FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3150, 358 aa 1>>>pF1KE3150 358 - 358 aa - 358 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.0265+/-0.000378; mu= 18.4211+/- 0.023 mean_var=65.4998+/-13.567, 0's: 0 Z-trim(113.2): 28 B-trim: 2022 in 2/52 Lambda= 0.158473 statistics sampled from 22419 (22443) to 22419 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.64), E-opt: 0.2 (0.263), width: 16 Scan time: 5.440 The best scores are: opt bits E(85289) NP_904356 (OMIM: 609098) F-box only protein 25 iso ( 358) 2497 579.6 3.5e-165 XP_011533050 (OMIM: 609098) PREDICTED: F-box only ( 367) 2284 530.9 1.7e-150 NP_904357 (OMIM: 609098) F-box only protein 25 iso ( 367) 2284 530.9 1.7e-150 XP_016868802 (OMIM: 609098) PREDICTED: F-box only ( 367) 2284 530.9 1.7e-150 NP_036305 (OMIM: 609098) F-box only protein 25 iso ( 291) 1815 423.7 2.6e-118 XP_011533051 (OMIM: 609098) PREDICTED: F-box only ( 300) 1602 375.0 1.2e-103 NP_478136 (OMIM: 606604) F-box only protein 32 iso ( 355) 1547 362.4 8.5e-100 XP_016868803 (OMIM: 609098) PREDICTED: F-box only ( 336) 1395 327.7 2.4e-89 NP_680482 (OMIM: 606604) F-box only protein 32 iso ( 210) 921 219.2 6.8e-57 NP_001229392 (OMIM: 606604) F-box only protein 32 ( 262) 618 150.0 5.8e-36 >>NP_904356 (OMIM: 609098) F-box only protein 25 isoform (358 aa) initn: 2497 init1: 2497 opt: 2497 Z-score: 3086.4 bits: 579.6 E(85289): 3.5e-165 Smith-Waterman score: 2497; 99.7% identity (100.0% similar) in 358 aa overlap (1-358:1-358) 10 20 30 40 50 60 pF1KE3 MPFLGQDWRSPGWSWIKTEDGWKRCESCSQKLERENNHCNISHSIILNSEDGEIFNNEEH :::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::: NP_904 MPFLGQDWRSPGWSWIKTEDGWKRCESCSQKLERENNRCNISHSIILNSEDGEIFNNEEH 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 EYASKKRKKDHFRNDTNTQSFYREKWIYVHKESTKERHGYCTLGEAFNRLDFSSAIQDIR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_904 EYASKKRKKDHFRNDTNTQSFYREKWIYVHKESTKERHGYCTLGEAFNRLDFSSAIQDIR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 RFNYVVKLLQLIAKSQLTSLSGVAQKNYFNILDKIVQKVLDDHHNPRLIKDLLQDLSSTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_904 RFNYVVKLLQLIAKSQLTSLSGVAQKNYFNILDKIVQKVLDDHHNPRLIKDLLQDLSSTL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 CILIRGVGKSVLVGNINIWICRLETILAWQQQLQDLQMTKQVNNGLTLSDLPLHMLNNIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_904 CILIRGVGKSVLVGNINIWICRLETILAWQQQLQDLQMTKQVNNGLTLSDLPLHMLNNIL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 YRFSDGWDIITLGQVTPTLYMLSEDRQLWKKLCQYHFAEKQFCRHLILSEKGHIEWKLMY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_904 YRFSDGWDIITLGQVTPTLYMLSEDRQLWKKLCQYHFAEKQFCRHLILSEKGHIEWKLMY 250 260 270 280 290 300 310 320 330 340 350 pF1KE3 FALQKHYPAKEQYGDTLHFCRHCSILFWKDSGHPCTAADPDSCFTPVSPQHFIDLFKF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_904 FALQKHYPAKEQYGDTLHFCRHCSILFWKDSGHPCTAADPDSCFTPVSPQHFIDLFKF 310 320 330 340 350 >>XP_011533050 (OMIM: 609098) PREDICTED: F-box only prot (367 aa) initn: 2284 init1: 2284 opt: 2284 Z-score: 2823.1 bits: 530.9 E(85289): 1.7e-150 Smith-Waterman score: 2469; 97.3% identity (97.5% similar) in 367 aa overlap (1-358:1-367) 10 20 30 40 50 60 pF1KE3 MPFLGQDWRSPGWSWIKTEDGWKRCESCSQKLERENNHCNISHSIILNSEDGEIFNNEEH :::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::: XP_011 MPFLGQDWRSPGWSWIKTEDGWKRCESCSQKLERENNRCNISHSIILNSEDGEIFNNEEH 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 EYASKKRKKDHFRNDTNTQSFYREKWIYVHKESTKERHGYCTLGEAFNRLDFSSAIQDIR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 EYASKKRKKDHFRNDTNTQSFYREKWIYVHKESTKERHGYCTLGEAFNRLDFSSAIQDIR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 RFNYVVKLLQLIAKSQLTSLSGVAQKNYFNILDKIVQKVLDDHHNPRLIKDLLQDLSSTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 RFNYVVKLLQLIAKSQLTSLSGVAQKNYFNILDKIVQKVLDDHHNPRLIKDLLQDLSSTL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 CILIRGVGKSVLVGNINIWICRLETILAWQQQLQDLQMTKQVNNGLTLSDLPLHMLNNIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 CILIRGVGKSVLVGNINIWICRLETILAWQQQLQDLQMTKQVNNGLTLSDLPLHMLNNIL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 YRFSDGWDIITLGQVTPTLYMLSEDRQLWKKLCQYHFAEKQFCRHLILSEKGHIEWKLMY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 YRFSDGWDIITLGQVTPTLYMLSEDRQLWKKLCQYHFAEKQFCRHLILSEKGHIEWKLMY 250 260 270 280 290 300 310 320 330 340 350 pF1KE3 FALQKHYPAKEQYGDTLHFCRHCSILFWKD---------SGHPCTAADPDSCFTPVSPQH :::::::::::::::::::::::::::::: ::::::::::::::::::::: XP_011 FALQKHYPAKEQYGDTLHFCRHCSILFWKDYHLALLFKDSGHPCTAADPDSCFTPVSPQH 310 320 330 340 350 360 pF1KE3 FIDLFKF ::::::: XP_011 FIDLFKF >>NP_904357 (OMIM: 609098) F-box only protein 25 isoform (367 aa) initn: 2284 init1: 2284 opt: 2284 Z-score: 2823.1 bits: 530.9 E(85289): 1.7e-150 Smith-Waterman score: 2469; 97.3% identity (97.5% similar) in 367 aa overlap (1-358:1-367) 10 20 30 40 50 60 pF1KE3 MPFLGQDWRSPGWSWIKTEDGWKRCESCSQKLERENNHCNISHSIILNSEDGEIFNNEEH :::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::: NP_904 MPFLGQDWRSPGWSWIKTEDGWKRCESCSQKLERENNRCNISHSIILNSEDGEIFNNEEH 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 EYASKKRKKDHFRNDTNTQSFYREKWIYVHKESTKERHGYCTLGEAFNRLDFSSAIQDIR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_904 EYASKKRKKDHFRNDTNTQSFYREKWIYVHKESTKERHGYCTLGEAFNRLDFSSAIQDIR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 RFNYVVKLLQLIAKSQLTSLSGVAQKNYFNILDKIVQKVLDDHHNPRLIKDLLQDLSSTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_904 RFNYVVKLLQLIAKSQLTSLSGVAQKNYFNILDKIVQKVLDDHHNPRLIKDLLQDLSSTL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 CILIRGVGKSVLVGNINIWICRLETILAWQQQLQDLQMTKQVNNGLTLSDLPLHMLNNIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_904 CILIRGVGKSVLVGNINIWICRLETILAWQQQLQDLQMTKQVNNGLTLSDLPLHMLNNIL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 YRFSDGWDIITLGQVTPTLYMLSEDRQLWKKLCQYHFAEKQFCRHLILSEKGHIEWKLMY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_904 YRFSDGWDIITLGQVTPTLYMLSEDRQLWKKLCQYHFAEKQFCRHLILSEKGHIEWKLMY 250 260 270 280 290 300 310 320 330 340 350 pF1KE3 FALQKHYPAKEQYGDTLHFCRHCSILFWKD---------SGHPCTAADPDSCFTPVSPQH :::::::::::::::::::::::::::::: ::::::::::::::::::::: NP_904 FALQKHYPAKEQYGDTLHFCRHCSILFWKDYHLALLFKDSGHPCTAADPDSCFTPVSPQH 310 320 330 340 350 360 pF1KE3 FIDLFKF ::::::: NP_904 FIDLFKF >>XP_016868802 (OMIM: 609098) PREDICTED: F-box only prot (367 aa) initn: 2284 init1: 2284 opt: 2284 Z-score: 2823.1 bits: 530.9 E(85289): 1.7e-150 Smith-Waterman score: 2469; 97.3% identity (97.5% similar) in 367 aa overlap (1-358:1-367) 10 20 30 40 50 60 pF1KE3 MPFLGQDWRSPGWSWIKTEDGWKRCESCSQKLERENNHCNISHSIILNSEDGEIFNNEEH :::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::: XP_016 MPFLGQDWRSPGWSWIKTEDGWKRCESCSQKLERENNRCNISHSIILNSEDGEIFNNEEH 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 EYASKKRKKDHFRNDTNTQSFYREKWIYVHKESTKERHGYCTLGEAFNRLDFSSAIQDIR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 EYASKKRKKDHFRNDTNTQSFYREKWIYVHKESTKERHGYCTLGEAFNRLDFSSAIQDIR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 RFNYVVKLLQLIAKSQLTSLSGVAQKNYFNILDKIVQKVLDDHHNPRLIKDLLQDLSSTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RFNYVVKLLQLIAKSQLTSLSGVAQKNYFNILDKIVQKVLDDHHNPRLIKDLLQDLSSTL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 CILIRGVGKSVLVGNINIWICRLETILAWQQQLQDLQMTKQVNNGLTLSDLPLHMLNNIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 CILIRGVGKSVLVGNINIWICRLETILAWQQQLQDLQMTKQVNNGLTLSDLPLHMLNNIL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 YRFSDGWDIITLGQVTPTLYMLSEDRQLWKKLCQYHFAEKQFCRHLILSEKGHIEWKLMY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 YRFSDGWDIITLGQVTPTLYMLSEDRQLWKKLCQYHFAEKQFCRHLILSEKGHIEWKLMY 250 260 270 280 290 300 310 320 330 340 350 pF1KE3 FALQKHYPAKEQYGDTLHFCRHCSILFWKD---------SGHPCTAADPDSCFTPVSPQH :::::::::::::::::::::::::::::: ::::::::::::::::::::: XP_016 FALQKHYPAKEQYGDTLHFCRHCSILFWKDYHLALLFKDSGHPCTAADPDSCFTPVSPQH 310 320 330 340 350 360 pF1KE3 FIDLFKF ::::::: XP_016 FIDLFKF >>NP_036305 (OMIM: 609098) F-box only protein 25 isoform (291 aa) initn: 1813 init1: 1813 opt: 1815 Z-score: 2245.0 bits: 423.7 E(85289): 2.6e-118 Smith-Waterman score: 1815; 94.0% identity (97.2% similar) in 283 aa overlap (78-358:9-291) 50 60 70 80 90 100 pF1KE3 NSEDGEIFNNEEHEYASKKRKKDHFRNDTNTQSFYREKWIYVHKESTK--ERHGYCTLGE .....:.: . : :. .::::::::: NP_036 MEKYSIMKSMNMHRKKGKRTILEMTQILKRHGYCTLGE 10 20 30 110 120 130 140 150 160 pF1KE3 AFNRLDFSSAIQDIRRFNYVVKLLQLIAKSQLTSLSGVAQKNYFNILDKIVQKVLDDHHN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 AFNRLDFSSAIQDIRRFNYVVKLLQLIAKSQLTSLSGVAQKNYFNILDKIVQKVLDDHHN 40 50 60 70 80 90 170 180 190 200 210 220 pF1KE3 PRLIKDLLQDLSSTLCILIRGVGKSVLVGNINIWICRLETILAWQQQLQDLQMTKQVNNG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 PRLIKDLLQDLSSTLCILIRGVGKSVLVGNINIWICRLETILAWQQQLQDLQMTKQVNNG 100 110 120 130 140 150 230 240 250 260 270 280 pF1KE3 LTLSDLPLHMLNNILYRFSDGWDIITLGQVTPTLYMLSEDRQLWKKLCQYHFAEKQFCRH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 LTLSDLPLHMLNNILYRFSDGWDIITLGQVTPTLYMLSEDRQLWKKLCQYHFAEKQFCRH 160 170 180 190 200 210 290 300 310 320 330 340 pF1KE3 LILSEKGHIEWKLMYFALQKHYPAKEQYGDTLHFCRHCSILFWKDSGHPCTAADPDSCFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 LILSEKGHIEWKLMYFALQKHYPAKEQYGDTLHFCRHCSILFWKDSGHPCTAADPDSCFT 220 230 240 250 260 270 350 pF1KE3 PVSPQHFIDLFKF ::::::::::::: NP_036 PVSPQHFIDLFKF 280 290 >>XP_011533051 (OMIM: 609098) PREDICTED: F-box only prot (300 aa) initn: 1600 init1: 1600 opt: 1602 Z-score: 1981.7 bits: 375.0 E(85289): 1.2e-103 Smith-Waterman score: 1787; 91.1% identity (94.2% similar) in 292 aa overlap (78-358:9-300) 50 60 70 80 90 100 pF1KE3 NSEDGEIFNNEEHEYASKKRKKDHFRNDTNTQSFYREKWIYVHKESTK--ERHGYCTLGE .....:.: . : :. .::::::::: XP_011 MEKYSIMKSMNMHRKKGKRTILEMTQILKRHGYCTLGE 10 20 30 110 120 130 140 150 160 pF1KE3 AFNRLDFSSAIQDIRRFNYVVKLLQLIAKSQLTSLSGVAQKNYFNILDKIVQKVLDDHHN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 AFNRLDFSSAIQDIRRFNYVVKLLQLIAKSQLTSLSGVAQKNYFNILDKIVQKVLDDHHN 40 50 60 70 80 90 170 180 190 200 210 220 pF1KE3 PRLIKDLLQDLSSTLCILIRGVGKSVLVGNINIWICRLETILAWQQQLQDLQMTKQVNNG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 PRLIKDLLQDLSSTLCILIRGVGKSVLVGNINIWICRLETILAWQQQLQDLQMTKQVNNG 100 110 120 130 140 150 230 240 250 260 270 280 pF1KE3 LTLSDLPLHMLNNILYRFSDGWDIITLGQVTPTLYMLSEDRQLWKKLCQYHFAEKQFCRH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LTLSDLPLHMLNNILYRFSDGWDIITLGQVTPTLYMLSEDRQLWKKLCQYHFAEKQFCRH 160 170 180 190 200 210 290 300 310 320 330 pF1KE3 LILSEKGHIEWKLMYFALQKHYPAKEQYGDTLHFCRHCSILFWKD---------SGHPCT ::::::::::::::::::::::::::::::::::::::::::::: :::::: XP_011 LILSEKGHIEWKLMYFALQKHYPAKEQYGDTLHFCRHCSILFWKDYHLALLFKDSGHPCT 220 230 240 250 260 270 340 350 pF1KE3 AADPDSCFTPVSPQHFIDLFKF :::::::::::::::::::::: XP_011 AADPDSCFTPVSPQHFIDLFKF 280 290 300 >>NP_478136 (OMIM: 606604) F-box only protein 32 isoform (355 aa) initn: 1545 init1: 1388 opt: 1547 Z-score: 1912.7 bits: 362.4 E(85289): 8.5e-100 Smith-Waterman score: 1547; 61.4% identity (84.2% similar) in 360 aa overlap (1-358:1-355) 10 20 30 40 50 pF1KE3 MPFLGQDWRSPGWSWIKTEDGWKRC--ESCSQKLERENNHCNISHSIILNSEDGEIFNNE :::::::::::: .:.:: ::::: :. .. . ...:: . . :.:. .::. NP_478 MPFLGQDWRSPGQNWVKTADGWKRFLDEKSGSFVSDLSSYCN---KEVYNKEN--LFNSL 10 20 30 40 50 60 70 80 90 100 110 pF1KE3 EHEYASKKRKKDHFRNDTNTQSFYREKWIYVHKESTKERHGYCTLGEAFNRLDFSSAIQD ... :.:::::: . . :.:: :..:::::::: :::::::::::::::::::::.:: : NP_478 NYDVAAKKRKKDMLNSKTKTQYFHQEKWIYVHKGSTKERHGYCTLGEAFNRLDFSTAILD 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE3 IRRFNYVVKLLQLIAKSQLTSLSGVAQKNYFNILDKIVQKVLDDHHNPRLIKDLLQDLSS :::::::.::.::::::::::::.::::..:::.:.: :::.:..: :::..::: : . NP_478 SRRFNYVVRLLELIAKSQLTSLSGIAQKNFMNILEKVVLKVLEDQQNIRLIRELLQTLYT 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE3 TLCILIRGVGKSVLVGNINIWICRLETILAWQQQLQDLQMTKQVNNGLTLSDLPLHMLNN .:: :.. :::::::::::.:. :.:::: :::::...:.:. . .:::..:::: . : NP_478 SLCTLVQRVGKSVLVGNINMWVYRMETILHWQQQLNNIQITRPAFKGLTFTDLPLCLQLN 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE3 ILYRFSDGWDIITLGQVTPTLYMLSEDRQLWKKLCQYHFAEKQFCRHLILSEKGHIEWKL :. :.::: :...:::..: :..::::: ::::::::::.:.:. ..::::.::...:: NP_478 IMQRLSDGRDLVSLGQAAPDLHVLSEDRLLWKKLCQYHFSERQIRKRLILSDKGQLDWKK 240 250 260 270 280 290 300 310 320 330 340 350 pF1KE3 MYFALQKHYPAKEQYGDTLHFCRHCSILFWKDSGHPCTAADPDSCFTPVSPQHFIDLFKF ::: : . :: ::::::::..:.:: :: :: . ::::: .:.:: . .::: ::.:::: NP_478 MYFKLVRCYPRKEQYGDTLQLCKHCHILSWKGTDHPCTANNPESCSVSLSPQDFINLFKF 300 310 320 330 340 350 >>XP_016868803 (OMIM: 609098) PREDICTED: F-box only prot (336 aa) initn: 1389 init1: 1389 opt: 1395 Z-score: 1725.2 bits: 327.7 E(85289): 2.4e-89 Smith-Waterman score: 2186; 88.8% identity (89.1% similar) in 367 aa overlap (1-358:1-336) 10 20 30 40 50 60 pF1KE3 MPFLGQDWRSPGWSWIKTEDGWKRCESCSQKLERENNHCNISHSIILNSEDGEIFNNEEH :::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::: XP_016 MPFLGQDWRSPGWSWIKTEDGWKRCESCSQKLERENNRCNISHSIILNSEDGEIFNNEEH 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 EYASKKRKKDHFRNDTNTQSFYREKWIYVHKESTKERHGYCTLGEAFNRLDFSSAIQDIR :::::::::::::::::::::::::::::::::::: XP_016 EYASKKRKKDHFRNDTNTQSFYREKWIYVHKESTKE------------------------ 70 80 90 130 140 150 160 170 180 pF1KE3 RFNYVVKLLQLIAKSQLTSLSGVAQKNYFNILDKIVQKVLDDHHNPRLIKDLLQDLSSTL ::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 -------LLQLIAKSQLTSLSGVAQKNYFNILDKIVQKVLDDHHNPRLIKDLLQDLSSTL 100 110 120 130 140 190 200 210 220 230 240 pF1KE3 CILIRGVGKSVLVGNINIWICRLETILAWQQQLQDLQMTKQVNNGLTLSDLPLHMLNNIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 CILIRGVGKSVLVGNINIWICRLETILAWQQQLQDLQMTKQVNNGLTLSDLPLHMLNNIL 150 160 170 180 190 200 250 260 270 280 290 300 pF1KE3 YRFSDGWDIITLGQVTPTLYMLSEDRQLWKKLCQYHFAEKQFCRHLILSEKGHIEWKLMY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 YRFSDGWDIITLGQVTPTLYMLSEDRQLWKKLCQYHFAEKQFCRHLILSEKGHIEWKLMY 210 220 230 240 250 260 310 320 330 340 350 pF1KE3 FALQKHYPAKEQYGDTLHFCRHCSILFWKD---------SGHPCTAADPDSCFTPVSPQH :::::::::::::::::::::::::::::: ::::::::::::::::::::: XP_016 FALQKHYPAKEQYGDTLHFCRHCSILFWKDYHLALLFKDSGHPCTAADPDSCFTPVSPQH 270 280 290 300 310 320 pF1KE3 FIDLFKF ::::::: XP_016 FIDLFKF 330 >>NP_680482 (OMIM: 606604) F-box only protein 32 isoform (210 aa) initn: 921 init1: 921 opt: 921 Z-score: 1142.4 bits: 219.2 E(85289): 6.8e-57 Smith-Waterman score: 921; 60.3% identity (85.2% similar) in 209 aa overlap (150-358:2-210) 120 130 140 150 160 170 pF1KE3 RRFNYVVKLLQLIAKSQLTSLSGVAQKNYFNILDKIVQKVLDDHHNPRLIKDLLQDLSST :::.:.: :::.:..: :::..::: : .. NP_680 MNILEKVVLKVLEDQQNIRLIRELLQTLYTS 10 20 30 180 190 200 210 220 230 pF1KE3 LCILIRGVGKSVLVGNINIWICRLETILAWQQQLQDLQMTKQVNNGLTLSDLPLHMLNNI :: :.. :::::::::::.:. :.:::: :::::...:.:. . .:::..:::: . :: NP_680 LCTLVQRVGKSVLVGNINMWVYRMETILHWQQQLNNIQITRPAFKGLTFTDLPLCLQLNI 40 50 60 70 80 90 240 250 260 270 280 290 pF1KE3 LYRFSDGWDIITLGQVTPTLYMLSEDRQLWKKLCQYHFAEKQFCRHLILSEKGHIEWKLM . :.::: :...:::..: :..::::: ::::::::::.:.:. ..::::.::...:: : NP_680 MQRLSDGRDLVSLGQAAPDLHVLSEDRLLWKKLCQYHFSERQIRKRLILSDKGQLDWKKM 100 110 120 130 140 150 300 310 320 330 340 350 pF1KE3 YFALQKHYPAKEQYGDTLHFCRHCSILFWKDSGHPCTAADPDSCFTPVSPQHFIDLFKF :: : . :: ::::::::..:.:: :: :: . ::::: .:.:: . .::: ::.:::: NP_680 YFKLVRCYPRKEQYGDTLQLCKHCHILSWKGTDHPCTANNPESCSVSLSPQDFINLFKF 160 170 180 190 200 210 >>NP_001229392 (OMIM: 606604) F-box only protein 32 isof (262 aa) initn: 1115 init1: 618 opt: 618 Z-score: 766.7 bits: 150.0 E(85289): 5.8e-36 Smith-Waterman score: 936; 44.4% identity (60.8% similar) in 360 aa overlap (1-358:1-262) 10 20 30 40 50 pF1KE3 MPFLGQDWRSPGWSWIKTEDGWKRC--ESCSQKLERENNHCNISHSIILNSEDGEIFNNE :::::::::::: .:.:: ::::: :. .. . ...:: . . :.:. .::. NP_001 MPFLGQDWRSPGQNWVKTADGWKRFLDEKSGSFVSDLSSYCN---KEVYNKEN--LFNSL 10 20 30 40 50 60 70 80 90 100 110 pF1KE3 EHEYASKKRKKDHFRNDTNTQSFYREKWIYVHKESTKERHGYCTLGEAFNRLDFSSAIQD ... :.:::::: . . :.:: :..:::::::: :::::::::::::::::::::.:: : NP_001 NYDVAAKKRKKDMLNSKTKTQYFHQEKWIYVHKGSTKERHGYCTLGEAFNRLDFSTAILD 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE3 IRRFNYVVKLLQLIAKSQLTSLSGVAQKNYFNILDKIVQKVLDDHHNPRLIKDLLQDLSS :::::::. : . NP_001 SRRFNYVVR--------------------------------------PAF---------- 120 180 190 200 210 220 230 pF1KE3 TLCILIRGVGKSVLVGNINIWICRLETILAWQQQLQDLQMTKQVNNGLTLSDLPLHMLNN .:::..:::: . : NP_001 ---------------------------------------------KGLTFTDLPLCLQLN 130 140 240 250 260 270 280 290 pF1KE3 ILYRFSDGWDIITLGQVTPTLYMLSEDRQLWKKLCQYHFAEKQFCRHLILSEKGHIEWKL :. :.::: :...:::..: :..::::: ::::::::::.:.:. ..::::.::...:: NP_001 IMQRLSDGRDLVSLGQAAPDLHVLSEDRLLWKKLCQYHFSERQIRKRLILSDKGQLDWKK 150 160 170 180 190 200 300 310 320 330 340 350 pF1KE3 MYFALQKHYPAKEQYGDTLHFCRHCSILFWKDSGHPCTAADPDSCFTPVSPQHFIDLFKF ::: : . :: ::::::::..:.:: :: :: . ::::: .:.:: . .::: ::.:::: NP_001 MYFKLVRCYPRKEQYGDTLQLCKHCHILSWKGTDHPCTANNPESCSVSLSPQDFINLFKF 210 220 230 240 250 260 358 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 19:07:01 2016 done: Mon Nov 7 19:07:02 2016 Total Scan time: 5.440 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]