FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB5803, 450 aa 1>>>pF1KB5803 450 - 450 aa - 450 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.8866+/-0.000363; mu= 16.5959+/- 0.023 mean_var=113.8210+/-24.750, 0's: 0 Z-trim(115.4): 30 B-trim: 1154 in 1/55 Lambda= 0.120216 statistics sampled from 25829 (25853) to 25829 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.671), E-opt: 0.2 (0.303), width: 16 Scan time: 8.210 The best scores are: opt bits E(85289) NP_068834 (OMIM: 605465) zinc finger protein 277 [ ( 450) 3080 545.2 1.3e-154 XP_011514070 (OMIM: 605465) PREDICTED: zinc finger ( 372) 2542 451.9 1.4e-126 XP_016867209 (OMIM: 605465) PREDICTED: zinc finger ( 332) 2216 395.3 1.3e-109 XP_005250186 (OMIM: 605465) PREDICTED: zinc finger ( 332) 2216 395.3 1.3e-109 >>NP_068834 (OMIM: 605465) zinc finger protein 277 [Homo (450 aa) initn: 3080 init1: 3080 opt: 3080 Z-score: 2897.0 bits: 545.2 E(85289): 1.3e-154 Smith-Waterman score: 3080; 100.0% identity (100.0% similar) in 450 aa overlap (1-450:1-450) 10 20 30 40 50 60 pF1KB5 MAASKTQGAVARMQEDRDGSCSTVGGVGYGDSKDCILEPLSLPESPGGTTTLEGSPSVPC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_068 MAASKTQGAVARMQEDRDGSCSTVGGVGYGDSKDCILEPLSLPESPGGTTTLEGSPSVPC 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB5 IFCEEHFPVAEQDKLLKHMIIEHKIVIADVKLVADFQRYILYWRKRFTEQPITDFCSVIR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_068 IFCEEHFPVAEQDKLLKHMIIEHKIVIADVKLVADFQRYILYWRKRFTEQPITDFCSVIR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB5 INSTAPFEEQENYFLLCDVLPEDRILREELQKQRLREILEQQQQERNDTNFHGVCMFCNE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_068 INSTAPFEEQENYFLLCDVLPEDRILREELQKQRLREILEQQQQERNDTNFHGVCMFCNE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB5 EFLGNRSVILNHMAREHAFNIGLPDNIVNCNEFLCTLQKKLDNLQCLYCEKTFRDKNTLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_068 EFLGNRSVILNHMAREHAFNIGLPDNIVNCNEFLCTLQKKLDNLQCLYCEKTFRDKNTLK 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB5 DHMRKKQHRKINPKNREYDRFYVINYLELGKSWEEVQLEDDRELLDHQEDDWSDWEEHPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_068 DHMRKKQHRKINPKNREYDRFYVINYLELGKSWEEVQLEDDRELLDHQEDDWSDWEEHPA 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB5 SAVCLFCEKQAETIEKLYVHMEDAHEFDLLKIKSELGLNFYQQVKLVNFIRRQVHQCRCY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_068 SAVCLFCEKQAETIEKLYVHMEDAHEFDLLKIKSELGLNFYQQVKLVNFIRRQVHQCRCY 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB5 GCHVKFKSKADLRTHMEETKHTSLLPDRKTWDQLEYYFPTYENDTLLCTLSDSESDLTAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_068 GCHVKFKSKADLRTHMEETKHTSLLPDRKTWDQLEYYFPTYENDTLLCTLSDSESDLTAQ 370 380 390 400 410 420 430 440 450 pF1KB5 EQNENVPIISEDTSKLYALKQSSILNQLLL :::::::::::::::::::::::::::::: NP_068 EQNENVPIISEDTSKLYALKQSSILNQLLL 430 440 450 >>XP_011514070 (OMIM: 605465) PREDICTED: zinc finger pro (372 aa) initn: 2542 init1: 2542 opt: 2542 Z-score: 2393.8 bits: 451.9 E(85289): 1.4e-126 Smith-Waterman score: 2542; 100.0% identity (100.0% similar) in 372 aa overlap (79-450:1-372) 50 60 70 80 90 100 pF1KB5 TTTLEGSPSVPCIFCEEHFPVAEQDKLLKHMIIEHKIVIADVKLVADFQRYILYWRKRFT :::::::::::::::::::::::::::::: XP_011 MIIEHKIVIADVKLVADFQRYILYWRKRFT 10 20 30 110 120 130 140 150 160 pF1KB5 EQPITDFCSVIRINSTAPFEEQENYFLLCDVLPEDRILREELQKQRLREILEQQQQERND :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 EQPITDFCSVIRINSTAPFEEQENYFLLCDVLPEDRILREELQKQRLREILEQQQQERND 40 50 60 70 80 90 170 180 190 200 210 220 pF1KB5 TNFHGVCMFCNEEFLGNRSVILNHMAREHAFNIGLPDNIVNCNEFLCTLQKKLDNLQCLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 TNFHGVCMFCNEEFLGNRSVILNHMAREHAFNIGLPDNIVNCNEFLCTLQKKLDNLQCLY 100 110 120 130 140 150 230 240 250 260 270 280 pF1KB5 CEKTFRDKNTLKDHMRKKQHRKINPKNREYDRFYVINYLELGKSWEEVQLEDDRELLDHQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 CEKTFRDKNTLKDHMRKKQHRKINPKNREYDRFYVINYLELGKSWEEVQLEDDRELLDHQ 160 170 180 190 200 210 290 300 310 320 330 340 pF1KB5 EDDWSDWEEHPASAVCLFCEKQAETIEKLYVHMEDAHEFDLLKIKSELGLNFYQQVKLVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 EDDWSDWEEHPASAVCLFCEKQAETIEKLYVHMEDAHEFDLLKIKSELGLNFYQQVKLVN 220 230 240 250 260 270 350 360 370 380 390 400 pF1KB5 FIRRQVHQCRCYGCHVKFKSKADLRTHMEETKHTSLLPDRKTWDQLEYYFPTYENDTLLC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 FIRRQVHQCRCYGCHVKFKSKADLRTHMEETKHTSLLPDRKTWDQLEYYFPTYENDTLLC 280 290 300 310 320 330 410 420 430 440 450 pF1KB5 TLSDSESDLTAQEQNENVPIISEDTSKLYALKQSSILNQLLL :::::::::::::::::::::::::::::::::::::::::: XP_011 TLSDSESDLTAQEQNENVPIISEDTSKLYALKQSSILNQLLL 340 350 360 370 >>XP_016867209 (OMIM: 605465) PREDICTED: zinc finger pro (332 aa) initn: 2216 init1: 2216 opt: 2216 Z-score: 2088.8 bits: 395.3 E(85289): 1.3e-109 Smith-Waterman score: 2216; 100.0% identity (100.0% similar) in 323 aa overlap (128-450:10-332) 100 110 120 130 140 150 pF1KB5 RYILYWRKRFTEQPITDFCSVIRINSTAPFEEQENYFLLCDVLPEDRILREELQKQRLRE :::::::::::::::::::::::::::::: XP_016 MSSWLLISKEEQENYFLLCDVLPEDRILREELQKQRLRE 10 20 30 160 170 180 190 200 210 pF1KB5 ILEQQQQERNDTNFHGVCMFCNEEFLGNRSVILNHMAREHAFNIGLPDNIVNCNEFLCTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ILEQQQQERNDTNFHGVCMFCNEEFLGNRSVILNHMAREHAFNIGLPDNIVNCNEFLCTL 40 50 60 70 80 90 220 230 240 250 260 270 pF1KB5 QKKLDNLQCLYCEKTFRDKNTLKDHMRKKQHRKINPKNREYDRFYVINYLELGKSWEEVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 QKKLDNLQCLYCEKTFRDKNTLKDHMRKKQHRKINPKNREYDRFYVINYLELGKSWEEVQ 100 110 120 130 140 150 280 290 300 310 320 330 pF1KB5 LEDDRELLDHQEDDWSDWEEHPASAVCLFCEKQAETIEKLYVHMEDAHEFDLLKIKSELG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LEDDRELLDHQEDDWSDWEEHPASAVCLFCEKQAETIEKLYVHMEDAHEFDLLKIKSELG 160 170 180 190 200 210 340 350 360 370 380 390 pF1KB5 LNFYQQVKLVNFIRRQVHQCRCYGCHVKFKSKADLRTHMEETKHTSLLPDRKTWDQLEYY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LNFYQQVKLVNFIRRQVHQCRCYGCHVKFKSKADLRTHMEETKHTSLLPDRKTWDQLEYY 220 230 240 250 260 270 400 410 420 430 440 450 pF1KB5 FPTYENDTLLCTLSDSESDLTAQEQNENVPIISEDTSKLYALKQSSILNQLLL ::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 FPTYENDTLLCTLSDSESDLTAQEQNENVPIISEDTSKLYALKQSSILNQLLL 280 290 300 310 320 330 >>XP_005250186 (OMIM: 605465) PREDICTED: zinc finger pro (332 aa) initn: 2216 init1: 2216 opt: 2216 Z-score: 2088.8 bits: 395.3 E(85289): 1.3e-109 Smith-Waterman score: 2216; 100.0% identity (100.0% similar) in 323 aa overlap (128-450:10-332) 100 110 120 130 140 150 pF1KB5 RYILYWRKRFTEQPITDFCSVIRINSTAPFEEQENYFLLCDVLPEDRILREELQKQRLRE :::::::::::::::::::::::::::::: XP_005 MSSWLLISKEEQENYFLLCDVLPEDRILREELQKQRLRE 10 20 30 160 170 180 190 200 210 pF1KB5 ILEQQQQERNDTNFHGVCMFCNEEFLGNRSVILNHMAREHAFNIGLPDNIVNCNEFLCTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 ILEQQQQERNDTNFHGVCMFCNEEFLGNRSVILNHMAREHAFNIGLPDNIVNCNEFLCTL 40 50 60 70 80 90 220 230 240 250 260 270 pF1KB5 QKKLDNLQCLYCEKTFRDKNTLKDHMRKKQHRKINPKNREYDRFYVINYLELGKSWEEVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 QKKLDNLQCLYCEKTFRDKNTLKDHMRKKQHRKINPKNREYDRFYVINYLELGKSWEEVQ 100 110 120 130 140 150 280 290 300 310 320 330 pF1KB5 LEDDRELLDHQEDDWSDWEEHPASAVCLFCEKQAETIEKLYVHMEDAHEFDLLKIKSELG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 LEDDRELLDHQEDDWSDWEEHPASAVCLFCEKQAETIEKLYVHMEDAHEFDLLKIKSELG 160 170 180 190 200 210 340 350 360 370 380 390 pF1KB5 LNFYQQVKLVNFIRRQVHQCRCYGCHVKFKSKADLRTHMEETKHTSLLPDRKTWDQLEYY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 LNFYQQVKLVNFIRRQVHQCRCYGCHVKFKSKADLRTHMEETKHTSLLPDRKTWDQLEYY 220 230 240 250 260 270 400 410 420 430 440 450 pF1KB5 FPTYENDTLLCTLSDSESDLTAQEQNENVPIISEDTSKLYALKQSSILNQLLL ::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 FPTYENDTLLCTLSDSESDLTAQEQNENVPIISEDTSKLYALKQSSILNQLLL 280 290 300 310 320 330 450 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 18:06:14 2016 done: Mon Nov 7 18:06:15 2016 Total Scan time: 8.210 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]