Result of FASTA (ccds) for
pFN21AE4028
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE4028, 236 aa
1>>>pF1KE4028 236 - 236 aa - 236 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.7245+/-0.00086; mu= 18.2348+/- 0.052
mean_var=81.3220+/-16.360, 0's: 0 Z-trim(108.4): 192 B-trim: 334 in 1/50
Lambda= 0.142223
statistics sampled from 9948 (10171) to 9948 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.692), E-opt: 0.2 (0.312), width: 16
Scan time: 1.630
The best scores are: opt bits E(32554)
CCDS58037.1 RIT1 gene_id:6016|Hs108|chr1 ( 236) 1566 330.6 5.6e-91
CCDS1123.1 RIT1 gene_id:6016|Hs108|chr1 ( 219) 1451 306.9 6.8e-84
CCDS58036.1 RIT1 gene_id:6016|Hs108|chr1 ( 183) 1207 256.8 7.1e-69
CCDS11921.1 RIT2 gene_id:6014|Hs108|chr18 ( 217) 968 207.8 4.6e-54
CCDS62431.1 RIT2 gene_id:6014|Hs108|chr18 ( 153) 683 149.2 1.5e-36
CCDS7814.1 RRAS2 gene_id:22800|Hs108|chr11 ( 204) 631 138.6 2.9e-33
CCDS8702.1 KRAS gene_id:3845|Hs108|chr12 ( 188) 609 134.1 6.2e-32
CCDS8703.1 KRAS gene_id:3845|Hs108|chr12 ( 189) 588 129.8 1.2e-30
CCDS7698.1 HRAS gene_id:3265|Hs108|chr11 ( 189) 585 129.2 1.9e-30
CCDS8984.1 RAP1B gene_id:5908|Hs108|chr12 ( 184) 584 128.9 2.2e-30
CCDS9485.1 RAP2A gene_id:5911|Hs108|chr13 ( 183) 581 128.3 3.3e-30
CCDS840.1 RAP1A gene_id:5906|Hs108|chr1 ( 184) 581 128.3 3.3e-30
CCDS3100.1 MRAS gene_id:22808|Hs108|chr3 ( 208) 581 128.4 3.6e-30
CCDS12774.1 RRAS gene_id:6237|Hs108|chr19 ( 218) 577 127.6 6.5e-30
CCDS877.1 NRAS gene_id:4893|Hs108|chr1 ( 189) 576 127.3 6.8e-30
CCDS14632.1 RAP2C gene_id:57826|Hs108|chrX ( 183) 574 126.9 8.9e-30
CCDS3170.1 RAP2B gene_id:5912|Hs108|chr3 ( 183) 573 126.7 1e-29
CCDS5460.1 RALA gene_id:5898|Hs108|chr7 ( 206) 539 119.8 1.4e-27
CCDS2131.1 RALB gene_id:5899|Hs108|chr2 ( 206) 534 118.7 2.8e-27
CCDS7699.1 HRAS gene_id:3265|Hs108|chr11 ( 170) 528 117.4 5.9e-27
CCDS53603.1 RRAS2 gene_id:22800|Hs108|chr11 ( 169) 526 117.0 7.8e-27
CCDS8673.1 RERG gene_id:85004|Hs108|chr12 ( 199) 496 110.9 6.2e-25
CCDS6261.1 GEM gene_id:2669|Hs108|chr8 ( 296) 415 94.5 8.1e-20
CCDS10200.1 RASL12 gene_id:51285|Hs108|chr15 ( 266) 411 93.6 1.3e-19
CCDS12092.1 DIRAS1 gene_id:148252|Hs108|chr19 ( 198) 407 92.7 1.9e-19
CCDS6687.1 DIRAS2 gene_id:54769|Hs108|chr9 ( 199) 398 90.8 7e-19
CCDS10824.1 RRAD gene_id:6236|Hs108|chr16 ( 308) 397 90.8 1.1e-18
CCDS45082.1 REM2 gene_id:161253|Hs108|chr14 ( 340) 390 89.4 3.1e-18
CCDS53753.1 RERG gene_id:85004|Hs108|chr12 ( 180) 376 86.3 1.5e-17
CCDS44544.1 RRAS2 gene_id:22800|Hs108|chr11 ( 127) 373 85.5 1.8e-17
CCDS13181.1 REM1 gene_id:28954|Hs108|chr20 ( 298) 373 85.9 3.2e-17
CCDS3490.1 RASL11B gene_id:65997|Hs108|chr4 ( 248) 371 85.4 3.8e-17
CCDS9321.1 RASL11A gene_id:387496|Hs108|chr13 ( 242) 362 83.5 1.3e-16
CCDS35246.1 ERAS gene_id:3266|Hs108|chrX ( 233) 358 82.7 2.3e-16
CCDS58253.1 RAP1B gene_id:5908|Hs108|chr12 ( 165) 356 82.1 2.4e-16
CCDS6175.1 RAB2A gene_id:5862|Hs108|chr8 ( 212) 356 82.2 2.9e-16
CCDS9570.1 RAB2B gene_id:84932|Hs108|chr14 ( 216) 352 81.4 5.1e-16
CCDS58254.1 RAP1B gene_id:5908|Hs108|chr12 ( 142) 348 80.4 6.8e-16
CCDS5927.1 RHEB gene_id:6009|Hs108|chr7 ( 184) 348 80.5 8.1e-16
CCDS8778.1 RHEBL1 gene_id:121268|Hs108|chr12 ( 183) 347 80.3 9.3e-16
CCDS58855.1 MRAS gene_id:22808|Hs108|chr3 ( 132) 335 77.7 4.1e-15
CCDS1058.1 RAB13 gene_id:5872|Hs108|chr1 ( 203) 332 77.3 8.5e-15
CCDS41846.1 RAB35 gene_id:11021|Hs108|chr12 ( 201) 331 77.1 9.7e-15
CCDS12339.1 RAB8A gene_id:4218|Hs108|chr19 ( 207) 329 76.7 1.3e-14
CCDS31613.1 RAB1B gene_id:81876|Hs108|chr11 ( 201) 328 76.5 1.5e-14
CCDS641.1 DIRAS3 gene_id:9077|Hs108|chr1 ( 229) 326 76.1 2.2e-14
CCDS66332.1 RERGL gene_id:79785|Hs108|chr12 ( 204) 325 75.9 2.3e-14
CCDS46306.1 RAB1A gene_id:5861|Hs108|chr2 ( 205) 325 75.9 2.3e-14
CCDS3082.1 RAB6B gene_id:51560|Hs108|chr3 ( 208) 323 75.5 3.1e-14
CCDS76024.1 RAP2C gene_id:57826|Hs108|chrX ( 117) 319 74.4 3.7e-14
>>CCDS58037.1 RIT1 gene_id:6016|Hs108|chr1 (236 aa)
initn: 1566 init1: 1566 opt: 1566 Z-score: 1746.8 bits: 330.6 E(32554): 5.6e-91
Smith-Waterman score: 1566; 99.6% identity (100.0% similar) in 236 aa overlap (1-236:1-236)
10 20 30 40 50 60
pF1KE4 MERWLFLGATQEGPKRTMDSGTRPVGSCCSSPAGLSREYKLVMLGAGGVGKSAMTMQFIS
::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MERWLFLGATEEGPKRTMDSGTRPVGSCCSSPAGLSREYKLVMLGAGGVGKSAMTMQFIS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 HRFPEDHDPTIEDAYKIRIRIDDEPANLDILDTAGQAEFTAMRDQYMRAGEGFIICYSIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 HRFPEDHDPTIEDAYKIRIRIDDEPANLDILDTAGQAEFTAMRDQYMRAGEGFIICYSIT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 DRRSFHEVREFKQLIYRVRRTDDTPVVLVGNKSDLKQLRQVTKEEGLALAREFSCPFFET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 DRRSFHEVREFKQLIYRVRRTDDTPVVLVGNKSDLKQLRQVTKEEGLALAREFSCPFFET
130 140 150 160 170 180
190 200 210 220 230
pF1KE4 SAAYRYYIDDVFHALVREIRRKEKEAVLAMEKKSKPKNSVWKRLKSPFRKKKDSVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 SAAYRYYIDDVFHALVREIRRKEKEAVLAMEKKSKPKNSVWKRLKSPFRKKKDSVT
190 200 210 220 230
>>CCDS1123.1 RIT1 gene_id:6016|Hs108|chr1 (219 aa)
initn: 1451 init1: 1451 opt: 1451 Z-score: 1619.6 bits: 306.9 E(32554): 6.8e-84
Smith-Waterman score: 1451; 100.0% identity (100.0% similar) in 219 aa overlap (18-236:1-219)
10 20 30 40 50 60
pF1KE4 MERWLFLGATQEGPKRTMDSGTRPVGSCCSSPAGLSREYKLVMLGAGGVGKSAMTMQFIS
:::::::::::::::::::::::::::::::::::::::::::
CCDS11 MDSGTRPVGSCCSSPAGLSREYKLVMLGAGGVGKSAMTMQFIS
10 20 30 40
70 80 90 100 110 120
pF1KE4 HRFPEDHDPTIEDAYKIRIRIDDEPANLDILDTAGQAEFTAMRDQYMRAGEGFIICYSIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 HRFPEDHDPTIEDAYKIRIRIDDEPANLDILDTAGQAEFTAMRDQYMRAGEGFIICYSIT
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE4 DRRSFHEVREFKQLIYRVRRTDDTPVVLVGNKSDLKQLRQVTKEEGLALAREFSCPFFET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 DRRSFHEVREFKQLIYRVRRTDDTPVVLVGNKSDLKQLRQVTKEEGLALAREFSCPFFET
110 120 130 140 150 160
190 200 210 220 230
pF1KE4 SAAYRYYIDDVFHALVREIRRKEKEAVLAMEKKSKPKNSVWKRLKSPFRKKKDSVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 SAAYRYYIDDVFHALVREIRRKEKEAVLAMEKKSKPKNSVWKRLKSPFRKKKDSVT
170 180 190 200 210
>>CCDS58036.1 RIT1 gene_id:6016|Hs108|chr1 (183 aa)
initn: 1207 init1: 1207 opt: 1207 Z-score: 1350.0 bits: 256.8 E(32554): 7.1e-69
Smith-Waterman score: 1207; 100.0% identity (100.0% similar) in 183 aa overlap (54-236:1-183)
30 40 50 60 70 80
pF1KE4 PVGSCCSSPAGLSREYKLVMLGAGGVGKSAMTMQFISHRFPEDHDPTIEDAYKIRIRIDD
::::::::::::::::::::::::::::::
CCDS58 MTMQFISHRFPEDHDPTIEDAYKIRIRIDD
10 20 30
90 100 110 120 130 140
pF1KE4 EPANLDILDTAGQAEFTAMRDQYMRAGEGFIICYSITDRRSFHEVREFKQLIYRVRRTDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 EPANLDILDTAGQAEFTAMRDQYMRAGEGFIICYSITDRRSFHEVREFKQLIYRVRRTDD
40 50 60 70 80 90
150 160 170 180 190 200
pF1KE4 TPVVLVGNKSDLKQLRQVTKEEGLALAREFSCPFFETSAAYRYYIDDVFHALVREIRRKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 TPVVLVGNKSDLKQLRQVTKEEGLALAREFSCPFFETSAAYRYYIDDVFHALVREIRRKE
100 110 120 130 140 150
210 220 230
pF1KE4 KEAVLAMEKKSKPKNSVWKRLKSPFRKKKDSVT
:::::::::::::::::::::::::::::::::
CCDS58 KEAVLAMEKKSKPKNSVWKRLKSPFRKKKDSVT
160 170 180
>>CCDS11921.1 RIT2 gene_id:6014|Hs108|chr18 (217 aa)
initn: 966 init1: 874 opt: 968 Z-score: 1084.1 bits: 207.8 E(32554): 4.6e-54
Smith-Waterman score: 968; 69.2% identity (89.6% similar) in 211 aa overlap (27-236:8-217)
10 20 30 40 50
pF1KE4 MERWLFLGATQEGPKRTMDSGTRPVGSCC-SSPAGLSREYKLVMLGAGGVGKSAMTMQFI
:: .: .: :::::.::::::::::::::::::
CCDS11 MEVENEASCSPGSASGGSREYKVVMLGAGGVGKSAMTMQFI
10 20 30 40
60 70 80 90 100 110
pF1KE4 SHRFPEDHDPTIEDAYKIRIRIDDEPANLDILDTAGQAEFTAMRDQYMRAGEGFIICYSI
::.::. :::::::::: ..:::.::: ::::::::::::::::.::::.:::::::::.
CCDS11 SHQFPDYHDPTIEDAYKTQVRIDNEPAYLDILDTAGQAEFTAMREQYMRGGEGFIICYSV
50 60 70 80 90 100
120 130 140 150 160 170
pF1KE4 TDRRSFHEVREFKQLIYRVRRTDDTPVVLVGNKSDLKQLRQVTKEEGLALAREFSCPFFE
:::.::.:. .::.::..::.: . :.:::::: ::.:.:::. ::::.::.:..: :::
CCDS11 TDRQSFQEAAKFKELIFQVRHTYEIPLVLVGNKIDLEQFRQVSTEEGLSLAQEYNCGFFE
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE4 TSAAYRYYIDDVFHALVREIRRKEKEAVLAMEKKSKPKNSVWKRLKSPFRKKKDSVT
:::: :. :::.::.::::::.::. : :::: : :.:.::.::. ..::....:
CCDS11 TSAALRFCIDDAFHGLVREIRKKESMPSL-MEKKLKRKDSLWKKLKGSLKKKRENMT
170 180 190 200 210
>>CCDS62431.1 RIT2 gene_id:6014|Hs108|chr18 (153 aa)
initn: 682 init1: 668 opt: 683 Z-score: 769.9 bits: 149.2 E(32554): 1.5e-36
Smith-Waterman score: 683; 73.9% identity (90.1% similar) in 142 aa overlap (27-166:8-149)
10 20 30 40 50
pF1KE4 MERWLFLGATQEGPKRTMDSGTRPVGSCC-SSPAGLSREYKLVMLGAGGVGKSAMTMQFI
:: .: .: :::::.::::::::::::::::::
CCDS62 MEVENEASCSPGSASGGSREYKVVMLGAGGVGKSAMTMQFI
10 20 30 40
60 70 80 90 100 110
pF1KE4 SHRFPEDHDPTIEDAYKIRIRIDDEPANLDILDTAGQAEFTAMRDQYMRAGEGFIICYSI
::.::. :::::::::: ..:::.::: ::::::::::::::::.::::.:::::::::.
CCDS62 SHQFPDYHDPTIEDAYKTQVRIDNEPAYLDILDTAGQAEFTAMREQYMRGGEGFIICYSV
50 60 70 80 90 100
120 130 140 150 160 170
pF1KE4 TDRRSFHEVREFKQLIYRVRRTDDTPVVLVGNKSDLKQLRQVT-KEEGLALAREFSCPFF
:::.::.:. .::.::..::.: . :.:::::: ::.:.:: : :: :
CCDS62 TDRQSFQEAAKFKELIFQVRHTYEIPLVLVGNKIDLEQFRQPTLKEFGREEF
110 120 130 140 150
180 190 200 210 220 230
pF1KE4 ETSAAYRYYIDDVFHALVREIRRKEKEAVLAMEKKSKPKNSVWKRLKSPFRKKKDSVT
>>CCDS7814.1 RRAS2 gene_id:22800|Hs108|chr11 (204 aa)
initn: 649 init1: 610 opt: 631 Z-score: 710.7 bits: 138.6 E(32554): 2.9e-33
Smith-Waterman score: 631; 52.7% identity (78.0% similar) in 182 aa overlap (38-218:14-195)
10 20 30 40 50 60
pF1KE4 GATQEGPKRTMDSGTRPVGSCCSSPAGLSREYKLVMLGAGGVGKSAMTMQFISHRFPEDH
.:.::..:.:::::::.:.:::. : :.
CCDS78 MAAAGWRDGSGQEKYRLVVVGGGGVGKSALTIQFIQSYFVTDY
10 20 30 40
70 80 90 100 110 120
pF1KE4 DPTIEDAYKIRIRIDDEPANLDILDTAGQAEFTAMRDQYMRAGEGFIICYSITDRRSFHE
::::::.: . :::. : ::::::::: :: :::.::::.::::.. .:.::: ::.:
CCDS78 DPTIEDSYTKQCVIDDRAARLDILDTAGQEEFGAMREQYMRTGEGFLLVFSVTDRGSFEE
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE4 VREFKQLIYRVRRTDDTPVVLVGNKSDLKQLRQVTKEEGLALAREFSCPFFETSAAYRYY
. .:.. : ::. :. :..:.:::.:: . ::::.::: :::... ..:.:: :.
CCDS78 IYKFQRQILRVKDRDEFPMILIGNKADLDHQRQVTQEEGQQLARQLKVTYMEASAKIRMN
110 120 130 140 150 160
190 200 210 220 230
pF1KE4 IDDVFHALVREIRR-KEKEAVLAMEKKSKPKNSVWKRLKSPFRKKKDSVT
.:..:: ::: ::. .:.: . : : :.
CCDS78 VDQAFHELVRVIRKFQEQECPPSPEPTRKEKDKKGCHCVIF
170 180 190 200
>>CCDS8702.1 KRAS gene_id:3845|Hs108|chr12 (188 aa)
initn: 617 init1: 470 opt: 609 Z-score: 686.7 bits: 134.1 E(32554): 6.2e-32
Smith-Waterman score: 609; 51.9% identity (81.2% similar) in 181 aa overlap (38-217:3-182)
10 20 30 40 50 60
pF1KE4 GATQEGPKRTMDSGTRPVGSCCSSPAGLSREYKLVMLGAGGVGKSAMTMQFISHRFPEDH
:::::..:::::::::.:.:.:...: ...
CCDS87 MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEY
10 20 30
70 80 90 100 110 120
pF1KE4 DPTIEDAYKIRIRIDDEPANLDILDTAGQAEFTAMRDQYMRAGEGFIICYSITDRRSFHE
::::::.:. .. :: : ::::::::: :..::::::::.::::. ..:.. .::..
CCDS87 DPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFED
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE4 VREFKQLIYRVRRTDDTPVVLVGNKSDLKQLRQVTKEEGLALAREFSCPFFETSAAYRYY
...... : ::. ..:.:.:::::: :: . : : ... ::: .. ::.:::: :
CCDS87 IHHYREQIKRVKDSEDVPMVLVGNKCDLPS-RTVDTKQAQDLARSYGIPFIETSAKTRQG
100 110 120 130 140 150
190 200 210 220 230
pF1KE4 IDDVFHALVREIRR-KEKEAVLAMEKKSKPKNSVWKRLKSPFRKKKDSVT
.::.:..::::::. ::: . . .::.: :
CCDS87 VDDAFYTLVREIRKHKEKMSKDGKKKKKKSKTKCVIM
160 170 180
>>CCDS8703.1 KRAS gene_id:3845|Hs108|chr12 (189 aa)
initn: 587 init1: 469 opt: 588 Z-score: 663.4 bits: 129.8 E(32554): 1.2e-30
Smith-Waterman score: 588; 50.3% identity (80.6% similar) in 175 aa overlap (38-212:3-176)
10 20 30 40 50 60
pF1KE4 GATQEGPKRTMDSGTRPVGSCCSSPAGLSREYKLVMLGAGGVGKSAMTMQFISHRFPEDH
:::::..:::::::::.:.:.:...: ...
CCDS87 MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEY
10 20 30
70 80 90 100 110 120
pF1KE4 DPTIEDAYKIRIRIDDEPANLDILDTAGQAEFTAMRDQYMRAGEGFIICYSITDRRSFHE
::::::.:. .. :: : ::::::::: :..::::::::.::::. ..:.. .::..
CCDS87 DPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFED
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE4 VREFKQLIYRVRRTDDTPVVLVGNKSDLKQLRQVTKEEGLALAREFSCPFFETSAAYRYY
...... : ::. ..:.:.:::::: :: . : : ... ::: .. ::.:::: :
CCDS87 IHHYREQIKRVKDSEDVPMVLVGNKCDLPS-RTVDTKQAQDLARSYGIPFIETSAKTRQR
100 110 120 130 140 150
190 200 210 220 230
pF1KE4 IDDVFHALVREIRRKEKEAVLAMEKKSKPKNSVWKRLKSPFRKKKDSVT
..:.:..::::::. . . . ::
CCDS87 VEDAFYTLVREIRQYRLKKISKEEKTPGCVKIKKCIIM
160 170 180
>>CCDS7698.1 HRAS gene_id:3265|Hs108|chr11 (189 aa)
initn: 577 init1: 477 opt: 585 Z-score: 660.1 bits: 129.2 E(32554): 1.9e-30
Smith-Waterman score: 585; 51.8% identity (83.1% similar) in 166 aa overlap (38-203:3-167)
10 20 30 40 50 60
pF1KE4 GATQEGPKRTMDSGTRPVGSCCSSPAGLSREYKLVMLGAGGVGKSAMTMQFISHRFPEDH
:::::..:::::::::.:.:.:...: ...
CCDS76 MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEY
10 20 30
70 80 90 100 110 120
pF1KE4 DPTIEDAYKIRIRIDDEPANLDILDTAGQAEFTAMRDQYMRAGEGFIICYSITDRRSFHE
::::::.:. .. :: : ::::::::: :..::::::::.::::. ..:.. .::..
CCDS76 DPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFED
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE4 VREFKQLIYRVRRTDDTPVVLVGNKSDLKQLRQVTKEEGLALAREFSCPFFETSAAYRYY
...... : ::. .::.:.:::::: :: : : .... ::: .. :..:::: :
CCDS76 IHQYREQIKRVKDSDDVPMVLVGNKCDLAA-RTVESRQAQDLARSYGIPYIETSAKTRQG
100 110 120 130 140 150
190 200 210 220 230
pF1KE4 IDDVFHALVREIRRKEKEAVLAMEKKSKPKNSVWKRLKSPFRKKKDSVT
..:.:..::::::...
CCDS76 VEDAFYTLVREIRQHKLRKLNPPDESGPGCMSCKCVLS
160 170 180
>>CCDS8984.1 RAP1B gene_id:5908|Hs108|chr12 (184 aa)
initn: 508 init1: 508 opt: 584 Z-score: 659.1 bits: 128.9 E(32554): 2.2e-30
Smith-Waterman score: 584; 49.2% identity (77.1% similar) in 179 aa overlap (37-214:2-180)
10 20 30 40 50 60
pF1KE4 LGATQEGPKRTMDSGTRPVGSCCSSPAGLSREYKLVMLGAGGVGKSAMTMQFISHRFPED
::::::.::.:::::::.:.::.. : :
CCDS89 MREYKLVVLGSGGVGKSALTVQFVQGIFVEK
10 20 30
70 80 90 100 110 120
pF1KE4 HDPTIEDAYKIRIRIDDEPANLDILDTAGQAEFTAMRDQYMRAGEGFIICYSITDRRSFH
.::::::.:. ....: . :.:::::: .:::::: ::. :.:: . :::: . .:.
CCDS89 YDPTIEDSYRKQVEVDAQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFN
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE4 EVREFKQLIYRVRRTDDTPVVLVGNKSDLKQLRQVTKEEGLALAREFS-CPFFETSAAYR
....... : ::. :::.:..::::: ::.. : : ::.: :::... : :.:.:: .
CCDS89 DLQDLREQILRVKDTDDVPMILVGNKCDLEDERVVGKEQGQNLARQWNNCAFLESSAKSK
100 110 120 130 140 150
190 200 210 220 230
pF1KE4 YYIDDVFHALVREIRRKEKEAVLAMEKKSKPKNSVWKRLKSPFRKKKDSVT
....:. :::.: :: : .:.:
CCDS89 INVNEIFYDLVRQINRKTPVPGKARKKSSCQLL
160 170 180
236 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 19:02:32 2016 done: Mon Nov 7 19:02:33 2016
Total Scan time: 1.630 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]