FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3704, 1143 aa 1>>>pF1KE3704 1143 - 1143 aa - 1143 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.0125+/-0.00107; mu= 18.0063+/- 0.064 mean_var=65.2168+/-12.904, 0's: 0 Z-trim(102.4): 15 B-trim: 4 in 1/49 Lambda= 0.158816 statistics sampled from 6930 (6936) to 6930 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.573), E-opt: 0.2 (0.213), width: 16 Scan time: 3.840 The best scores are: opt bits E(32554) CCDS43686.1 NCAPG2 gene_id:54892|Hs108|chr7 (1143) 7523 1733.2 0 CCDS64816.1 NCAPG2 gene_id:54892|Hs108|chr7 (1156) 7432 1712.4 0 >>CCDS43686.1 NCAPG2 gene_id:54892|Hs108|chr7 (1143 aa) initn: 7523 init1: 7523 opt: 7523 Z-score: 9302.9 bits: 1733.2 E(32554): 0 Smith-Waterman score: 7523; 100.0% identity (100.0% similar) in 1143 aa overlap (1-1143:1-1143) 10 20 30 40 50 60 pF1KE3 MEKRETFVQAVSKELVGEFLQFVQLDKEASDPFSLNELLDELSRKQKEELWQRLKNLLTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 MEKRETFVQAVSKELVGEFLQFVQLDKEASDPFSLNELLDELSRKQKEELWQRLKNLLTD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 VLLESPVDGWQVVEAQGEDNMETEHGSKMRKSIEIIYAITSVILASVSVINESENYEALL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 VLLESPVDGWQVVEAQGEDNMETEHGSKMRKSIEIIYAITSVILASVSVINESENYEALL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 ECVIILNGILYALPESERKLQSSIQDLCVTWWEKGLPAKEDTGKTAFVMLLRRSLETKTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 ECVIILNGILYALPESERKLQSSIQDLCVTWWEKGLPAKEDTGKTAFVMLLRRSLETKTG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 ADVCRLWRIHQALYCFDYDLEESGEIKDMLLECFININYIKKEEGRRFLSCLFNWNINFI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 ADVCRLWRIHQALYCFDYDLEESGEIKDMLLECFININYIKKEEGRRFLSCLFNWNINFI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 KMIHGTIKNQLQGLQKSLMVYIAEIYFRAWKKASGKILEAIENDCIQDFMFHGIHLPRRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 KMIHGTIKNQLQGLQKSLMVYIAEIYFRAWKKASGKILEAIENDCIQDFMFHGIHLPRRS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 PVHSKVREVLSYFHHQKKVRQGVEEMLYRLYKPILWRGLKARNSEVRSNAALLFVEAFPI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 PVHSKVREVLSYFHHQKKVRQGVEEMLYRLYKPILWRGLKARNSEVRSNAALLFVEAFPI 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 RDPNLHAIEMDSEIQKQFEELYSLLEDPYPMVRSTGILGVCKITSKYWEMMPPTILIDLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 RDPNLHAIEMDSEIQKQFEELYSLLEDPYPMVRSTGILGVCKITSKYWEMMPPTILIDLL 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE3 KKVTGELAFDTSSADVRCSVFKCLPMILDNKLSHPLLEQLLPALRYSLHDNSEKVRVAFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 KKVTGELAFDTSSADVRCSVFKCLPMILDNKLSHPLLEQLLPALRYSLHDNSEKVRVAFV 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE3 DMLLKIKAVRAAKFWKICPMEHILVRLETDSRPVSRRLVSLIFNSFLPVNQPEEVWCERC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 DMLLKIKAVRAAKFWKICPMEHILVRLETDSRPVSRRLVSLIFNSFLPVNQPEEVWCERC 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE3 VTLVQMNHAAARRFYQYAHEHTACTNIAKLIHVIRHCLNACIQRAVREPPEDEEEEDGRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 VTLVQMNHAAARRFYQYAHEHTACTNIAKLIHVIRHCLNACIQRAVREPPEDEEEEDGRE 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE3 KENVTVLDKTLSVNDVACMAGLLEIIVILWKSIDRSMENNKEAKLYTINKFASVLPEYLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 KENVTVLDKTLSVNDVACMAGLLEIIVILWKSIDRSMENNKEAKLYTINKFASVLPEYLK 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE3 VFKDDRCKIPLFMLMSFMPASAVPPFSCGVISTLRSREEGAVDKSYCTLLDCLCSWGQVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 VFKDDRCKIPLFMLMSFMPASAVPPFSCGVISTLRSREEGAVDKSYCTLLDCLCSWGQVG 670 680 690 700 710 720 730 740 750 760 770 780 pF1KE3 HILELVDNWLPTEHAQAKSNTASKGRVQIHDTRPVKPELALVYIEYLLTHPKNRECLLSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 HILELVDNWLPTEHAQAKSNTASKGRVQIHDTRPVKPELALVYIEYLLTHPKNRECLLSA 730 740 750 760 770 780 790 800 810 820 830 840 pF1KE3 PRKKLNHLLKALETSKADLESLLQTPGGKPRGFSEAAAPRAFGLHCRLSIHLQHKFCSEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 PRKKLNHLLKALETSKADLESLLQTPGGKPRGFSEAAAPRAFGLHCRLSIHLQHKFCSEG 790 800 810 820 830 840 850 860 870 880 890 900 pF1KE3 KVYLSMLEDTGFWLESKILSFIQDQEEDYLKLHRVIYQQIIQTYLTVCKDVVMVGLGDHQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 KVYLSMLEDTGFWLESKILSFIQDQEEDYLKLHRVIYQQIIQTYLTVCKDVVMVGLGDHQ 850 860 870 880 890 900 910 920 930 940 950 960 pF1KE3 FQMQLLQRSLGIMQTVKGFFYVSLLLDILKEITGSSLIQKTDSDEEVAMLLDTVQKVFQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 FQMQLLQRSLGIMQTVKGFFYVSLLLDILKEITGSSLIQKTDSDEEVAMLLDTVQKVFQK 910 920 930 940 950 960 970 980 990 1000 1010 1020 pF1KE3 MLECIARSFRKQPEEGLRLLYSVQRPLHEFITAVQSRHTDTPVHRGVLSTLIAGPVVEIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 MLECIARSFRKQPEEGLRLLYSVQRPLHEFITAVQSRHTDTPVHRGVLSTLIAGPVVEIS 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 pF1KE3 HQLRKVSDVEELTPPEHLSDLPPFSRCLIGIIIKSSNVVRSFLDELKACVASNDIEGIVC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 HQLRKVSDVEELTPPEHLSDLPPFSRCLIGIIIKSSNVVRSFLDELKACVASNDIEGIVC 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 pF1KE3 LTAAVHIILVINAGKHKSSKVREVAATVHRKLKTFMEITLEEDSIERFLYESSSRTLGEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 LTAAVHIILVINAGKHKSSKVREVAATVHRKLKTFMEITLEEDSIERFLYESSSRTLGEL 1090 1100 1110 1120 1130 1140 pF1KE3 LNS ::: CCDS43 LNS >>CCDS64816.1 NCAPG2 gene_id:54892|Hs108|chr7 (1156 aa) initn: 7463 init1: 7432 opt: 7432 Z-score: 9190.2 bits: 1712.4 E(32554): 0 Smith-Waterman score: 7432; 99.9% identity (100.0% similar) in 1128 aa overlap (1-1128:1-1128) 10 20 30 40 50 60 pF1KE3 MEKRETFVQAVSKELVGEFLQFVQLDKEASDPFSLNELLDELSRKQKEELWQRLKNLLTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 MEKRETFVQAVSKELVGEFLQFVQLDKEASDPFSLNELLDELSRKQKEELWQRLKNLLTD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 VLLESPVDGWQVVEAQGEDNMETEHGSKMRKSIEIIYAITSVILASVSVINESENYEALL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 VLLESPVDGWQVVEAQGEDNMETEHGSKMRKSIEIIYAITSVILASVSVINESENYEALL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 ECVIILNGILYALPESERKLQSSIQDLCVTWWEKGLPAKEDTGKTAFVMLLRRSLETKTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 ECVIILNGILYALPESERKLQSSIQDLCVTWWEKGLPAKEDTGKTAFVMLLRRSLETKTG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 ADVCRLWRIHQALYCFDYDLEESGEIKDMLLECFININYIKKEEGRRFLSCLFNWNINFI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 ADVCRLWRIHQALYCFDYDLEESGEIKDMLLECFININYIKKEEGRRFLSCLFNWNINFI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 KMIHGTIKNQLQGLQKSLMVYIAEIYFRAWKKASGKILEAIENDCIQDFMFHGIHLPRRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 KMIHGTIKNQLQGLQKSLMVYIAEIYFRAWKKASGKILEAIENDCIQDFMFHGIHLPRRS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 PVHSKVREVLSYFHHQKKVRQGVEEMLYRLYKPILWRGLKARNSEVRSNAALLFVEAFPI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 PVHSKVREVLSYFHHQKKVRQGVEEMLYRLYKPILWRGLKARNSEVRSNAALLFVEAFPI 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 RDPNLHAIEMDSEIQKQFEELYSLLEDPYPMVRSTGILGVCKITSKYWEMMPPTILIDLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 RDPNLHAIEMDSEIQKQFEELYSLLEDPYPMVRSTGILGVCKITSKYWEMMPPTILIDLL 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE3 KKVTGELAFDTSSADVRCSVFKCLPMILDNKLSHPLLEQLLPALRYSLHDNSEKVRVAFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 KKVTGELAFDTSSADVRCSVFKCLPMILDNKLSHPLLEQLLPALRYSLHDNSEKVRVAFV 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE3 DMLLKIKAVRAAKFWKICPMEHILVRLETDSRPVSRRLVSLIFNSFLPVNQPEEVWCERC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 DMLLKIKAVRAAKFWKICPMEHILVRLETDSRPVSRRLVSLIFNSFLPVNQPEEVWCERC 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE3 VTLVQMNHAAARRFYQYAHEHTACTNIAKLIHVIRHCLNACIQRAVREPPEDEEEEDGRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 VTLVQMNHAAARRFYQYAHEHTACTNIAKLIHVIRHCLNACIQRAVREPPEDEEEEDGRE 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE3 KENVTVLDKTLSVNDVACMAGLLEIIVILWKSIDRSMENNKEAKLYTINKFASVLPEYLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 KENVTVLDKTLSVNDVACMAGLLEIIVILWKSIDRSMENNKEAKLYTINKFASVLPEYLK 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE3 VFKDDRCKIPLFMLMSFMPASAVPPFSCGVISTLRSREEGAVDKSYCTLLDCLCSWGQVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 VFKDDRCKIPLFMLMSFMPASAVPPFSCGVISTLRSREEGAVDKSYCTLLDCLCSWGQVG 670 680 690 700 710 720 730 740 750 760 770 780 pF1KE3 HILELVDNWLPTEHAQAKSNTASKGRVQIHDTRPVKPELALVYIEYLLTHPKNRECLLSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 HILELVDNWLPTEHAQAKSNTASKGRVQIHDTRPVKPELALVYIEYLLTHPKNRECLLSA 730 740 750 760 770 780 790 800 810 820 830 840 pF1KE3 PRKKLNHLLKALETSKADLESLLQTPGGKPRGFSEAAAPRAFGLHCRLSIHLQHKFCSEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 PRKKLNHLLKALETSKADLESLLQTPGGKPRGFSEAAAPRAFGLHCRLSIHLQHKFCSEG 790 800 810 820 830 840 850 860 870 880 890 900 pF1KE3 KVYLSMLEDTGFWLESKILSFIQDQEEDYLKLHRVIYQQIIQTYLTVCKDVVMVGLGDHQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 KVYLSMLEDTGFWLESKILSFIQDQEEDYLKLHRVIYQQIIQTYLTVCKDVVMVGLGDHQ 850 860 870 880 890 900 910 920 930 940 950 960 pF1KE3 FQMQLLQRSLGIMQTVKGFFYVSLLLDILKEITGSSLIQKTDSDEEVAMLLDTVQKVFQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 FQMQLLQRSLGIMQTVKGFFYVSLLLDILKEITGSSLIQKTDSDEEVAMLLDTVQKVFQK 910 920 930 940 950 960 970 980 990 1000 1010 1020 pF1KE3 MLECIARSFRKQPEEGLRLLYSVQRPLHEFITAVQSRHTDTPVHRGVLSTLIAGPVVEIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 MLECIARSFRKQPEEGLRLLYSVQRPLHEFITAVQSRHTDTPVHRGVLSTLIAGPVVEIS 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 pF1KE3 HQLRKVSDVEELTPPEHLSDLPPFSRCLIGIIIKSSNVVRSFLDELKACVASNDIEGIVC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 HQLRKVSDVEELTPPEHLSDLPPFSRCLIGIIIKSSNVVRSFLDELKACVASNDIEGIVC 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 pF1KE3 LTAAVHIILVINAGKHKSSKVREVAATVHRKLKTFMEITLEEDSIERFLYESSSRTLGEL :::::::::::::::::::::::::::::::::::::::::::::::. CCDS64 LTAAVHIILVINAGKHKSSKVREVAATVHRKLKTFMEITLEEDSIERYEDLLCCPGWALT 1090 1100 1110 1120 1130 1140 pF1KE3 LNS CCDS64 PGLLDSIYPSASVPIG 1150 1143 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 17:54:38 2016 done: Mon Nov 7 17:54:39 2016 Total Scan time: 3.840 Total Display time: 0.080 Function used was FASTA [36.3.4 Apr, 2011]