRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YFDMWGGDVAPFIEFLKAIQDGTIVLMGTYDDGATKLNDEARRLIADLGSTSITNLGFRD
130 140 150 160 170 180
190 200 210 220
pF1KE3 NWVFCGGKGIKTKSPFEQHIKNNKDTNKYEGWPEVVEMEGCIPQKQD
:::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NWVFCGGKGIKTKSPFEQHIKNNKDTNKYEGWPEVVEMEGCIPQKQD
190 200 210 220
>>NP_055703 (OMIM: 608618) protein FAM3C precursor [Homo (227 aa)
initn: 1511 init1: 1511 opt: 1511 Z-score: 1911.6 bits: 360.9 E(85289): 9.7e-100
Smith-Waterman score: 1511; 100.0% identity (100.0% similar) in 227 aa overlap (1-227:1-227)
10 20 30 40 50 60
pF1KE3 MRVAGAAKLVVAVAVFLLTFYVISQVFEIKMDASLGNLFARSALDTAARSTKPPRYKCGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 MRVAGAAKLVVAVAVFLLTFYVISQVFEIKMDASLGNLFARSALDTAARSTKPPRYKCGI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 SKACPEKHFAFKMASGAANVVGPKICLEDNVLMSGVKNNVGRGINVALANGKTGEVLDTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 SKACPEKHFAFKMASGAANVVGPKICLEDNVLMSGVKNNVGRGINVALANGKTGEVLDTK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 YFDMWGGDVAPFIEFLKAIQDGTIVLMGTYDDGATKLNDEARRLIADLGSTSITNLGFRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 YFDMWGGDVAPFIEFLKAIQDGTIVLMGTYDDGATKLNDEARRLIADLGSTSITNLGFRD
130 140 150 160 170 180
190 200 210 220
pF1KE3 NWVFCGGKGIKTKSPFEQHIKNNKDTNKYEGWPEVVEMEGCIPQKQD
:::::::::::::::::::::::::::::::::::::::::::::::
NP_055 NWVFCGGKGIKTKSPFEQHIKNNKDTNKYEGWPEVVEMEGCIPQKQD
190 200 210 220
>>XP_011514039 (OMIM: 608618) PREDICTED: protein FAM3C i (227 aa)
initn: 1511 init1: 1511 opt: 1511 Z-score: 1911.6 bits: 360.9 E(85289): 9.7e-100
Smith-Waterman score: 1511; 100.0% identity (100.0% similar) in 227 aa overlap (1-227:1-227)
10 20 30 40 50 60
pF1KE3 MRVAGAAKLVVAVAVFLLTFYVISQVFEIKMDASLGNLFARSALDTAARSTKPPRYKCGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MRVAGAAKLVVAVAVFLLTFYVISQVFEIKMDASLGNLFARSALDTAARSTKPPRYKCGI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 SKACPEKHFAFKMASGAANVVGPKICLEDNVLMSGVKNNVGRGINVALANGKTGEVLDTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SKACPEKHFAFKMASGAANVVGPKICLEDNVLMSGVKNNVGRGINVALANGKTGEVLDTK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 YFDMWGGDVAPFIEFLKAIQDGTIVLMGTYDDGATKLNDEARRLIADLGSTSITNLGFRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YFDMWGGDVAPFIEFLKAIQDGTIVLMGTYDDGATKLNDEARRLIADLGSTSITNLGFRD
130 140 150 160 170 180
190 200 210 220
pF1KE3 NWVFCGGKGIKTKSPFEQHIKNNKDTNKYEGWPEVVEMEGCIPQKQD
:::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NWVFCGGKGIKTKSPFEQHIKNNKDTNKYEGWPEVVEMEGCIPQKQD
190 200 210 220
>>NP_068578 (OMIM: 300492) protein FAM3A isoform 1 precu (230 aa)
initn: 826 init1: 797 opt: 834 Z-score: 1058.8 bits: 203.2 E(85289): 3.1e-52
Smith-Waterman score: 834; 51.5% identity (82.7% similar) in 231 aa overlap (1-225:1-226)
10 20 30 40 50
pF1KE3 MRVAGAAKLVVAVAVFLLTFYVISQVFEIKMDASLGNLFAR-SALDTAARS--TKPPR--
::.:: ..:: :. .:. :.: .. .. :. : : . : :. .: : ::
NP_068 MRLAGPLRIVVLVVSVGVTWIVVSILL-----GGPGSGFPRIQQLFTSPESSVTAAPRAR
10 20 30 40 50
60 70 80 90 100 110
pF1KE3 -YKCGISKACPEKHFAFKMASGAANVVGPKICLEDNVLMSGVKNNVGRGINVALANGKTG
::::. . :::.:.::...::::::.::::::::..:::.::.:::::.:.::.:: .:
NP_068 KYKCGLPQPCPEEHLAFRVVSGAANVIGPKICLEDKMLMSSVKDNVGRGLNIALVNGVSG
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE3 EVLDTKYFDMWGGDVAPFIEFLKAIQDGTIVLMGTYDDGATKLNDEARRLIADLGSTSIT
:..... ::::.::: ...:.. ...::.:....::: :::.:.:.:.:...::: .
NP_068 ELIEARAFDMWAGDVNDLLKFIRPLHEGTLVFVASYDDPATKMNEETRKLFSELGSRNAK
120 130 140 150 160 170
180 190 200 210 220
pF1KE3 NLGFRDNWVFCGGKGIKTKSPFEQHIKNNKDTNKYEGWPEVVEMEGCIPQKQD
.:.:::.::: :.::...:::::::.::.: .::::::::..:::::::..
NP_068 ELAFRDSWVFVGAKGVQNKSPFEQHVKNSKHSNKYEGWPEALEMEGCIPRRSTAS
180 190 200 210 220 230
>>NP_001164603 (OMIM: 300492) protein FAM3A isoform 1 pr (230 aa)
initn: 826 init1: 797 opt: 834 Z-score: 1058.8 bits: 203.2 E(85289): 3.1e-52
Smith-Waterman score: 834; 51.5% identity (82.7% similar) in 231 aa overlap (1-225:1-226)
10 20 30 40 50
pF1KE3 MRVAGAAKLVVAVAVFLLTFYVISQVFEIKMDASLGNLFAR-SALDTAARS--TKPPR--
::.:: ..:: :. .:. :.: .. .. :. : : . : :. .: : ::
NP_001 MRLAGPLRIVVLVVSVGVTWIVVSILL-----GGPGSGFPRIQQLFTSPESSVTAAPRAR
10 20 30 40 50
60 70 80 90 100 110
pF1KE3 -YKCGISKACPEKHFAFKMASGAANVVGPKICLEDNVLMSGVKNNVGRGINVALANGKTG
::::. . :::.:.::...::::::.::::::::..:::.::.:::::.:.::.:: .:
NP_001 KYKCGLPQPCPEEHLAFRVVSGAANVIGPKICLEDKMLMSSVKDNVGRGLNIALVNGVSG
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE3 EVLDTKYFDMWGGDVAPFIEFLKAIQDGTIVLMGTYDDGATKLNDEARRLIADLGSTSIT
:..... ::::.::: ...:.. ...::.:....::: :::.:.:.:.:...::: .
NP_001 ELIEARAFDMWAGDVNDLLKFIRPLHEGTLVFVASYDDPATKMNEETRKLFSELGSRNAK
120 130 140 150 160 170
180 190 200 210 220
pF1KE3 NLGFRDNWVFCGGKGIKTKSPFEQHIKNNKDTNKYEGWPEVVEMEGCIPQKQD
.:.:::.::: :.::...:::::::.::.: .::::::::..:::::::..
NP_001 ELAFRDSWVFVGAKGVQNKSPFEQHVKNSKHSNKYEGWPEALEMEGCIPRRSTAS
180 190 200 210 220 230
>>NP_001269241 (OMIM: 300492) protein FAM3A isoform 1 pr (230 aa)
initn: 826 init1: 797 opt: 834 Z-score: 1058.8 bits: 203.2 E(85289): 3.1e-52
Smith-Waterman score: 834; 51.5% identity (82.7% similar) in 231 aa overlap (1-225:1-226)
10 20 30 40 50
pF1KE3 MRVAGAAKLVVAVAVFLLTFYVISQVFEIKMDASLGNLFAR-SALDTAARS--TKPPR--
::.:: ..:: :. .:. :.: .. .. :. : : . : :. .: : ::
NP_001 MRLAGPLRIVVLVVSVGVTWIVVSILL-----GGPGSGFPRIQQLFTSPESSVTAAPRAR
10 20 30 40 50
60 70 80 90 100 110
pF1KE3 -YKCGISKACPEKHFAFKMASGAANVVGPKICLEDNVLMSGVKNNVGRGINVALANGKTG
::::. . :::.:.::...::::::.::::::::..:::.::.:::::.:.::.:: .:
NP_001 KYKCGLPQPCPEEHLAFRVVSGAANVIGPKICLEDKMLMSSVKDNVGRGLNIALVNGVSG
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE3 EVLDTKYFDMWGGDVAPFIEFLKAIQDGTIVLMGTYDDGATKLNDEARRLIADLGSTSIT
:..... ::::.::: ...:.. ...::.:....::: :::.:.:.:.:...::: .
NP_001 ELIEARAFDMWAGDVNDLLKFIRPLHEGTLVFVASYDDPATKMNEETRKLFSELGSRNAK
120 130 140 150 160 170
180 190 200 210 220
pF1KE3 NLGFRDNWVFCGGKGIKTKSPFEQHIKNNKDTNKYEGWPEVVEMEGCIPQKQD
.:.:::.::: :.::...:::::::.::.: .::::::::..:::::::..
NP_001 ELAFRDSWVFVGAKGVQNKSPFEQHVKNSKHSNKYEGWPEALEMEGCIPRRSTAS
180 190 200 210 220 230
>>NP_001164604 (OMIM: 300492) protein FAM3A isoform 2 [H (192 aa)
initn: 797 init1: 797 opt: 804 Z-score: 1022.3 bits: 196.1 E(85289): 3.3e-50
Smith-Waterman score: 804; 56.5% identity (89.7% similar) in 184 aa overlap (42-225:8-188)
20 30 40 50 60 70
pF1KE3 AVAVFLLTFYVISQVFEIKMDASLGNLFARSALDTAARSTKPPRYKCGISKACPEKHFAF
:.. .: :. : ::::. . :::.:.::
NP_001 MRLAGPESSVTAAPRARK---YKCGLPQPCPEEHLAF
10 20 30
80 90 100 110 120 130
pF1KE3 KMASGAANVVGPKICLEDNVLMSGVKNNVGRGINVALANGKTGEVLDTKYFDMWGGDVAP
...::::::.::::::::..:::.::.:::::.:.::.:: .::..... ::::.:::
NP_001 RVVSGAANVIGPKICLEDKMLMSSVKDNVGRGLNIALVNGVSGELIEARAFDMWAGDVND
40 50 60 70 80 90
140 150 160 170 180 190
pF1KE3 FIEFLKAIQDGTIVLMGTYDDGATKLNDEARRLIADLGSTSITNLGFRDNWVFCGGKGIK
...:.. ...::.:....::: :::.:.:.:.:...::: . .:.:::.::: :.::..
NP_001 LLKFIRPLHEGTLVFVASYDDPATKMNEETRKLFSELGSRNAKELAFRDSWVFVGAKGVQ
100 110 120 130 140 150
200 210 220
pF1KE3 TKSPFEQHIKNNKDTNKYEGWPEVVEMEGCIPQKQD
.:::::::.::.: .::::::::..:::::::..
NP_001 NKSPFEQHVKNSKHSNKYEGWPEALEMEGCIPRRSTAS
160 170 180 190
>>XP_016885191 (OMIM: 300492) PREDICTED: protein FAM3A i (189 aa)
initn: 797 init1: 797 opt: 803 Z-score: 1021.1 bits: 195.9 E(85289): 3.9e-50
Smith-Waterman score: 803; 55.7% identity (88.1% similar) in 185 aa overlap (44-225:1-185)
20 30 40 50 60 70
pF1KE3 AVFLLTFYVISQVFEIKMDASLGNLFARSALDTAARSTKPPR---YKCGISKACPEKHFA
.:.. :: ::::. . :::.:.:
XP_016 MDNTCYPCPAPRARKYKCGLPQPCPEEHLA
10 20 30
80 90 100 110 120 130
pF1KE3 FKMASGAANVVGPKICLEDNVLMSGVKNNVGRGINVALANGKTGEVLDTKYFDMWGGDVA
:...::::::.::::::::..:::.::.:::::.:.::.:: .::..... ::::.:::
XP_016 FRVVSGAANVIGPKICLEDKMLMSSVKDNVGRGLNIALVNGVSGELIEARAFDMWAGDVN
40 50 60 70 80 90
140 150 160 170 180 190
pF1KE3 PFIEFLKAIQDGTIVLMGTYDDGATKLNDEARRLIADLGSTSITNLGFRDNWVFCGGKGI
...:.. ...::.:....::: :::.:.:.:.:...::: . .:.:::.::: :.::.
XP_016 DLLKFIRPLHEGTLVFVASYDDPATKMNEETRKLFSELGSRNAKELAFRDSWVFVGAKGV
100 110 120 130 140 150
200 210 220
pF1KE3 KTKSPFEQHIKNNKDTNKYEGWPEVVEMEGCIPQKQD
..:::::::.::.: .::::::::..:::::::..
XP_016 QNKSPFEQHVKNSKHSNKYEGWPEALEMEGCIPRRSTAS
160 170 180
>>XP_016885190 (OMIM: 300492) PREDICTED: protein FAM3A i (189 aa)
initn: 797 init1: 797 opt: 803 Z-score: 1021.1 bits: 195.9 E(85289): 3.9e-50
Smith-Waterman score: 803; 55.7% identity (88.1% similar) in 185 aa overlap (44-225:1-185)
20 30 40 50 60 70
pF1KE3 AVFLLTFYVISQVFEIKMDASLGNLFARSALDTAARSTKPPR---YKCGISKACPEKHFA
.:.. :: ::::. . :::.:.:
XP_016 MDNTCYPCPAPRARKYKCGLPQPCPEEHLA
10 20 30
80 90 100 110 120 130
pF1KE3 FKMASGAANVVGPKICLEDNVLMSGVKNNVGRGINVALANGKTGEVLDTKYFDMWGGDVA
:...::::::.::::::::..:::.::.:::::.:.::.:: .::..... ::::.:::
XP_016 FRVVSGAANVIGPKICLEDKMLMSSVKDNVGRGLNIALVNGVSGELIEARAFDMWAGDVN
40 50 60 70 80 90
140 150 160 170 180 190
pF1KE3 PFIEFLKAIQDGTIVLMGTYDDGATKLNDEARRLIADLGSTSITNLGFRDNWVFCGGKGI
...:.. ...::.:....::: :::.:.:.:.:...::: . .:.:::.::: :.::.
XP_016 DLLKFIRPLHEGTLVFVASYDDPATKMNEETRKLFSELGSRNAKELAFRDSWVFVGAKGV
100 110 120 130 140 150
200 210 220
pF1KE3 KTKSPFEQHIKNNKDTNKYEGWPEVVEMEGCIPQKQD
..:::::::.::.: .::::::::..:::::::..
XP_016 QNKSPFEQHVKNSKHSNKYEGWPEALEMEGCIPRRSTAS
160 170 180
227 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 19:15:53 2016 done: Mon Nov 7 19:15:53 2016
Total Scan time: 4.620 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]