FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE9619, 418 aa 1>>>pF1KE9619 418 - 418 aa - 418 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 9.0893+/-0.00105; mu= -0.1312+/- 0.063 mean_var=185.9624+/-37.530, 0's: 0 Z-trim(109.7): 9 B-trim: 0 in 0/53 Lambda= 0.094051 statistics sampled from 11056 (11058) to 11056 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.699), E-opt: 0.2 (0.34), width: 16 Scan time: 2.760 The best scores are: opt bits E(32554) CCDS3838.1 CENPU gene_id:79682|Hs108|chr4 ( 418) 2677 375.6 4.8e-104 >>CCDS3838.1 CENPU gene_id:79682|Hs108|chr4 (418 aa) initn: 2677 init1: 2677 opt: 2677 Z-score: 1981.4 bits: 375.6 E(32554): 4.8e-104 Smith-Waterman score: 2677; 100.0% identity (100.0% similar) in 418 aa overlap (1-418:1-418) 10 20 30 40 50 60 pF1KE9 MAPRGRRRPRPHRSEGARRSKNTLERTHSMKDKAGQKCKPIDVFDFPDNSDVSSIGRLGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS38 MAPRGRRRPRPHRSEGARRSKNTLERTHSMKDKAGQKCKPIDVFDFPDNSDVSSIGRLGE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE9 NEKDEETYETFDPPLHSTAIYADEEEFSKHCGLSLSSTPPGKEAKRSSDTSGNEASEIES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS38 NEKDEETYETFDPPLHSTAIYADEEEFSKHCGLSLSSTPPGKEAKRSSDTSGNEASEIES 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE9 VKISAKKPGRKLRPISDDSESIEESDTRRKVKSAEKISTQRHEVIRTTASSELSEKPAES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS38 VKISAKKPGRKLRPISDDSESIEESDTRRKVKSAEKISTQRHEVIRTTASSELSEKPAES 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE9 VTSKKTGPLSAQPSVEKENLAIESQSKTQKKGKISHDKRKKSRSKAIGSDTSDIVHIWCP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS38 VTSKKTGPLSAQPSVEKENLAIESQSKTQKKGKISHDKRKKSRSKAIGSDTSDIVHIWCP 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE9 EGMKTSDIKELNIVLPEFEKTHLEHQQRIESKVCKAAIATFYVNVKEQFIKMLKESQMLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS38 EGMKTSDIKELNIVLPEFEKTHLEHQQRIESKVCKAAIATFYVNVKEQFIKMLKESQMLT 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE9 NLKRKNAKMISDIEKKRQRMIEVQDELLRLEPQLKQLQTKYDELKERKSSLRNAAYFLSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS38 NLKRKNAKMISDIEKKRQRMIEVQDELLRLEPQLKQLQTKYDELKERKSSLRNAAYFLSN 310 320 330 340 350 360 370 380 390 400 410 pF1KE9 LKQLYQDYSDVQAQEPNVKETYDSSSLPALLFKARTLLGAESHLRNINHQLEKLLDQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS38 LKQLYQDYSDVQAQEPNVKETYDSSSLPALLFKARTLLGAESHLRNINHQLEKLLDQG 370 380 390 400 410 418 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 18:43:35 2016 done: Mon Nov 7 18:43:36 2016 Total Scan time: 2.760 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]