FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3296, 774 aa 1>>>pF1KE3296 774 - 774 aa - 774 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.7926+/-0.000404; mu= 10.5985+/- 0.025 mean_var=187.1240+/-39.465, 0's: 0 Z-trim(117.6): 32 B-trim: 977 in 1/56 Lambda= 0.093758 statistics sampled from 29767 (29799) to 29767 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.696), E-opt: 0.2 (0.349), width: 16 Scan time: 12.190 The best scores are: opt bits E(85289) XP_016878880 (OMIM: 614151) PREDICTED: E3 ubiquiti ( 774) 5202 716.7 8.9e-206 XP_005256078 (OMIM: 614151) PREDICTED: E3 ubiquiti ( 774) 5202 716.7 8.9e-206 XP_011521493 (OMIM: 614151) PREDICTED: E3 ubiquiti ( 774) 5202 716.7 8.9e-206 NP_060594 (OMIM: 614151) E3 ubiquitin-protein liga ( 774) 5202 716.7 8.9e-206 XP_005256079 (OMIM: 614151) PREDICTED: E3 ubiquiti ( 774) 5202 716.7 8.9e-206 XP_016878881 (OMIM: 614151) PREDICTED: E3 ubiquiti ( 715) 3471 482.6 2.5e-135 XP_006721291 (OMIM: 614151) PREDICTED: E3 ubiquiti ( 715) 3471 482.6 2.5e-135 >>XP_016878880 (OMIM: 614151) PREDICTED: E3 ubiquitin-pr (774 aa) initn: 5202 init1: 5202 opt: 5202 Z-score: 3815.4 bits: 716.7 E(85289): 8.9e-206 Smith-Waterman score: 5202; 99.7% identity (100.0% similar) in 774 aa overlap (1-774:1-774) 10 20 30 40 50 60 pF1KE3 MAHEAMEYDVQVQLNHAEQQPAPAGMASSQGGPALLQPVPADVVSSQGVPSILQPAPAEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MAHEAMEYDVQVQLNHAEQQPAPAGMASSQGGPALLQPVPADVVSSQGVPSILQPAPAEV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 ISSQATPPLLQPAPQLSVDLTEVEVLGEDNVENINPRTSEQHRQGSDGNHTIPASSLHSM :::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::: XP_016 ISSQATPPLLQPAPQLSVDLTEVEVLGEDTVENINPRTSEQHRQGSDGNHTIPASSLHSM 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 TNFISGLQRLHGMLEFLRPSSSNHSVGPMRTRRRVSASRRARAGGSQRTDSARLRAPLDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TNFISGLQRLHGMLEFLRPSSSNHSVGPMRTRRRVSASRRARAGGSQRTDSARLRAPLDA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 YFQVSRTQPDLPATTYDSETRNPVSEELQVSSSSDSDSDSSAEYGGVVDQAEESGAVILE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 YFQVSRTQPDLPATTYDSETRNPVSEELQVSSSSDSDSDSSAEYGGVVDQAEESGAVILE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 EQLAGVSAEQEVTCIDGGKTLPKQPSPQKSEPLLPSASMDEEEGDTCTICLEQWTNAGDH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 EQLAGVSAEQEVTCIDGGKTLPKQPSPQKSEPLLPSASMDEEEGDTCTICLEQWTNAGDH 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 RLSALRCGHLFGYRCISTWLKGQVRKCPQCNKKARHSDIVVLYARTLRALDTSEQERMKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RLSALRCGHLFGYRCISTWLKGQVRKCPQCNKKARHSDIVVLYARTLRALDTSEQERMKS 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 SLLKEQMLRKQAELESAQCRLQLQVLTDKCTRLQRRVQDLQKLTSHQSQNLQQPRGSQAW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SLLKEQMLRKQAELESAQCRLQLQVLTDKCTRLQRRVQDLQKLTSHQSQNLQQPRGSQAW 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE3 VLSCSPSSQGQHKHKYHFQKTFTVSQAGNCRIMAYCDALSCLVISQPSPQASFLPGFGVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VLSCSPSSQGQHKHKYHFQKTFTVSQAGNCRIMAYCDALSCLVISQPSPQASFLPGFGVK 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE3 MLSTANMKSSQYIPMHGKQIRGLAFSSYLRGLLLSASLDNTIKLTSLETNTVVQTYNAGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MLSTANMKSSQYIPMHGKQIRGLAFSSYLRGLLLSASLDNTIKLTSLETNTVVQTYNAGR 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE3 PVWSCCWCLDEANYIYAGLANGSVLVYDVRNTSSHVQELVAQKARCPLVSLSYMPRAASA :::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::: XP_016 PVWSCCWCLDEANYIYAGLANGSILVYDVRNTSSHVQELVAQKARCPLVSLSYMPRAASA 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE3 AFPYGGVLAGTLEDASFWEQKMDFSHWPHVLPLEPGGCIDFQTENSSRHCLVTYRPDKNH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 AFPYGGVLAGTLEDASFWEQKMDFSHWPHVLPLEPGGCIDFQTENSSRHCLVTYRPDKNH 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE3 TTIRSVLMEMSYRLDDTGNPICSCQPVHTFFGGPTCKLLTKNAIFQSPENDGNILVCTGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TTIRSVLMEMSYRLDDTGNPICSCQPVHTFFGGPTCKLLTKNAIFQSPENDGNILVCTGD 670 680 690 700 710 720 730 740 750 760 770 pF1KE3 EAANSALLWDAASGSLLQDLQTDQPVLDICPFEVNRNSYLATLTEKMVHIYKWE :::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 EAANSALLWDAASGSLLQDLQTDQPVLDICPFEVNRNSYLATLTEKMVHIYKWE 730 740 750 760 770 >>XP_005256078 (OMIM: 614151) PREDICTED: E3 ubiquitin-pr (774 aa) initn: 5202 init1: 5202 opt: 5202 Z-score: 3815.4 bits: 716.7 E(85289): 8.9e-206 Smith-Waterman score: 5202; 99.7% identity (100.0% similar) in 774 aa overlap (1-774:1-774) 10 20 30 40 50 60 pF1KE3 MAHEAMEYDVQVQLNHAEQQPAPAGMASSQGGPALLQPVPADVVSSQGVPSILQPAPAEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MAHEAMEYDVQVQLNHAEQQPAPAGMASSQGGPALLQPVPADVVSSQGVPSILQPAPAEV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 ISSQATPPLLQPAPQLSVDLTEVEVLGEDNVENINPRTSEQHRQGSDGNHTIPASSLHSM :::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::: XP_005 ISSQATPPLLQPAPQLSVDLTEVEVLGEDTVENINPRTSEQHRQGSDGNHTIPASSLHSM 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 TNFISGLQRLHGMLEFLRPSSSNHSVGPMRTRRRVSASRRARAGGSQRTDSARLRAPLDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 TNFISGLQRLHGMLEFLRPSSSNHSVGPMRTRRRVSASRRARAGGSQRTDSARLRAPLDA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 YFQVSRTQPDLPATTYDSETRNPVSEELQVSSSSDSDSDSSAEYGGVVDQAEESGAVILE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 YFQVSRTQPDLPATTYDSETRNPVSEELQVSSSSDSDSDSSAEYGGVVDQAEESGAVILE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 EQLAGVSAEQEVTCIDGGKTLPKQPSPQKSEPLLPSASMDEEEGDTCTICLEQWTNAGDH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 EQLAGVSAEQEVTCIDGGKTLPKQPSPQKSEPLLPSASMDEEEGDTCTICLEQWTNAGDH 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 RLSALRCGHLFGYRCISTWLKGQVRKCPQCNKKARHSDIVVLYARTLRALDTSEQERMKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 RLSALRCGHLFGYRCISTWLKGQVRKCPQCNKKARHSDIVVLYARTLRALDTSEQERMKS 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 SLLKEQMLRKQAELESAQCRLQLQVLTDKCTRLQRRVQDLQKLTSHQSQNLQQPRGSQAW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 SLLKEQMLRKQAELESAQCRLQLQVLTDKCTRLQRRVQDLQKLTSHQSQNLQQPRGSQAW 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE3 VLSCSPSSQGQHKHKYHFQKTFTVSQAGNCRIMAYCDALSCLVISQPSPQASFLPGFGVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 VLSCSPSSQGQHKHKYHFQKTFTVSQAGNCRIMAYCDALSCLVISQPSPQASFLPGFGVK 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE3 MLSTANMKSSQYIPMHGKQIRGLAFSSYLRGLLLSASLDNTIKLTSLETNTVVQTYNAGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MLSTANMKSSQYIPMHGKQIRGLAFSSYLRGLLLSASLDNTIKLTSLETNTVVQTYNAGR 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE3 PVWSCCWCLDEANYIYAGLANGSVLVYDVRNTSSHVQELVAQKARCPLVSLSYMPRAASA :::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::: XP_005 PVWSCCWCLDEANYIYAGLANGSILVYDVRNTSSHVQELVAQKARCPLVSLSYMPRAASA 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE3 AFPYGGVLAGTLEDASFWEQKMDFSHWPHVLPLEPGGCIDFQTENSSRHCLVTYRPDKNH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 AFPYGGVLAGTLEDASFWEQKMDFSHWPHVLPLEPGGCIDFQTENSSRHCLVTYRPDKNH 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE3 TTIRSVLMEMSYRLDDTGNPICSCQPVHTFFGGPTCKLLTKNAIFQSPENDGNILVCTGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 TTIRSVLMEMSYRLDDTGNPICSCQPVHTFFGGPTCKLLTKNAIFQSPENDGNILVCTGD 670 680 690 700 710 720 730 740 750 760 770 pF1KE3 EAANSALLWDAASGSLLQDLQTDQPVLDICPFEVNRNSYLATLTEKMVHIYKWE :::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 EAANSALLWDAASGSLLQDLQTDQPVLDICPFEVNRNSYLATLTEKMVHIYKWE 730 740 750 760 770 >>XP_011521493 (OMIM: 614151) PREDICTED: E3 ubiquitin-pr (774 aa) initn: 5202 init1: 5202 opt: 5202 Z-score: 3815.4 bits: 716.7 E(85289): 8.9e-206 Smith-Waterman score: 5202; 99.7% identity (100.0% similar) in 774 aa overlap (1-774:1-774) 10 20 30 40 50 60 pF1KE3 MAHEAMEYDVQVQLNHAEQQPAPAGMASSQGGPALLQPVPADVVSSQGVPSILQPAPAEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MAHEAMEYDVQVQLNHAEQQPAPAGMASSQGGPALLQPVPADVVSSQGVPSILQPAPAEV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 ISSQATPPLLQPAPQLSVDLTEVEVLGEDNVENINPRTSEQHRQGSDGNHTIPASSLHSM :::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::: XP_011 ISSQATPPLLQPAPQLSVDLTEVEVLGEDTVENINPRTSEQHRQGSDGNHTIPASSLHSM 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 TNFISGLQRLHGMLEFLRPSSSNHSVGPMRTRRRVSASRRARAGGSQRTDSARLRAPLDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 TNFISGLQRLHGMLEFLRPSSSNHSVGPMRTRRRVSASRRARAGGSQRTDSARLRAPLDA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 YFQVSRTQPDLPATTYDSETRNPVSEELQVSSSSDSDSDSSAEYGGVVDQAEESGAVILE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 YFQVSRTQPDLPATTYDSETRNPVSEELQVSSSSDSDSDSSAEYGGVVDQAEESGAVILE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 EQLAGVSAEQEVTCIDGGKTLPKQPSPQKSEPLLPSASMDEEEGDTCTICLEQWTNAGDH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 EQLAGVSAEQEVTCIDGGKTLPKQPSPQKSEPLLPSASMDEEEGDTCTICLEQWTNAGDH 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 RLSALRCGHLFGYRCISTWLKGQVRKCPQCNKKARHSDIVVLYARTLRALDTSEQERMKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 RLSALRCGHLFGYRCISTWLKGQVRKCPQCNKKARHSDIVVLYARTLRALDTSEQERMKS 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 SLLKEQMLRKQAELESAQCRLQLQVLTDKCTRLQRRVQDLQKLTSHQSQNLQQPRGSQAW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 SLLKEQMLRKQAELESAQCRLQLQVLTDKCTRLQRRVQDLQKLTSHQSQNLQQPRGSQAW 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE3 VLSCSPSSQGQHKHKYHFQKTFTVSQAGNCRIMAYCDALSCLVISQPSPQASFLPGFGVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 VLSCSPSSQGQHKHKYHFQKTFTVSQAGNCRIMAYCDALSCLVISQPSPQASFLPGFGVK 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE3 MLSTANMKSSQYIPMHGKQIRGLAFSSYLRGLLLSASLDNTIKLTSLETNTVVQTYNAGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MLSTANMKSSQYIPMHGKQIRGLAFSSYLRGLLLSASLDNTIKLTSLETNTVVQTYNAGR 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE3 PVWSCCWCLDEANYIYAGLANGSVLVYDVRNTSSHVQELVAQKARCPLVSLSYMPRAASA :::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::: XP_011 PVWSCCWCLDEANYIYAGLANGSILVYDVRNTSSHVQELVAQKARCPLVSLSYMPRAASA 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE3 AFPYGGVLAGTLEDASFWEQKMDFSHWPHVLPLEPGGCIDFQTENSSRHCLVTYRPDKNH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 AFPYGGVLAGTLEDASFWEQKMDFSHWPHVLPLEPGGCIDFQTENSSRHCLVTYRPDKNH 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE3 TTIRSVLMEMSYRLDDTGNPICSCQPVHTFFGGPTCKLLTKNAIFQSPENDGNILVCTGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 TTIRSVLMEMSYRLDDTGNPICSCQPVHTFFGGPTCKLLTKNAIFQSPENDGNILVCTGD 670 680 690 700 710 720 730 740 750 760 770 pF1KE3 EAANSALLWDAASGSLLQDLQTDQPVLDICPFEVNRNSYLATLTEKMVHIYKWE :::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 EAANSALLWDAASGSLLQDLQTDQPVLDICPFEVNRNSYLATLTEKMVHIYKWE 730 740 750 760 770 >>NP_060594 (OMIM: 614151) E3 ubiquitin-protein ligase R (774 aa) initn: 5202 init1: 5202 opt: 5202 Z-score: 3815.4 bits: 716.7 E(85289): 8.9e-206 Smith-Waterman score: 5202; 99.7% identity (100.0% similar) in 774 aa overlap (1-774:1-774) 10 20 30 40 50 60 pF1KE3 MAHEAMEYDVQVQLNHAEQQPAPAGMASSQGGPALLQPVPADVVSSQGVPSILQPAPAEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 MAHEAMEYDVQVQLNHAEQQPAPAGMASSQGGPALLQPVPADVVSSQGVPSILQPAPAEV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 ISSQATPPLLQPAPQLSVDLTEVEVLGEDNVENINPRTSEQHRQGSDGNHTIPASSLHSM :::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::: NP_060 ISSQATPPLLQPAPQLSVDLTEVEVLGEDTVENINPRTSEQHRQGSDGNHTIPASSLHSM 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 TNFISGLQRLHGMLEFLRPSSSNHSVGPMRTRRRVSASRRARAGGSQRTDSARLRAPLDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 TNFISGLQRLHGMLEFLRPSSSNHSVGPMRTRRRVSASRRARAGGSQRTDSARLRAPLDA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 YFQVSRTQPDLPATTYDSETRNPVSEELQVSSSSDSDSDSSAEYGGVVDQAEESGAVILE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 YFQVSRTQPDLPATTYDSETRNPVSEELQVSSSSDSDSDSSAEYGGVVDQAEESGAVILE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 EQLAGVSAEQEVTCIDGGKTLPKQPSPQKSEPLLPSASMDEEEGDTCTICLEQWTNAGDH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 EQLAGVSAEQEVTCIDGGKTLPKQPSPQKSEPLLPSASMDEEEGDTCTICLEQWTNAGDH 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 RLSALRCGHLFGYRCISTWLKGQVRKCPQCNKKARHSDIVVLYARTLRALDTSEQERMKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 RLSALRCGHLFGYRCISTWLKGQVRKCPQCNKKARHSDIVVLYARTLRALDTSEQERMKS 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 SLLKEQMLRKQAELESAQCRLQLQVLTDKCTRLQRRVQDLQKLTSHQSQNLQQPRGSQAW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 SLLKEQMLRKQAELESAQCRLQLQVLTDKCTRLQRRVQDLQKLTSHQSQNLQQPRGSQAW 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE3 VLSCSPSSQGQHKHKYHFQKTFTVSQAGNCRIMAYCDALSCLVISQPSPQASFLPGFGVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 VLSCSPSSQGQHKHKYHFQKTFTVSQAGNCRIMAYCDALSCLVISQPSPQASFLPGFGVK 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE3 MLSTANMKSSQYIPMHGKQIRGLAFSSYLRGLLLSASLDNTIKLTSLETNTVVQTYNAGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 MLSTANMKSSQYIPMHGKQIRGLAFSSYLRGLLLSASLDNTIKLTSLETNTVVQTYNAGR 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE3 PVWSCCWCLDEANYIYAGLANGSVLVYDVRNTSSHVQELVAQKARCPLVSLSYMPRAASA :::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::: NP_060 PVWSCCWCLDEANYIYAGLANGSILVYDVRNTSSHVQELVAQKARCPLVSLSYMPRAASA 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE3 AFPYGGVLAGTLEDASFWEQKMDFSHWPHVLPLEPGGCIDFQTENSSRHCLVTYRPDKNH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 AFPYGGVLAGTLEDASFWEQKMDFSHWPHVLPLEPGGCIDFQTENSSRHCLVTYRPDKNH 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE3 TTIRSVLMEMSYRLDDTGNPICSCQPVHTFFGGPTCKLLTKNAIFQSPENDGNILVCTGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 TTIRSVLMEMSYRLDDTGNPICSCQPVHTFFGGPTCKLLTKNAIFQSPENDGNILVCTGD 670 680 690 700 710 720 730 740 750 760 770 pF1KE3 EAANSALLWDAASGSLLQDLQTDQPVLDICPFEVNRNSYLATLTEKMVHIYKWE :::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 EAANSALLWDAASGSLLQDLQTDQPVLDICPFEVNRNSYLATLTEKMVHIYKWE 730 740 750 760 770 >>XP_005256079 (OMIM: 614151) PREDICTED: E3 ubiquitin-pr (774 aa) initn: 5202 init1: 5202 opt: 5202 Z-score: 3815.4 bits: 716.7 E(85289): 8.9e-206 Smith-Waterman score: 5202; 99.7% identity (100.0% similar) in 774 aa overlap (1-774:1-774) 10 20 30 40 50 60 pF1KE3 MAHEAMEYDVQVQLNHAEQQPAPAGMASSQGGPALLQPVPADVVSSQGVPSILQPAPAEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MAHEAMEYDVQVQLNHAEQQPAPAGMASSQGGPALLQPVPADVVSSQGVPSILQPAPAEV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 ISSQATPPLLQPAPQLSVDLTEVEVLGEDNVENINPRTSEQHRQGSDGNHTIPASSLHSM :::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::: XP_005 ISSQATPPLLQPAPQLSVDLTEVEVLGEDTVENINPRTSEQHRQGSDGNHTIPASSLHSM 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 TNFISGLQRLHGMLEFLRPSSSNHSVGPMRTRRRVSASRRARAGGSQRTDSARLRAPLDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 TNFISGLQRLHGMLEFLRPSSSNHSVGPMRTRRRVSASRRARAGGSQRTDSARLRAPLDA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 YFQVSRTQPDLPATTYDSETRNPVSEELQVSSSSDSDSDSSAEYGGVVDQAEESGAVILE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 YFQVSRTQPDLPATTYDSETRNPVSEELQVSSSSDSDSDSSAEYGGVVDQAEESGAVILE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 EQLAGVSAEQEVTCIDGGKTLPKQPSPQKSEPLLPSASMDEEEGDTCTICLEQWTNAGDH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 EQLAGVSAEQEVTCIDGGKTLPKQPSPQKSEPLLPSASMDEEEGDTCTICLEQWTNAGDH 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 RLSALRCGHLFGYRCISTWLKGQVRKCPQCNKKARHSDIVVLYARTLRALDTSEQERMKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 RLSALRCGHLFGYRCISTWLKGQVRKCPQCNKKARHSDIVVLYARTLRALDTSEQERMKS 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 SLLKEQMLRKQAELESAQCRLQLQVLTDKCTRLQRRVQDLQKLTSHQSQNLQQPRGSQAW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 SLLKEQMLRKQAELESAQCRLQLQVLTDKCTRLQRRVQDLQKLTSHQSQNLQQPRGSQAW 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE3 VLSCSPSSQGQHKHKYHFQKTFTVSQAGNCRIMAYCDALSCLVISQPSPQASFLPGFGVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 VLSCSPSSQGQHKHKYHFQKTFTVSQAGNCRIMAYCDALSCLVISQPSPQASFLPGFGVK 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE3 MLSTANMKSSQYIPMHGKQIRGLAFSSYLRGLLLSASLDNTIKLTSLETNTVVQTYNAGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MLSTANMKSSQYIPMHGKQIRGLAFSSYLRGLLLSASLDNTIKLTSLETNTVVQTYNAGR 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE3 PVWSCCWCLDEANYIYAGLANGSVLVYDVRNTSSHVQELVAQKARCPLVSLSYMPRAASA :::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::: XP_005 PVWSCCWCLDEANYIYAGLANGSILVYDVRNTSSHVQELVAQKARCPLVSLSYMPRAASA 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE3 AFPYGGVLAGTLEDASFWEQKMDFSHWPHVLPLEPGGCIDFQTENSSRHCLVTYRPDKNH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 AFPYGGVLAGTLEDASFWEQKMDFSHWPHVLPLEPGGCIDFQTENSSRHCLVTYRPDKNH 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE3 TTIRSVLMEMSYRLDDTGNPICSCQPVHTFFGGPTCKLLTKNAIFQSPENDGNILVCTGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 TTIRSVLMEMSYRLDDTGNPICSCQPVHTFFGGPTCKLLTKNAIFQSPENDGNILVCTGD 670 680 690 700 710 720 730 740 750 760 770 pF1KE3 EAANSALLWDAASGSLLQDLQTDQPVLDICPFEVNRNSYLATLTEKMVHIYKWE :::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 EAANSALLWDAASGSLLQDLQTDQPVLDICPFEVNRNSYLATLTEKMVHIYKWE 730 740 750 760 770 >>XP_016878881 (OMIM: 614151) PREDICTED: E3 ubiquitin-pr (715 aa) initn: 4789 init1: 3471 opt: 3471 Z-score: 2550.4 bits: 482.6 E(85289): 2.5e-135 Smith-Waterman score: 4675; 92.2% identity (92.4% similar) in 774 aa overlap (1-774:1-715) 10 20 30 40 50 60 pF1KE3 MAHEAMEYDVQVQLNHAEQQPAPAGMASSQGGPALLQPVPADVVSSQGVPSILQPAPAEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MAHEAMEYDVQVQLNHAEQQPAPAGMASSQGGPALLQPVPADVVSSQGVPSILQPAPAEV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 ISSQATPPLLQPAPQLSVDLTEVEVLGEDNVENINPRTSEQHRQGSDGNHTIPASSLHSM :::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::: XP_016 ISSQATPPLLQPAPQLSVDLTEVEVLGEDTVENINPRTSEQHRQGSDGNHTIPASSLHSM 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 TNFISGLQRLHGMLEFLRPSSSNHSVGPMRTRRRVSASRRARAGGSQRTDSARLRAPLDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TNFISGLQRLHGMLEFLRPSSSNHSVGPMRTRRRVSASRRARAGGSQRTDSARLRAPLDA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 YFQVSRTQPDLPATTYDSETRNPVSEELQVSSSSDSDSDSSAEYGGVVDQAEESGAVILE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 YFQVSRTQPDLPATTYDSETRNPVSEELQVSSSSDSDSDSSAEYGGVVDQAEESGAVILE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 EQLAGVSAEQEVTCIDGGKTLPKQPSPQKSEPLLPSASMDEEEGDTCTICLEQWTNAGDH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 EQLAGVSAEQEVTCIDGGKTLPKQPSPQKSEPLLPSASMDEEEGDTCTICLEQWTNAGDH 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 RLSALRCGHLFGYRCISTWLKGQVRKCPQCNKKARHSDIVVLYARTLRALDTSEQERMKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RLSALRCGHLFGYRCISTWLKGQVRKCPQCNKKARHSDIVVLYARTLRALDTSEQERMKS 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 SLLKEQMLRKQAELESAQCRLQLQVLTDKCTRLQRRVQDLQKLTSHQSQNLQQPRGSQAW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SLLKEQMLRKQAELESAQCRLQLQVLTDKCTRLQRRVQDLQKLTSHQSQNLQQPRGSQAW 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE3 VLSCSPSSQGQHKHKYHFQKTFTVSQAGNCRIMAYCDALSCLVISQPSPQASFLPGFGVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VLSCSPSSQGQHKHKYHFQKTFTVSQAGNCRIMAYCDALSCLVISQPSPQASFLPGFGVK 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE3 MLSTANMKSSQYIPMHGKQIRGLAFSSYLRGLLLSASLDNTIKLTSLETNTVVQTYNAGR ::::::::::::::::::::::::::::::::::::::::::::: XP_016 MLSTANMKSSQYIPMHGKQIRGLAFSSYLRGLLLSASLDNTIKLT--------------- 490 500 510 520 550 560 570 580 590 600 pF1KE3 PVWSCCWCLDEANYIYAGLANGSVLVYDVRNTSSHVQELVAQKARCPLVSLSYMPRAASA :::::::::::::::: XP_016 --------------------------------------------RCPLVSLSYMPRAASA 530 540 610 620 630 640 650 660 pF1KE3 AFPYGGVLAGTLEDASFWEQKMDFSHWPHVLPLEPGGCIDFQTENSSRHCLVTYRPDKNH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 AFPYGGVLAGTLEDASFWEQKMDFSHWPHVLPLEPGGCIDFQTENSSRHCLVTYRPDKNH 550 560 570 580 590 600 670 680 690 700 710 720 pF1KE3 TTIRSVLMEMSYRLDDTGNPICSCQPVHTFFGGPTCKLLTKNAIFQSPENDGNILVCTGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TTIRSVLMEMSYRLDDTGNPICSCQPVHTFFGGPTCKLLTKNAIFQSPENDGNILVCTGD 610 620 630 640 650 660 730 740 750 760 770 pF1KE3 EAANSALLWDAASGSLLQDLQTDQPVLDICPFEVNRNSYLATLTEKMVHIYKWE :::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 EAANSALLWDAASGSLLQDLQTDQPVLDICPFEVNRNSYLATLTEKMVHIYKWE 670 680 690 700 710 >>XP_006721291 (OMIM: 614151) PREDICTED: E3 ubiquitin-pr (715 aa) initn: 4789 init1: 3471 opt: 3471 Z-score: 2550.4 bits: 482.6 E(85289): 2.5e-135 Smith-Waterman score: 4675; 92.2% identity (92.4% similar) in 774 aa overlap (1-774:1-715) 10 20 30 40 50 60 pF1KE3 MAHEAMEYDVQVQLNHAEQQPAPAGMASSQGGPALLQPVPADVVSSQGVPSILQPAPAEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 MAHEAMEYDVQVQLNHAEQQPAPAGMASSQGGPALLQPVPADVVSSQGVPSILQPAPAEV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 ISSQATPPLLQPAPQLSVDLTEVEVLGEDNVENINPRTSEQHRQGSDGNHTIPASSLHSM :::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::: XP_006 ISSQATPPLLQPAPQLSVDLTEVEVLGEDTVENINPRTSEQHRQGSDGNHTIPASSLHSM 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 TNFISGLQRLHGMLEFLRPSSSNHSVGPMRTRRRVSASRRARAGGSQRTDSARLRAPLDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 TNFISGLQRLHGMLEFLRPSSSNHSVGPMRTRRRVSASRRARAGGSQRTDSARLRAPLDA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 YFQVSRTQPDLPATTYDSETRNPVSEELQVSSSSDSDSDSSAEYGGVVDQAEESGAVILE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 YFQVSRTQPDLPATTYDSETRNPVSEELQVSSSSDSDSDSSAEYGGVVDQAEESGAVILE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 EQLAGVSAEQEVTCIDGGKTLPKQPSPQKSEPLLPSASMDEEEGDTCTICLEQWTNAGDH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 EQLAGVSAEQEVTCIDGGKTLPKQPSPQKSEPLLPSASMDEEEGDTCTICLEQWTNAGDH 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 RLSALRCGHLFGYRCISTWLKGQVRKCPQCNKKARHSDIVVLYARTLRALDTSEQERMKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 RLSALRCGHLFGYRCISTWLKGQVRKCPQCNKKARHSDIVVLYARTLRALDTSEQERMKS 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 SLLKEQMLRKQAELESAQCRLQLQVLTDKCTRLQRRVQDLQKLTSHQSQNLQQPRGSQAW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 SLLKEQMLRKQAELESAQCRLQLQVLTDKCTRLQRRVQDLQKLTSHQSQNLQQPRGSQAW 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE3 VLSCSPSSQGQHKHKYHFQKTFTVSQAGNCRIMAYCDALSCLVISQPSPQASFLPGFGVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 VLSCSPSSQGQHKHKYHFQKTFTVSQAGNCRIMAYCDALSCLVISQPSPQASFLPGFGVK 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE3 MLSTANMKSSQYIPMHGKQIRGLAFSSYLRGLLLSASLDNTIKLTSLETNTVVQTYNAGR ::::::::::::::::::::::::::::::::::::::::::::: XP_006 MLSTANMKSSQYIPMHGKQIRGLAFSSYLRGLLLSASLDNTIKLT--------------- 490 500 510 520 550 560 570 580 590 600 pF1KE3 PVWSCCWCLDEANYIYAGLANGSVLVYDVRNTSSHVQELVAQKARCPLVSLSYMPRAASA :::::::::::::::: XP_006 --------------------------------------------RCPLVSLSYMPRAASA 530 540 610 620 630 640 650 660 pF1KE3 AFPYGGVLAGTLEDASFWEQKMDFSHWPHVLPLEPGGCIDFQTENSSRHCLVTYRPDKNH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 AFPYGGVLAGTLEDASFWEQKMDFSHWPHVLPLEPGGCIDFQTENSSRHCLVTYRPDKNH 550 560 570 580 590 600 670 680 690 700 710 720 pF1KE3 TTIRSVLMEMSYRLDDTGNPICSCQPVHTFFGGPTCKLLTKNAIFQSPENDGNILVCTGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 TTIRSVLMEMSYRLDDTGNPICSCQPVHTFFGGPTCKLLTKNAIFQSPENDGNILVCTGD 610 620 630 640 650 660 730 740 750 760 770 pF1KE3 EAANSALLWDAASGSLLQDLQTDQPVLDICPFEVNRNSYLATLTEKMVHIYKWE :::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 EAANSALLWDAASGSLLQDLQTDQPVLDICPFEVNRNSYLATLTEKMVHIYKWE 670 680 690 700 710 774 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 18:05:36 2016 done: Mon Nov 7 18:05:37 2016 Total Scan time: 12.190 Total Display time: 0.160 Function used was FASTA [36.3.4 Apr, 2011]