FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3252, 588 aa 1>>>pF1KE3252 588 - 588 aa - 588 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.7376+/-0.00105; mu= 18.2081+/- 0.064 mean_var=95.5812+/-19.140, 0's: 0 Z-trim(105.5): 37 B-trim: 17 in 1/49 Lambda= 0.131186 statistics sampled from 8443 (8468) to 8443 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.622), E-opt: 0.2 (0.26), width: 16 Scan time: 2.960 The best scores are: opt bits E(32554) CCDS5452.1 NME8 gene_id:51314|Hs108|chr7 ( 588) 3815 732.8 2.8e-211 CCDS4197.1 NME5 gene_id:8382|Hs108|chr5 ( 212) 305 68.2 1.2e-11 >>CCDS5452.1 NME8 gene_id:51314|Hs108|chr7 (588 aa) initn: 3815 init1: 3815 opt: 3815 Z-score: 3906.6 bits: 732.8 E(32554): 2.8e-211 Smith-Waterman score: 3815; 99.7% identity (99.7% similar) in 588 aa overlap (1-588:1-588) 10 20 30 40 50 60 pF1KE3 MASKKREVQLQTVINNQSLWDEMLQNKGLTVIDVYQAWCGPCRAMQPLFRKLKNELNEDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 MASKKREVQLQTVINNQSLWDEMLQNKGLTVIDVYQAWCGPCRAMQPLFRKLKNELNEDE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 ILHFAVAEADNIVTLQPFRDKCEPVFLFSVNGKIIEKIQGANAPLVNKKVINLIDEERKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 ILHFAVAEADNIVTLQPFRDKCEPVFLFSVNGKIIEKIQGANAPLVNKKVINLIDEERKI 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 AAGEMARPQYPEIPLVDSDSEVSEESPCESVQELYSIAIIKPDAVISKKVLEIKRKITKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 AAGEMARPQYPEIPLVDSDSEVSEESPCESVQELYSIAIIKPDAVISKKVLEIKRKITKA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 GFIIEAEHKTVLTEEQVVNFYSRIADQRDFEEFVSFMTSGLSYILVVSQGSKHNPPSEET ::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::: CCDS54 GFIIEAEHKTVLTEEQVVNFYSRIADQCDFEEFVSFMTSGLSYILVVSQGSKHNPPSEET 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 EPQTDTEPNERSEDQPEVEAQVTPGMMKNKQDSLQEYLERQHLAQLCDIEEDAANVAKFM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 EPQTDTEPNERSEDQPEVEAQVTPGMMKNKQDSLQEYLERQHLAQLCDIEEDAANVAKFM 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 DAFFPDFKKMKSMKLEKTLALLRPNLFHERKDDVLRIIKDEDFKILEQRQVVLSEKEAQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 DAFFPDFKKMKSMKLEKTLALLRPNLFHERKDDVLRIIKDEDFKILEQRQVVLSEKEAQA 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 LCKEYENEDYFNKLIENMTSGPSLALVLLRDNGLQYWKQLLGPRTVEEAIEYFPESLCAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 LCKEYENEDYFNKLIENMTSGPSLALVLLRDNGLQYWKQLLGPRTVEEAIEYFPESLCAQ 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE3 FAMDSLPVNQLYGSDSLETAEREIQHFFPLQSTLGLIKPHATSEQREQILKIVKEAGFDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 FAMDSLPVNQLYGSDSLETAEREIQHFFPLQSTLGLIKPHATSEQREQILKIVKEAGFDL 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE3 TQVKKMFLTPEQTEKIYPKVTGKDFYKDLLEMLSVGPSMVMILTKWNAVAEWRRLMGPTD :::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 TQVKKMFLTPEQIEKIYPKVTGKDFYKDLLEMLSVGPSMVMILTKWNAVAEWRRLMGPTD 490 500 510 520 530 540 550 560 570 580 pF1KE3 PEEAKLLSPDSIRAQFGISKLKNIVHGASNAYEAKEVVNRLFEDPEEN :::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 PEEAKLLSPDSIRAQFGISKLKNIVHGASNAYEAKEVVNRLFEDPEEN 550 560 570 580 >>CCDS4197.1 NME5 gene_id:8382|Hs108|chr5 (212 aa) initn: 525 init1: 252 opt: 305 Z-score: 322.4 bits: 68.2 E(32554): 1.2e-11 Smith-Waterman score: 305; 38.0% identity (68.6% similar) in 137 aa overlap (450-586:12-145) 420 430 440 450 460 470 pF1KE3 QFAMDSLPVNQLYGSDSLETAEREIQHFFPLQSTLGLIKPHATSEQREQILKIVKEAGFD ...::..::: . ...:.: :. ..:: CCDS41 MEISMPPPQIYVEKTLAIIKPDIV-DKEEEIQDIILRSGFT 10 20 30 40 480 490 500 510 520 530 pF1KE3 LTQVKKMFLTPEQTEKIYPKVTGKDFYKDLLEMLSVGPSMVMILTKWNAVAEWRRLMGPT ..: .:. :.::: ..: . :: :. .: ..: :: ..:::.. .:.. : .:.::. CCDS41 IVQRRKLRLSPEQCSNFYVEKYGKMFFPNLTAYMSSGPLVAMILARHKAISYWLELLGPN 50 60 70 80 90 100 540 550 560 570 580 pF1KE3 DPEEAKLLSPDSIRAQFGISKLKNIVHGASNAYEAKEVVNRLFEDPEEN . :: :::.:: .: . :.: .:: :: . : : : : :: CCDS41 NSLVAKETHPDSLRAIYGTDDLRNALHG-SNDFAAAEREIR-FMFPEVIVEPIPIGQAAK 110 120 130 140 150 CCDS41 DYLNLHIMPTLLEGLTELCKQKPADPLIWLADWLLKNNPNKPKLCHHPIVEEPY 160 170 180 190 200 210 588 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 18:48:57 2016 done: Mon Nov 7 18:48:57 2016 Total Scan time: 2.960 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]