FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB6251, 760 aa 1>>>pF1KB6251 760 - 760 aa - 760 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.0971+/-0.00107; mu= 11.2594+/- 0.065 mean_var=101.6192+/-19.932, 0's: 0 Z-trim(104.9): 41 B-trim: 0 in 0/52 Lambda= 0.127229 statistics sampled from 8126 (8151) to 8126 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.608), E-opt: 0.2 (0.25), width: 16 Scan time: 3.290 The best scores are: opt bits E(32554) CCDS5601.1 DMTF1 gene_id:9988|Hs108|chr7 ( 760) 4955 920.8 0 CCDS47633.1 DMTF1 gene_id:9988|Hs108|chr7 ( 672) 4385 816.1 0 >>CCDS5601.1 DMTF1 gene_id:9988|Hs108|chr7 (760 aa) initn: 4955 init1: 4955 opt: 4955 Z-score: 4918.3 bits: 920.8 E(32554): 0 Smith-Waterman score: 4955; 100.0% identity (100.0% similar) in 760 aa overlap (1-760:1-760) 10 20 30 40 50 60 pF1KB6 MSTVEEDSDTVTVETVNSVTLTQDTEGNLILHCPQNEADEIDSEDSIEPPHKRLCLSSED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 MSTVEEDSDTVTVETVNSVTLTQDTEGNLILHCPQNEADEIDSEDSIEPPHKRLCLSSED 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB6 DQSIDDSTPCISVVALPLSENDQSFEVTMTATTEVADDEVTEGTVTQIQILQNEQLDEIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 DQSIDDSTPCISVVALPLSENDQSFEVTMTATTEVADDEVTEGTVTQIQILQNEQLDEIS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB6 PLGNEEVSAVSQAWFTTKEDKDSLTNKGHKWKQGMWSKEEIDILMNNIERYLKARGIKDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 PLGNEEVSAVSQAWFTTKEDKDSLTNKGHKWKQGMWSKEEIDILMNNIERYLKARGIKDA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB6 TEIIFEMSKDERKDFYRTIAWGLNRPLFAVYRRVLRMYDDRNHVGKYTPEEIEKLKELRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 TEIIFEMSKDERKDFYRTIAWGLNRPLFAVYRRVLRMYDDRNHVGKYTPEEIEKLKELRI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB6 KHGNDWATIGAALGRSASSVKDRCRLMKDTCNTGKWTEEEEKRLAEVVHELTSTEPGDIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 KHGNDWATIGAALGRSASSVKDRCRLMKDTCNTGKWTEEEEKRLAEVVHELTSTEPGDIV 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB6 TQGVSWAAVAERVGTRSEKQCRSKWLNYLNWKQSGGTEWTKEDEINLILRIAELDVADEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 TQGVSWAAVAERVGTRSEKQCRSKWLNYLNWKQSGGTEWTKEDEINLILRIAELDVADEN 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB6 DINWDLLAEGWSSVRSPQWLRSKWWTIKRQIANHKDVSFPVLIKGLKQLHENQKNNPTLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 DINWDLLAEGWSSVRSPQWLRSKWWTIKRQIANHKDVSFPVLIKGLKQLHENQKNNPTLL 370 380 390 400 410 420 430 440 450 460 470 480 pF1KB6 ENKSGSGVPNSNTNSSVQHVQIRVARLEDNTAISSSPMAALQIPVQITHVSSADSPATVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 ENKSGSGVPNSNTNSSVQHVQIRVARLEDNTAISSSPMAALQIPVQITHVSSADSPATVD 430 440 450 460 470 480 490 500 510 520 530 540 pF1KB6 SETITLNSGTLQTFEILPSFHLQPTGTPGTYLLQTSSSQGLPLTLTASPTVTLTAAAPAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 SETITLNSGTLQTFEILPSFHLQPTGTPGTYLLQTSSSQGLPLTLTASPTVTLTAAAPAS 490 500 510 520 530 540 550 560 570 580 590 600 pF1KB6 PEQIIVHALSPEHLLNTSDNVTVQCHTPRVIIQTVATEDITSSISQAELTVDSDIQSSDF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 PEQIIVHALSPEHLLNTSDNVTVQCHTPRVIIQTVATEDITSSISQAELTVDSDIQSSDF 550 560 570 580 590 600 610 620 630 640 650 660 pF1KB6 PEPPDALEADTFPDEIHHPKMTVEPSFNDAHVSKFSDQNSTELMNSVMVRTEEEISDTDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 PEPPDALEADTFPDEIHHPKMTVEPSFNDAHVSKFSDQNSTELMNSVMVRTEEEISDTDL 610 620 630 640 650 660 670 680 690 700 710 720 pF1KB6 KQEESPSDLASAYVTEGLESPTIEEQVDQTIDDETILIVPSPHGFIQASDVIDTESVLPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 KQEESPSDLASAYVTEGLESPTIEEQVDQTIDDETILIVPSPHGFIQASDVIDTESVLPL 670 680 690 700 710 720 730 740 750 760 pF1KB6 TTLTDPILQHHQEESNIIGSSLGSPVSEDSKDVEDLVNCH :::::::::::::::::::::::::::::::::::::::: CCDS56 TTLTDPILQHHQEESNIIGSSLGSPVSEDSKDVEDLVNCH 730 740 750 760 >>CCDS47633.1 DMTF1 gene_id:9988|Hs108|chr7 (672 aa) initn: 4385 init1: 4385 opt: 4385 Z-score: 4353.7 bits: 816.1 E(32554): 0 Smith-Waterman score: 4385; 100.0% identity (100.0% similar) in 672 aa overlap (89-760:1-672) 60 70 80 90 100 110 pF1KB6 EDDQSIDDSTPCISVVALPLSENDQSFEVTMTATTEVADDEVTEGTVTQIQILQNEQLDE :::::::::::::::::::::::::::::: CCDS47 MTATTEVADDEVTEGTVTQIQILQNEQLDE 10 20 30 120 130 140 150 160 170 pF1KB6 ISPLGNEEVSAVSQAWFTTKEDKDSLTNKGHKWKQGMWSKEEIDILMNNIERYLKARGIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 ISPLGNEEVSAVSQAWFTTKEDKDSLTNKGHKWKQGMWSKEEIDILMNNIERYLKARGIK 40 50 60 70 80 90 180 190 200 210 220 230 pF1KB6 DATEIIFEMSKDERKDFYRTIAWGLNRPLFAVYRRVLRMYDDRNHVGKYTPEEIEKLKEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 DATEIIFEMSKDERKDFYRTIAWGLNRPLFAVYRRVLRMYDDRNHVGKYTPEEIEKLKEL 100 110 120 130 140 150 240 250 260 270 280 290 pF1KB6 RIKHGNDWATIGAALGRSASSVKDRCRLMKDTCNTGKWTEEEEKRLAEVVHELTSTEPGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 RIKHGNDWATIGAALGRSASSVKDRCRLMKDTCNTGKWTEEEEKRLAEVVHELTSTEPGD 160 170 180 190 200 210 300 310 320 330 340 350 pF1KB6 IVTQGVSWAAVAERVGTRSEKQCRSKWLNYLNWKQSGGTEWTKEDEINLILRIAELDVAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 IVTQGVSWAAVAERVGTRSEKQCRSKWLNYLNWKQSGGTEWTKEDEINLILRIAELDVAD 220 230 240 250 260 270 360 370 380 390 400 410 pF1KB6 ENDINWDLLAEGWSSVRSPQWLRSKWWTIKRQIANHKDVSFPVLIKGLKQLHENQKNNPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 ENDINWDLLAEGWSSVRSPQWLRSKWWTIKRQIANHKDVSFPVLIKGLKQLHENQKNNPT 280 290 300 310 320 330 420 430 440 450 460 470 pF1KB6 LLENKSGSGVPNSNTNSSVQHVQIRVARLEDNTAISSSPMAALQIPVQITHVSSADSPAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 LLENKSGSGVPNSNTNSSVQHVQIRVARLEDNTAISSSPMAALQIPVQITHVSSADSPAT 340 350 360 370 380 390 480 490 500 510 520 530 pF1KB6 VDSETITLNSGTLQTFEILPSFHLQPTGTPGTYLLQTSSSQGLPLTLTASPTVTLTAAAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 VDSETITLNSGTLQTFEILPSFHLQPTGTPGTYLLQTSSSQGLPLTLTASPTVTLTAAAP 400 410 420 430 440 450 540 550 560 570 580 590 pF1KB6 ASPEQIIVHALSPEHLLNTSDNVTVQCHTPRVIIQTVATEDITSSISQAELTVDSDIQSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 ASPEQIIVHALSPEHLLNTSDNVTVQCHTPRVIIQTVATEDITSSISQAELTVDSDIQSS 460 470 480 490 500 510 600 610 620 630 640 650 pF1KB6 DFPEPPDALEADTFPDEIHHPKMTVEPSFNDAHVSKFSDQNSTELMNSVMVRTEEEISDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 DFPEPPDALEADTFPDEIHHPKMTVEPSFNDAHVSKFSDQNSTELMNSVMVRTEEEISDT 520 530 540 550 560 570 660 670 680 690 700 710 pF1KB6 DLKQEESPSDLASAYVTEGLESPTIEEQVDQTIDDETILIVPSPHGFIQASDVIDTESVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 DLKQEESPSDLASAYVTEGLESPTIEEQVDQTIDDETILIVPSPHGFIQASDVIDTESVL 580 590 600 610 620 630 720 730 740 750 760 pF1KB6 PLTTLTDPILQHHQEESNIIGSSLGSPVSEDSKDVEDLVNCH :::::::::::::::::::::::::::::::::::::::::: CCDS47 PLTTLTDPILQHHQEESNIIGSSLGSPVSEDSKDVEDLVNCH 640 650 660 670 760 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 18:08:22 2016 done: Mon Nov 7 18:08:22 2016 Total Scan time: 3.290 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]