FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE9431, 609 aa 1>>>pF1KE9431 609 - 609 aa - 609 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 10.4288+/-0.0011; mu= 0.0734+/- 0.067 mean_var=392.6637+/-81.967, 0's: 0 Z-trim(114.8): 6 B-trim: 149 in 1/52 Lambda= 0.064724 statistics sampled from 15387 (15390) to 15387 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.769), E-opt: 0.2 (0.473), width: 16 Scan time: 4.160 The best scores are: opt bits E(32554) CCDS64.1 GPR153 gene_id:387509|Hs108|chr1 ( 609) 4138 400.6 3.2e-111 CCDS8563.1 GPR162 gene_id:27239|Hs108|chr12 ( 588) 965 104.3 4.8e-22 >>CCDS64.1 GPR153 gene_id:387509|Hs108|chr1 (609 aa) initn: 4138 init1: 4138 opt: 4138 Z-score: 2110.3 bits: 400.6 E(32554): 3.2e-111 Smith-Waterman score: 4138; 99.8% identity (100.0% similar) in 609 aa overlap (1-609:1-609) 10 20 30 40 50 60 pF1KE9 MSDERRLPGSAVGWLVCGGLSLLANAWGILSVGAKQKKWKPLEFLLCTLAATHMLNVAVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 MSDERRLPGSAVGWLVCGGLSLLANAWGILSVGAKQKKWKPLEFLLCTLAATHMLNVAVP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE9 IATYSVVQLRRQRPDFEWNEGLCKVFVSTFYTLTLATCFSVTSLSYHRMWMVCWPVNYRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 IATYSVVQLRRQRPDFEWNEGLCKVFVSTFYTLTLATCFSVTSLSYHRMWMVCWPVNYRL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE9 SNAKKQAVHTVMGIWMVSFILSALPAVGWHDTSERFYTHGCRFIVAEIGLGFGVCFLLLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 SNAKKQAVHTVMGIWMVSFILSALPAVGWHDTSERFYTHGCRFIVAEIGLGFGVCFLLLV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE9 GGSVAMGVICTAIALFQTLAVQVGRQADHRAFTVPTIVVEDAQGKRRSSIDGSEPAKTSL ::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::: CCDS64 GGSVAMGVICTAIALFQTLAVQVGRQADRRAFTVPTIVVEDAQGKRRSSIDGSEPAKTSL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE9 QTTGLVTTIVFIYDCLMGFPVLVVSFSSLRADASAPWMALCVLWCSVAQALLLPVFLWAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 QTTGLVTTIVFIYDCLMGFPVLVVSFSSLRADASAPWMALCVLWCSVAQALLLPVFLWAC 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE9 DRYRADLKAVREKCMALMANDEESDDETSLEGGISPDLVLERSLDYGYGGDFVALDRMAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 DRYRADLKAVREKCMALMANDEESDDETSLEGGISPDLVLERSLDYGYGGDFVALDRMAK 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE9 YEISALEGGLPQLYPLRPLQEDKMQYLQVPPTRRFSHDDADVWAAVPLPAFLPRWGSGED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 YEISALEGGLPQLYPLRPLQEDKMQYLQVPPTRRFSHDDADVWAAVPLPAFLPRWGSGED 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE9 LAALAHLVLPAGPERRRASLLAFAEDAPPSRARRRSAESLLSLRPSALDSGPRGARDSPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 LAALAHLVLPAGPERRRASLLAFAEDAPPSRARRRSAESLLSLRPSALDSGPRGARDSPP 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE9 GSPRRRPGPGPRSASASLLPDAFALTAFECEPQALRRPPGPFPAAPAAPDGADPGEAPTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 GSPRRRPGPGPRSASASLLPDAFALTAFECEPQALRRPPGPFPAAPAAPDGADPGEAPTP 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE9 PSSAQRSPGPRPSAHSHAGSLRPGLSASWGEPGGLRAAGGGGSTSSFLSSPSESSGYATL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 PSSAQRSPGPRPSAHSHAGSLRPGLSASWGEPGGLRAAGGGGSTSSFLSSPSESSGYATL 550 560 570 580 590 600 pF1KE9 HSDSLGSAS ::::::::: CCDS64 HSDSLGSAS >>CCDS8563.1 GPR162 gene_id:27239|Hs108|chr12 (588 aa) initn: 1341 init1: 692 opt: 965 Z-score: 509.2 bits: 104.3 E(32554): 4.8e-22 Smith-Waterman score: 1606; 46.9% identity (70.8% similar) in 593 aa overlap (2-564:8-579) 10 20 30 40 50 pF1KE9 MSDERRLPGSAVGWLVCGGLSLLANAWGILSVGAKQKKWKPLEFLLCTLAATHM ..: : ..:..::.:: :.:::::: :::..:::.: ::::.::: ::.::. CCDS85 MARGGAGAEEASLRSNALSWLACGLLALLANAWIILSISAKQQKHKPLELLLCFLAGTHI 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE9 LNVAVPIATYSVVQLRRQ-RPDFEWNEGLCKVFVSTFYTLTLATCFSVTSLSYHRMWMVC : .:::..:..::::::: :..:::..:::::::.:::.:::::.:.:::::::::: CCDS85 LMAAVPLTTFAVVQLRRQASSDYDWNESICKVFVSTYYTLALATCFTVASLSYHRMWMVR 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE9 WPVNYRLSNAKKQAVHTVMGIWMVSFILSALPAVGWHDTSERFYTHGCRFIVAEIGLGFG ::::::::::::::.:.::::::::::::.::..:::...::.:..::.:::..:::::: CCDS85 WPVNYRLSNAKKQALHAVMGIWMVSFILSTLPSIGWHNNGERYYARGCQFIVSKIGLGFG 130 140 150 160 170 180 180 190 200 210 pF1KE9 VCFLLLVGGSVAMGVICTAIALFQTL---------AVQVGRQADHRA-----------FT ::: ::. :...::..:.::...::: : .:: . .: : CCDS85 VCFSLLLLGGIVMGLVCVAITFYQTLWARPRRARQARRVGGGGGTKAGGPGALGTRPAFE 190 200 210 220 230 240 220 230 240 250 260 270 pF1KE9 VPTIVVEDAQGKRRSSIDGSEPAKTSLQTTGLVTTIVFIYDCLMGFPVLVVSFSSLRADA ::.::::::.::::::.:::: ::::::.:.::..:::.:: : : :.::::: ::..:. CCDS85 VPAIVVEDARGKRRSSLDGSESAKTSLQVTNLVSAIVFLYDSLTGVPILVVSFFSLKSDS 250 260 270 280 290 300 280 290 300 310 320 330 pF1KE9 SAPWMALCVLWCSVAQALLLPVFLWACDRYRADLKAVREKCMALMANDEESDDETSLEGG . :::.: :::::.::.:::: :.:.:.:::::...: :.:.:.:. .:..::. :: CCDS85 APPWMVLAVLWCSMAQTLLLPSFIWSCERYRADVRTVWEQCVAIMS-EEDGDDD----GG 310 320 330 340 350 340 350 360 370 380 390 pF1KE9 ISPDLVLERSLDYGYGGDFVALDRMAKYEISALEGGLPQLYPLRPLQEDKMQYLQVPPTR : . : . .. .. : : .:.: ::. ...::::: .: CCDS85 -CDDYAEGRVCKVRFDANGATGPGSRDPAQVKLLPGRHMLFP--PLE--RVHYLQVPLSR 360 370 380 390 400 410 400 410 420 430 440 450 pF1KE9 RFSHDDADVWAAVPLP-AFLPRWGSGEDLAAL-AHLVLPAGPERRRASLLAFAEDAPPSR :.:::....... : .:: .:.:..:. .: :. .:: . .. . .. . CCDS85 RLSHDETNIFSTPREPGSFLHKWSSSDDIRVLPAQSRALGGPPEYLGQRHRLEDEEDEEE 420 430 440 450 460 470 460 470 480 490 500 510 pF1KE9 ARRRSAESLLSLRPSALDSGPRGARDSPPGSPRRRPGPGPRSASASLLPDAFALTAFECE :. . .: ::: . :.:: : : : :: ::: . . : : . CCDS85 AE---GGGLASLR-QFLESGVLG---SGGGPPR---GPGFFREEITTFIDETPLPSPTAS 480 490 500 510 520 520 530 540 550 560 pF1KE9 PQALRRPPGPFPAAP-----AAPDGADPGEAPTPPSSAQRSP--GPRPSAHSHAGSLRPG : : : :. .: ..:.. : : :...: : . ::.. .:: :: CCDS85 PGHSPRRPRPLGLSPRRLSLGSPESRAVG-LPLGLSAGRRCSLTGGEESARAWGGSWGPG 530 540 550 560 570 570 580 590 600 pF1KE9 LSASWGEPGGLRAAGGGGSTSSFLSSPSESSGYATLHSDSLGSAS CCDS85 NPIFPQLTL 580 609 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 17:57:41 2016 done: Mon Nov 7 17:57:42 2016 Total Scan time: 4.160 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]