FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3150, 358 aa 1>>>pF1KE3150 358 - 358 aa - 358 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.4299+/-0.000845; mu= 16.0751+/- 0.051 mean_var=66.6765+/-13.314, 0's: 0 Z-trim(106.2): 15 B-trim: 0 in 0/51 Lambda= 0.157068 statistics sampled from 8860 (8869) to 8860 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.649), E-opt: 0.2 (0.272), width: 16 Scan time: 1.960 The best scores are: opt bits E(32554) CCDS5952.1 FBXO25 gene_id:26260|Hs108|chr8 ( 358) 2497 574.6 4.4e-164 CCDS5953.1 FBXO25 gene_id:26260|Hs108|chr8 ( 367) 2284 526.4 1.5e-149 CCDS5954.1 FBXO25 gene_id:26260|Hs108|chr8 ( 291) 1815 420.0 1.2e-117 CCDS6345.1 FBXO32 gene_id:114907|Hs108|chr8 ( 355) 1547 359.3 2.8e-99 CCDS56553.1 FBXO32 gene_id:114907|Hs108|chr8 ( 262) 618 148.8 5e-36 >>CCDS5952.1 FBXO25 gene_id:26260|Hs108|chr8 (358 aa) initn: 2497 init1: 2497 opt: 2497 Z-score: 3059.3 bits: 574.6 E(32554): 4.4e-164 Smith-Waterman score: 2497; 99.7% identity (100.0% similar) in 358 aa overlap (1-358:1-358) 10 20 30 40 50 60 pF1KE3 MPFLGQDWRSPGWSWIKTEDGWKRCESCSQKLERENNHCNISHSIILNSEDGEIFNNEEH :::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::: CCDS59 MPFLGQDWRSPGWSWIKTEDGWKRCESCSQKLERENNRCNISHSIILNSEDGEIFNNEEH 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 EYASKKRKKDHFRNDTNTQSFYREKWIYVHKESTKERHGYCTLGEAFNRLDFSSAIQDIR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 EYASKKRKKDHFRNDTNTQSFYREKWIYVHKESTKERHGYCTLGEAFNRLDFSSAIQDIR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 RFNYVVKLLQLIAKSQLTSLSGVAQKNYFNILDKIVQKVLDDHHNPRLIKDLLQDLSSTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 RFNYVVKLLQLIAKSQLTSLSGVAQKNYFNILDKIVQKVLDDHHNPRLIKDLLQDLSSTL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 CILIRGVGKSVLVGNINIWICRLETILAWQQQLQDLQMTKQVNNGLTLSDLPLHMLNNIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 CILIRGVGKSVLVGNINIWICRLETILAWQQQLQDLQMTKQVNNGLTLSDLPLHMLNNIL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 YRFSDGWDIITLGQVTPTLYMLSEDRQLWKKLCQYHFAEKQFCRHLILSEKGHIEWKLMY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 YRFSDGWDIITLGQVTPTLYMLSEDRQLWKKLCQYHFAEKQFCRHLILSEKGHIEWKLMY 250 260 270 280 290 300 310 320 330 340 350 pF1KE3 FALQKHYPAKEQYGDTLHFCRHCSILFWKDSGHPCTAADPDSCFTPVSPQHFIDLFKF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 FALQKHYPAKEQYGDTLHFCRHCSILFWKDSGHPCTAADPDSCFTPVSPQHFIDLFKF 310 320 330 340 350 >>CCDS5953.1 FBXO25 gene_id:26260|Hs108|chr8 (367 aa) initn: 2284 init1: 2284 opt: 2284 Z-score: 2798.3 bits: 526.4 E(32554): 1.5e-149 Smith-Waterman score: 2469; 97.3% identity (97.5% similar) in 367 aa overlap (1-358:1-367) 10 20 30 40 50 60 pF1KE3 MPFLGQDWRSPGWSWIKTEDGWKRCESCSQKLERENNHCNISHSIILNSEDGEIFNNEEH :::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::: CCDS59 MPFLGQDWRSPGWSWIKTEDGWKRCESCSQKLERENNRCNISHSIILNSEDGEIFNNEEH 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 EYASKKRKKDHFRNDTNTQSFYREKWIYVHKESTKERHGYCTLGEAFNRLDFSSAIQDIR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 EYASKKRKKDHFRNDTNTQSFYREKWIYVHKESTKERHGYCTLGEAFNRLDFSSAIQDIR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 RFNYVVKLLQLIAKSQLTSLSGVAQKNYFNILDKIVQKVLDDHHNPRLIKDLLQDLSSTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 RFNYVVKLLQLIAKSQLTSLSGVAQKNYFNILDKIVQKVLDDHHNPRLIKDLLQDLSSTL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 CILIRGVGKSVLVGNINIWICRLETILAWQQQLQDLQMTKQVNNGLTLSDLPLHMLNNIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 CILIRGVGKSVLVGNINIWICRLETILAWQQQLQDLQMTKQVNNGLTLSDLPLHMLNNIL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 YRFSDGWDIITLGQVTPTLYMLSEDRQLWKKLCQYHFAEKQFCRHLILSEKGHIEWKLMY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 YRFSDGWDIITLGQVTPTLYMLSEDRQLWKKLCQYHFAEKQFCRHLILSEKGHIEWKLMY 250 260 270 280 290 300 310 320 330 340 350 pF1KE3 FALQKHYPAKEQYGDTLHFCRHCSILFWKD---------SGHPCTAADPDSCFTPVSPQH :::::::::::::::::::::::::::::: ::::::::::::::::::::: CCDS59 FALQKHYPAKEQYGDTLHFCRHCSILFWKDYHLALLFKDSGHPCTAADPDSCFTPVSPQH 310 320 330 340 350 360 pF1KE3 FIDLFKF ::::::: CCDS59 FIDLFKF >>CCDS5954.1 FBXO25 gene_id:26260|Hs108|chr8 (291 aa) initn: 1813 init1: 1813 opt: 1815 Z-score: 2225.5 bits: 420.0 E(32554): 1.2e-117 Smith-Waterman score: 1815; 94.0% identity (97.2% similar) in 283 aa overlap (78-358:9-291) 50 60 70 80 90 100 pF1KE3 NSEDGEIFNNEEHEYASKKRKKDHFRNDTNTQSFYREKWIYVHKESTK--ERHGYCTLGE .....:.: . : :. .::::::::: CCDS59 MEKYSIMKSMNMHRKKGKRTILEMTQILKRHGYCTLGE 10 20 30 110 120 130 140 150 160 pF1KE3 AFNRLDFSSAIQDIRRFNYVVKLLQLIAKSQLTSLSGVAQKNYFNILDKIVQKVLDDHHN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 AFNRLDFSSAIQDIRRFNYVVKLLQLIAKSQLTSLSGVAQKNYFNILDKIVQKVLDDHHN 40 50 60 70 80 90 170 180 190 200 210 220 pF1KE3 PRLIKDLLQDLSSTLCILIRGVGKSVLVGNINIWICRLETILAWQQQLQDLQMTKQVNNG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 PRLIKDLLQDLSSTLCILIRGVGKSVLVGNINIWICRLETILAWQQQLQDLQMTKQVNNG 100 110 120 130 140 150 230 240 250 260 270 280 pF1KE3 LTLSDLPLHMLNNILYRFSDGWDIITLGQVTPTLYMLSEDRQLWKKLCQYHFAEKQFCRH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 LTLSDLPLHMLNNILYRFSDGWDIITLGQVTPTLYMLSEDRQLWKKLCQYHFAEKQFCRH 160 170 180 190 200 210 290 300 310 320 330 340 pF1KE3 LILSEKGHIEWKLMYFALQKHYPAKEQYGDTLHFCRHCSILFWKDSGHPCTAADPDSCFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 LILSEKGHIEWKLMYFALQKHYPAKEQYGDTLHFCRHCSILFWKDSGHPCTAADPDSCFT 220 230 240 250 260 270 350 pF1KE3 PVSPQHFIDLFKF ::::::::::::: CCDS59 PVSPQHFIDLFKF 280 290 >>CCDS6345.1 FBXO32 gene_id:114907|Hs108|chr8 (355 aa) initn: 1545 init1: 1388 opt: 1547 Z-score: 1895.9 bits: 359.3 E(32554): 2.8e-99 Smith-Waterman score: 1547; 61.4% identity (84.2% similar) in 360 aa overlap (1-358:1-355) 10 20 30 40 50 pF1KE3 MPFLGQDWRSPGWSWIKTEDGWKRC--ESCSQKLERENNHCNISHSIILNSEDGEIFNNE :::::::::::: .:.:: ::::: :. .. . ...:: . . :.:. .::. CCDS63 MPFLGQDWRSPGQNWVKTADGWKRFLDEKSGSFVSDLSSYCN---KEVYNKEN--LFNSL 10 20 30 40 50 60 70 80 90 100 110 pF1KE3 EHEYASKKRKKDHFRNDTNTQSFYREKWIYVHKESTKERHGYCTLGEAFNRLDFSSAIQD ... :.:::::: . . :.:: :..:::::::: :::::::::::::::::::::.:: : CCDS63 NYDVAAKKRKKDMLNSKTKTQYFHQEKWIYVHKGSTKERHGYCTLGEAFNRLDFSTAILD 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE3 IRRFNYVVKLLQLIAKSQLTSLSGVAQKNYFNILDKIVQKVLDDHHNPRLIKDLLQDLSS :::::::.::.::::::::::::.::::..:::.:.: :::.:..: :::..::: : . CCDS63 SRRFNYVVRLLELIAKSQLTSLSGIAQKNFMNILEKVVLKVLEDQQNIRLIRELLQTLYT 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE3 TLCILIRGVGKSVLVGNINIWICRLETILAWQQQLQDLQMTKQVNNGLTLSDLPLHMLNN .:: :.. :::::::::::.:. :.:::: :::::...:.:. . .:::..:::: . : CCDS63 SLCTLVQRVGKSVLVGNINMWVYRMETILHWQQQLNNIQITRPAFKGLTFTDLPLCLQLN 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE3 ILYRFSDGWDIITLGQVTPTLYMLSEDRQLWKKLCQYHFAEKQFCRHLILSEKGHIEWKL :. :.::: :...:::..: :..::::: ::::::::::.:.:. ..::::.::...:: CCDS63 IMQRLSDGRDLVSLGQAAPDLHVLSEDRLLWKKLCQYHFSERQIRKRLILSDKGQLDWKK 240 250 260 270 280 290 300 310 320 330 340 350 pF1KE3 MYFALQKHYPAKEQYGDTLHFCRHCSILFWKDSGHPCTAADPDSCFTPVSPQHFIDLFKF ::: : . :: ::::::::..:.:: :: :: . ::::: .:.:: . .::: ::.:::: CCDS63 MYFKLVRCYPRKEQYGDTLQLCKHCHILSWKGTDHPCTANNPESCSVSLSPQDFINLFKF 300 310 320 330 340 350 >>CCDS56553.1 FBXO32 gene_id:114907|Hs108|chr8 (262 aa) initn: 1115 init1: 618 opt: 618 Z-score: 760.3 bits: 148.8 E(32554): 5e-36 Smith-Waterman score: 936; 44.4% identity (60.8% similar) in 360 aa overlap (1-358:1-262) 10 20 30 40 50 pF1KE3 MPFLGQDWRSPGWSWIKTEDGWKRC--ESCSQKLERENNHCNISHSIILNSEDGEIFNNE :::::::::::: .:.:: ::::: :. .. . ...:: . . :.:. .::. CCDS56 MPFLGQDWRSPGQNWVKTADGWKRFLDEKSGSFVSDLSSYCN---KEVYNKEN--LFNSL 10 20 30 40 50 60 70 80 90 100 110 pF1KE3 EHEYASKKRKKDHFRNDTNTQSFYREKWIYVHKESTKERHGYCTLGEAFNRLDFSSAIQD ... :.:::::: . . :.:: :..:::::::: :::::::::::::::::::::.:: : CCDS56 NYDVAAKKRKKDMLNSKTKTQYFHQEKWIYVHKGSTKERHGYCTLGEAFNRLDFSTAILD 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE3 IRRFNYVVKLLQLIAKSQLTSLSGVAQKNYFNILDKIVQKVLDDHHNPRLIKDLLQDLSS :::::::. : . CCDS56 SRRFNYVVR--------------------------------------PAF---------- 120 180 190 200 210 220 230 pF1KE3 TLCILIRGVGKSVLVGNINIWICRLETILAWQQQLQDLQMTKQVNNGLTLSDLPLHMLNN .:::..:::: . : CCDS56 ---------------------------------------------KGLTFTDLPLCLQLN 130 140 240 250 260 270 280 290 pF1KE3 ILYRFSDGWDIITLGQVTPTLYMLSEDRQLWKKLCQYHFAEKQFCRHLILSEKGHIEWKL :. :.::: :...:::..: :..::::: ::::::::::.:.:. ..::::.::...:: CCDS56 IMQRLSDGRDLVSLGQAAPDLHVLSEDRLLWKKLCQYHFSERQIRKRLILSDKGQLDWKK 150 160 170 180 190 200 300 310 320 330 340 350 pF1KE3 MYFALQKHYPAKEQYGDTLHFCRHCSILFWKDSGHPCTAADPDSCFTPVSPQHFIDLFKF ::: : . :: ::::::::..:.:: :: :: . ::::: .:.:: . .::: ::.:::: CCDS56 MYFKLVRCYPRKEQYGDTLQLCKHCHILSWKGTDHPCTANNPESCSVSLSPQDFINLFKF 210 220 230 240 250 260 358 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 19:07:00 2016 done: Mon Nov 7 19:07:00 2016 Total Scan time: 1.960 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]