FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB0448, 911 aa 1>>>pF1KB0448 911 - 911 aa - 911 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 10.3001+/-0.00114; mu= -2.0254+/- 0.068 mean_var=243.8597+/-48.985, 0's: 0 Z-trim(110.8): 29 B-trim: 5 in 1/50 Lambda= 0.082130 statistics sampled from 11877 (11899) to 11877 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.706), E-opt: 0.2 (0.366), width: 16 Scan time: 3.570 The best scores are: opt bits E(32554) CCDS9016.1 E2F7 gene_id:144455|Hs108|chr12 ( 911) 5962 720.3 4e-207 CCDS7849.1 E2F8 gene_id:79733|Hs108|chr11 ( 867) 911 121.8 5.5e-27 >>CCDS9016.1 E2F7 gene_id:144455|Hs108|chr12 (911 aa) initn: 5962 init1: 5962 opt: 5962 Z-score: 3832.1 bits: 720.3 E(32554): 4e-207 Smith-Waterman score: 5962; 99.9% identity (100.0% similar) in 911 aa overlap (1-911:1-911) 10 20 30 40 50 60 pF1KB0 MEVNCLTLKDLISPRQPRLDFAVEDGENAQKENIFVDRSRMAPKTPIKNEPIDLSKQKKF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS90 MEVNCLTLKDLISPRQPRLDFAVEDGENAQKENIFVDRSRMAPKTPIKNEPIDLSKQKKF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB0 TPERNPITPVKLVDRQQAEPWTPTANLKMLISAASPDIRDREKKKGLFRPIENKDDAFTD :::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::: CCDS90 TPERNPITPVKFVDRQQAEPWTPTANLKMLISAASPDIRDREKKKGLFRPIENKDDAFTD 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB0 SLQLDVVGDSAVDEFEKQRPSRKQKSLGLLCQKFLARYPSYPLSTEKTTISLDEVAVSLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS90 SLQLDVVGDSAVDEFEKQRPSRKQKSLGLLCQKFLARYPSYPLSTEKTTISLDEVAVSLG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB0 VERRRIYDIVNVLESLHLVSRVAKNQYGWHGRHSLPKTLRNLQRLGEEQKYEEQMAYLQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS90 VERRRIYDIVNVLESLHLVSRVAKNQYGWHGRHSLPKTLRNLQRLGEEQKYEEQMAYLQQ 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB0 KELDLIDYKFGERKKDGDPDSQEQQLLDFSEPDCPSSSANSRKDKSLRIMSQKFVMLFLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS90 KELDLIDYKFGERKKDGDPDSQEQQLLDFSEPDCPSSSANSRKDKSLRIMSQKFVMLFLV 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB0 SKTKIVTLDVAAKILIEESQDAPDHSKFKTKVRRLYDIANVLTSLALIKKVHVTEERGRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS90 SKTKIVTLDVAAKILIEESQDAPDHSKFKTKVRRLYDIANVLTSLALIKKVHVTEERGRK 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB0 PAFKWIGPVDFSSSDEELVDVSASVLPELKRETYGQIQVCAKQKLARHGSFNTVQASERI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS90 PAFKWIGPVDFSSSDEELVDVSASVLPELKRETYGQIQVCAKQKLARHGSFNTVQASERI 370 380 390 400 410 420 430 440 450 460 470 480 pF1KB0 QRKVNSEPSSPYREEQGSGGYSLEIGSLAAVYRQKIEDNSQGKAFASKRVVPPSSSLDPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS90 QRKVNSEPSSPYREEQGSGGYSLEIGSLAAVYRQKIEDNSQGKAFASKRVVPPSSSLDPV 430 440 450 460 470 480 490 500 510 520 530 540 pF1KB0 APFPVLSVDPEYCVNPLAHPVFSVAQTDLQAFSMQNGLNGQVDVSLASAASAVESLKPAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS90 APFPVLSVDPEYCVNPLAHPVFSVAQTDLQAFSMQNGLNGQVDVSLASAASAVESLKPAL 490 500 510 520 530 540 550 560 570 580 590 600 pF1KB0 LAGQPLVYVPSASLFMLYGSLQEGPASGSGSERDDRSSEAPATVELSSAPSAQKRLCEER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS90 LAGQPLVYVPSASLFMLYGSLQEGPASGSGSERDDRSSEAPATVELSSAPSAQKRLCEER 550 560 570 580 590 600 610 620 630 640 650 660 pF1KB0 KPQEEDEPATKRQSREYEDGPLSLVMPKKPSDSTDLASPKTMGNRASIPLKDIHVNGQLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS90 KPQEEDEPATKRQSREYEDGPLSLVMPKKPSDSTDLASPKTMGNRASIPLKDIHVNGQLP 610 620 630 640 650 660 670 680 690 700 710 720 pF1KB0 AAEEISGKATANSLVSSEWGNPSRNTDVEKPSKENESTKEPSLLQYLCVQSPAGLNGFNV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS90 AAEEISGKATANSLVSSEWGNPSRNTDVEKPSKENESTKEPSLLQYLCVQSPAGLNGFNV 670 680 690 700 710 720 730 740 750 760 770 780 pF1KB0 LLSGSQTPPTVGPSSGQLPSFSVPCMVLPSPPLGPFPVLYSPAMPGPVSSTLGALPNTGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS90 LLSGSQTPPTVGPSSGQLPSFSVPCMVLPSPPLGPFPVLYSPAMPGPVSSTLGALPNTGP 730 740 750 760 770 780 790 800 810 820 830 840 pF1KB0 VNFSLPGLGSIAQLLVGPTAVVNPKSSTLPSADPQLQSQPSLNLSPVMSRSHSVVQQPES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS90 VNFSLPGLGSIAQLLVGPTAVVNPKSSTLPSADPQLQSQPSLNLSPVMSRSHSVVQQPES 790 800 810 820 830 840 850 860 870 880 890 900 pF1KB0 PVYVGHPVSVVKLHQSPVPVTPKSIQRTHRETFFKTPGSLGDPVLKRRERNQSRNTSSAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS90 PVYVGHPVSVVKLHQSPVPVTPKSIQRTHRETFFKTPGSLGDPVLKRRERNQSRNTSSAQ 850 860 870 880 890 900 910 pF1KB0 RRLEIPSGGAD ::::::::::: CCDS90 RRLEIPSGGAD 910 >>CCDS7849.1 E2F8 gene_id:79733|Hs108|chr11 (867 aa) initn: 1206 init1: 499 opt: 911 Z-score: 597.9 bits: 121.8 E(32554): 5.5e-27 Smith-Waterman score: 1401; 37.4% identity (61.2% similar) in 934 aa overlap (27-907:2-863) 10 20 30 40 50 pF1KB0 MEVNCLTLKDLISPRQPRLDFAVEDGENAQKENIFVD-RSRMAPKTPIKNEPIDLSKQKK :: .:::.: . ..: :::.:. . CCDS78 MEN-EKENLFCEPHKRGLMKTPLKESTTANIVLAE 10 20 30 60 70 80 90 100 110 pF1KB0 FTPERNPIT-PVKLVDRQQAEPWTPTANLKMLISAASPDIRDREKKKGLFRPIENKDDAF . :. .:.: :.: . .:.:::::::::::::::.::.::.:..:.::: . .: CCDS78 IQPDFGPLTTPTKPKEGSQGEPWTPTANLKMLISAVSPEIRNRDQKRGLFDNRSGLPEA- 40 50 60 70 80 90 120 130 140 150 160 170 pF1KB0 TDSLQLDVVGDSAVDEFEKQRPSRKQKSLGLLCQKFLARYPSYPLSTEKTTISLDEVAVS : .. . :: ::::..::::.:::::::.:::::::.:: . .. : ::::: CCDS78 KDCIHEHLSGD----EFEKSQPSRKEKSLGLLCHKFLARYPNYPNPAVNNDICLDEVAEE 100 110 120 130 140 180 190 200 210 220 230 pF1KB0 LGVERRRIYDIVNVLESLHLVSRVAKNQYGWHGRHSLPKTLRNLQRLGEEQKYEEQMAYL :.:::::::::::::::::.:::.:::.: :::::.: ::: .:. .:::.:: ::. .. CCDS78 LNVERRRIYDIVNVLESLHMVSRLAKNRYTWHGRHNLNKTLGTLKSIGEENKYAEQIMMI 150 160 170 180 190 200 240 250 260 270 280 290 pF1KB0 QQKE----LDLI-DYKFGER--KKDGDPDSQEQQ-LLDFSEPDCPSSSANSRKDKSLRIM ..:: .:.: .:.. .. :.. :... .. .... . ..:.:::::::::.: CCDS78 KKKEYEQEFDFIKSYSIEDHIIKSNTGPNGHPDMCFVELPGVEFRAASVNSRKDKSLRVM 210 220 230 240 250 260 300 310 320 330 340 pF1KB0 SQKFVMLFLVSKTKIVTLDVAAKILIEESQ-DAPDHSKFKTKVRRLYDIANVLTSLALIK ::::::::::: .::.:.::::::: :.. . :.::::::.::::::::::.:: ::: CCDS78 SQKFVMLFLVSTPQIVSLEVAAKILIGEDHVEDLDKSKFKTKIRRLYDIANVLSSLDLIK 270 280 290 300 310 320 350 360 370 380 390 400 pF1KB0 KVHVTEERGRKPAFKWIGP--VDFSSSDEELVDVSASVLPELKRETYGQIQVCAKQ---- :::::::::::::::: :: .:.. .. . : : :..: . . :::. CCDS78 KVHVTEERGRKPAFKWTGPEISPNTSGSSPVIHFTPSDL-EVRRSSK---ENCAKNLFST 330 340 350 360 370 380 410 420 430 440 450 pF1KB0 ----KLARHGSF-NTVQASERIQRKVNSEPSSPYREE-----QGSGGYSLEIGSLAAVYR ...:: :. . :.. : .::.:: :::: . . :.:. . ....:::. . CCDS78 RGKPNFTRHPSLIKLVKSIESDRRKINSAPSSPIKTNKAESSQNSAPFPSKMAQLAAICK 390 400 410 420 430 440 460 470 480 490 500 510 pF1KB0 QKIEDNSQGKAFASKRVVPPSSSLDPVAPF-PVLSVDPEYCVNPLAHPVFSVAQTDLQAF ...:..:. . : . :. ::::. : .... : . : .:. : CCDS78 MQLEEQSSESRQKVKVQLARSGPCKPVAPLDPPVNAEMELTAPSLIQPLGMVPL------ 450 460 470 480 490 520 530 540 550 560 pF1KB0 SMQNGLNGQVDVSLASAASAVES---LKPALLAGQPLVYVPSASLFMLYGSLQEGPASGS . . :.. : . : .: :. :.:. : : . .: .: . . . :.:: CCDS78 -IPSPLSSAVPLILPQAPSGPSYAIYLQPTQ-AHQSV--TPPQGLSPTVCTTHSSKATGS 500 510 520 530 540 550 570 580 590 600 610 620 pF1KB0 GSERDDRSSEAPATVELSSAPSAQKRLCEERKPQEEDEPATKRQSREYEDGPLSLVMPKK . : . .: . .:: . : : : . : .: .:: : . :. CCDS78 KDSTDATTEKAANDTSKASASTRPGSLL----PAPERQGAKSR-TRE----PAGERGSKR 560 570 580 590 600 630 640 650 660 670 680 pF1KB0 PSDSTDLASPKTMGNRASIPLKDIHVNGQLPAAEEISGKATANSLVSSEWGNPSRNTDVE : : .: : . . :: .. .. :. :: . :: : : . CCDS78 ASMLEDSGSKKKFKE----DLKGLE---NVSATLFPSGYLIPLTQCSS-LGAESILS--- 610 620 630 640 650 690 700 710 720 730 740 pF1KB0 KPSKENESTKEPSLLQYLCVQSP-AGLNGFNVLLSGSQTPPTVGPSSGQLPSFSV-PCMV .::: :. :. : .:: ::. . ...:. .. ..::: : : . CCDS78 --GKENSSALSPNHRIY---SSPIAGV----IPVTSSEL------TAVNFPSFHVTPLKL 660 670 680 690 700 750 760 770 780 790 pF1KB0 LPSPP-LGPFPVLYSPAM----PGPVSSTLGALPNTGPVNFSLPGLGSIA---QLLVGPT . :: .. :: :::. : :... :... :::.: :: :. :: ..: CCDS78 MVSPTSVAAVPVGNSPALASSHPVPIQN-----PSSAIVNFTLQHLGLISPNVQLSASPG 710 720 730 740 750 800 810 820 830 840 850 pF1KB0 AVVNPKSSTLPSAD--PQ---LQSQPSLNL-SPVMSRSHSVVQQPESPVYVGHPVSVVKL . . : : . :.. :. :. . : ::: ..: ::. :. :.:. CCDS78 SGIVPVSPRIESVNVAPENAGTQQGRATNYDSPVPGQS-----QPN-----GQSVAVTGA 760 770 780 790 800 860 870 880 890 900 pF1KB0 HQSPVPVTPKSIQRTHRETFFKTPGSLGDPVLKRRERNQSRNTSS------AQRRLEIPS .: :::::::. : . :.::.:::. :. . .. : .: ::.::. . CCDS78 QQ-PVPVTPKGSQLVA-ESFFRTPGGPTKPTSSSCMDFEGANKTSLGTLFVPQRKLEVST 810 820 830 840 850 860 910 pF1KB0 GGAD CCDS78 EDVH 911 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 17:50:55 2016 done: Mon Nov 7 17:50:56 2016 Total Scan time: 3.570 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]