Result of FASTA (omim) for
pFN21AB5914
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5914, 530 aa
1>>>pF1KB5914 530 - 530 aa - 530 aa
Library: /omim/omim.rfq.tfa
64369986 residues in 92320 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.7067+/-0.000364; mu= 11.6541+/- 0.023
mean_var=104.6337+/-21.292, 0's: 0 Z-trim(115.8): 421 B-trim: 13 in 2/51
Lambda= 0.125383
statistics sampled from 27079 (27506) to 27079 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.67), E-opt: 0.2 (0.298), width: 16
Scan time: 4.840
The best scores are: opt bits E(92320)
XP_016876569 (OMIM: 601663,618187) estrogen recept ( 530) 3612 664.3 2.7e-190
XP_016876568 (OMIM: 601663,618187) estrogen recept ( 530) 3612 664.3 2.7e-190
XP_016876571 (OMIM: 601663,618187) estrogen recept ( 530) 3612 664.3 2.7e-190
NP_001428 (OMIM: 601663,618187) estrogen receptor ( 530) 3612 664.3 2.7e-190
XP_016876572 (OMIM: 601663,618187) estrogen recept ( 530) 3612 664.3 2.7e-190
XP_016876570 (OMIM: 601663,618187) estrogen recept ( 530) 3612 664.3 2.7e-190
NP_001278641 (OMIM: 601663,618187) estrogen recept ( 495) 3206 590.9 3.3e-168
XP_016876573 (OMIM: 601663,618187) estrogen recept ( 495) 3206 590.9 3.3e-168
NP_001278652 (OMIM: 601663,618187) estrogen recept ( 495) 3206 590.9 3.3e-168
NP_001035365 (OMIM: 601663,618187) estrogen recept ( 495) 3206 590.9 3.3e-168
NP_001201831 (OMIM: 601663,618187) estrogen recept ( 481) 3202 590.1 5.2e-168
NP_001258805 (OMIM: 601663,618187) estrogen recept ( 474) 3197 589.2 9.7e-168
NP_001258806 (OMIM: 601663,618187) estrogen recept ( 439) 2226 413.6 6.8e-115
XP_016865872 (OMIM: 114480,133430,157300,608446,61 ( 332) 1013 194.1 6.1e-49
XP_011533851 (OMIM: 114480,133430,157300,608446,61 ( 352) 1013 194.1 6.4e-49
XP_016865871 (OMIM: 114480,133430,157300,608446,61 ( 376) 1013 194.1 6.7e-49
XP_006715438 (OMIM: 114480,133430,157300,608446,61 ( 422) 1013 194.1 7.4e-49
NP_001278170 (OMIM: 114480,133430,157300,608446,61 ( 594) 1013 194.2 9.9e-49
XP_016865867 (OMIM: 114480,133430,157300,608446,61 ( 595) 1013 194.2 9.9e-49
XP_011533847 (OMIM: 114480,133430,157300,608446,61 ( 595) 1013 194.2 9.9e-49
NP_001116214 (OMIM: 114480,133430,157300,608446,61 ( 595) 1013 194.2 9.9e-49
NP_001116212 (OMIM: 114480,133430,157300,608446,61 ( 595) 1013 194.2 9.9e-49
XP_016865868 (OMIM: 114480,133430,157300,608446,61 ( 595) 1013 194.2 9.9e-49
NP_000116 (OMIM: 114480,133430,157300,608446,61536 ( 595) 1013 194.2 9.9e-49
XP_011533845 (OMIM: 114480,133430,157300,608446,61 ( 595) 1013 194.2 9.9e-49
XP_016865865 (OMIM: 114480,133430,157300,608446,61 ( 595) 1013 194.2 9.9e-49
XP_016865866 (OMIM: 114480,133430,157300,608446,61 ( 595) 1013 194.2 9.9e-49
NP_001116213 (OMIM: 114480,133430,157300,608446,61 ( 595) 1013 194.2 9.9e-49
XP_016865869 (OMIM: 114480,133430,157300,608446,61 ( 595) 1013 194.2 9.9e-49
XP_011533846 (OMIM: 114480,133430,157300,608446,61 ( 595) 1013 194.2 9.9e-49
XP_016865870 (OMIM: 114480,133430,157300,608446,61 ( 595) 1013 194.2 9.9e-49
NP_001278159 (OMIM: 114480,133430,157300,608446,61 ( 597) 1013 194.2 9.9e-49
NP_004442 (OMIM: 601998) steroid hormone receptor ( 423) 787 153.3 1.5e-36
NP_001269379 (OMIM: 601998) steroid hormone recept ( 423) 787 153.3 1.5e-36
XP_016872802 (OMIM: 601998) steroid hormone recept ( 433) 787 153.3 1.5e-36
NP_001269380 (OMIM: 601998) steroid hormone recept ( 422) 782 152.4 2.8e-36
XP_024309728 (OMIM: 602969) estrogen-related recep ( 442) 763 148.9 3.2e-35
XP_016856120 (OMIM: 602969) estrogen-related recep ( 442) 763 148.9 3.2e-35
XP_016856126 (OMIM: 602969) estrogen-related recep ( 442) 763 148.9 3.2e-35
XP_016856124 (OMIM: 602969) estrogen-related recep ( 442) 763 148.9 3.2e-35
XP_011507581 (OMIM: 602969) estrogen-related recep ( 442) 763 148.9 3.2e-35
XP_011507578 (OMIM: 602969) estrogen-related recep ( 442) 763 148.9 3.2e-35
XP_016856121 (OMIM: 602969) estrogen-related recep ( 442) 763 148.9 3.2e-35
XP_016856125 (OMIM: 602969) estrogen-related recep ( 442) 763 148.9 3.2e-35
XP_011507576 (OMIM: 602969) estrogen-related recep ( 442) 763 148.9 3.2e-35
XP_011507580 (OMIM: 602969) estrogen-related recep ( 442) 763 148.9 3.2e-35
XP_016856122 (OMIM: 602969) estrogen-related recep ( 442) 763 148.9 3.2e-35
XP_016856123 (OMIM: 602969) estrogen-related recep ( 442) 763 148.9 3.2e-35
XP_011507577 (OMIM: 602969) estrogen-related recep ( 442) 763 148.9 3.2e-35
XP_024309727 (OMIM: 602969) estrogen-related recep ( 442) 763 148.9 3.2e-35
>>XP_016876569 (OMIM: 601663,618187) estrogen receptor b (530 aa)
initn: 3612 init1: 3612 opt: 3612 Z-score: 3538.0 bits: 664.3 E(92320): 2.7e-190
Smith-Waterman score: 3612; 100.0% identity (100.0% similar) in 530 aa overlap (1-530:1-530)
10 20 30 40 50 60
pF1KB5 MDIKNSPSSLNSPSSYNCSQSILPLEHGSIYIPSSYVDSHHEYPAMTFYSPAVMNYSIPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDIKNSPSSLNSPSSYNCSQSILPLEHGSIYIPSSYVDSHHEYPAMTFYSPAVMNYSIPS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 NVTNLEGGPGRQTTSPNVLWPTPGHLSPLVVHRQLSHLYAEPQKSPWCEARSLEHTLPVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NVTNLEGGPGRQTTSPNVLWPTPGHLSPLVVHRQLSHLYAEPQKSPWCEARSLEHTLPVN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 RETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 NDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 CAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 LADKELVHMISWAKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIFAPDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LADKELVHMISWAKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIFAPDL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 VLDRDEGKCVEGILEIFDMLLATTSRFRELKLQHKEYLCVKAMILLNSSMYPLVTATQDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLDRDEGKCVEGILEIFDMLLATTSRFRELKLQHKEYLCVKAMILLNSSMYPLVTATQDA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 DSSRKLAHLLNAVTDALVWVIAKSGISSQQQSMRLANLLMLLSHVRHASNKGMEHLLNMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DSSRKLAHLLNAVTDALVWVIAKSGISSQQQSMRLANLLMLLSHVRHASNKGMEHLLNMK
430 440 450 460 470 480
490 500 510 520 530
pF1KB5 CKNVVPVYDLLLEMLNAHVLRGCKSSITGSECSPAEDSKSKEGSQNPQSQ
::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CKNVVPVYDLLLEMLNAHVLRGCKSSITGSECSPAEDSKSKEGSQNPQSQ
490 500 510 520 530
>>XP_016876568 (OMIM: 601663,618187) estrogen receptor b (530 aa)
initn: 3612 init1: 3612 opt: 3612 Z-score: 3538.0 bits: 664.3 E(92320): 2.7e-190
Smith-Waterman score: 3612; 100.0% identity (100.0% similar) in 530 aa overlap (1-530:1-530)
10 20 30 40 50 60
pF1KB5 MDIKNSPSSLNSPSSYNCSQSILPLEHGSIYIPSSYVDSHHEYPAMTFYSPAVMNYSIPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDIKNSPSSLNSPSSYNCSQSILPLEHGSIYIPSSYVDSHHEYPAMTFYSPAVMNYSIPS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 NVTNLEGGPGRQTTSPNVLWPTPGHLSPLVVHRQLSHLYAEPQKSPWCEARSLEHTLPVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NVTNLEGGPGRQTTSPNVLWPTPGHLSPLVVHRQLSHLYAEPQKSPWCEARSLEHTLPVN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 RETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 NDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 CAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 LADKELVHMISWAKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIFAPDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LADKELVHMISWAKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIFAPDL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 VLDRDEGKCVEGILEIFDMLLATTSRFRELKLQHKEYLCVKAMILLNSSMYPLVTATQDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLDRDEGKCVEGILEIFDMLLATTSRFRELKLQHKEYLCVKAMILLNSSMYPLVTATQDA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 DSSRKLAHLLNAVTDALVWVIAKSGISSQQQSMRLANLLMLLSHVRHASNKGMEHLLNMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DSSRKLAHLLNAVTDALVWVIAKSGISSQQQSMRLANLLMLLSHVRHASNKGMEHLLNMK
430 440 450 460 470 480
490 500 510 520 530
pF1KB5 CKNVVPVYDLLLEMLNAHVLRGCKSSITGSECSPAEDSKSKEGSQNPQSQ
::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CKNVVPVYDLLLEMLNAHVLRGCKSSITGSECSPAEDSKSKEGSQNPQSQ
490 500 510 520 530
>>XP_016876571 (OMIM: 601663,618187) estrogen receptor b (530 aa)
initn: 3612 init1: 3612 opt: 3612 Z-score: 3538.0 bits: 664.3 E(92320): 2.7e-190
Smith-Waterman score: 3612; 100.0% identity (100.0% similar) in 530 aa overlap (1-530:1-530)
10 20 30 40 50 60
pF1KB5 MDIKNSPSSLNSPSSYNCSQSILPLEHGSIYIPSSYVDSHHEYPAMTFYSPAVMNYSIPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDIKNSPSSLNSPSSYNCSQSILPLEHGSIYIPSSYVDSHHEYPAMTFYSPAVMNYSIPS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 NVTNLEGGPGRQTTSPNVLWPTPGHLSPLVVHRQLSHLYAEPQKSPWCEARSLEHTLPVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NVTNLEGGPGRQTTSPNVLWPTPGHLSPLVVHRQLSHLYAEPQKSPWCEARSLEHTLPVN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 RETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 NDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 CAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 LADKELVHMISWAKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIFAPDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LADKELVHMISWAKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIFAPDL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 VLDRDEGKCVEGILEIFDMLLATTSRFRELKLQHKEYLCVKAMILLNSSMYPLVTATQDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLDRDEGKCVEGILEIFDMLLATTSRFRELKLQHKEYLCVKAMILLNSSMYPLVTATQDA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 DSSRKLAHLLNAVTDALVWVIAKSGISSQQQSMRLANLLMLLSHVRHASNKGMEHLLNMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DSSRKLAHLLNAVTDALVWVIAKSGISSQQQSMRLANLLMLLSHVRHASNKGMEHLLNMK
430 440 450 460 470 480
490 500 510 520 530
pF1KB5 CKNVVPVYDLLLEMLNAHVLRGCKSSITGSECSPAEDSKSKEGSQNPQSQ
::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CKNVVPVYDLLLEMLNAHVLRGCKSSITGSECSPAEDSKSKEGSQNPQSQ
490 500 510 520 530
>>NP_001428 (OMIM: 601663,618187) estrogen receptor beta (530 aa)
initn: 3612 init1: 3612 opt: 3612 Z-score: 3538.0 bits: 664.3 E(92320): 2.7e-190
Smith-Waterman score: 3612; 100.0% identity (100.0% similar) in 530 aa overlap (1-530:1-530)
10 20 30 40 50 60
pF1KB5 MDIKNSPSSLNSPSSYNCSQSILPLEHGSIYIPSSYVDSHHEYPAMTFYSPAVMNYSIPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDIKNSPSSLNSPSSYNCSQSILPLEHGSIYIPSSYVDSHHEYPAMTFYSPAVMNYSIPS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 NVTNLEGGPGRQTTSPNVLWPTPGHLSPLVVHRQLSHLYAEPQKSPWCEARSLEHTLPVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NVTNLEGGPGRQTTSPNVLWPTPGHLSPLVVHRQLSHLYAEPQKSPWCEARSLEHTLPVN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 RETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 NDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 CAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 LADKELVHMISWAKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIFAPDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LADKELVHMISWAKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIFAPDL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 VLDRDEGKCVEGILEIFDMLLATTSRFRELKLQHKEYLCVKAMILLNSSMYPLVTATQDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VLDRDEGKCVEGILEIFDMLLATTSRFRELKLQHKEYLCVKAMILLNSSMYPLVTATQDA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 DSSRKLAHLLNAVTDALVWVIAKSGISSQQQSMRLANLLMLLSHVRHASNKGMEHLLNMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DSSRKLAHLLNAVTDALVWVIAKSGISSQQQSMRLANLLMLLSHVRHASNKGMEHLLNMK
430 440 450 460 470 480
490 500 510 520 530
pF1KB5 CKNVVPVYDLLLEMLNAHVLRGCKSSITGSECSPAEDSKSKEGSQNPQSQ
::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CKNVVPVYDLLLEMLNAHVLRGCKSSITGSECSPAEDSKSKEGSQNPQSQ
490 500 510 520 530
>>XP_016876572 (OMIM: 601663,618187) estrogen receptor b (530 aa)
initn: 3612 init1: 3612 opt: 3612 Z-score: 3538.0 bits: 664.3 E(92320): 2.7e-190
Smith-Waterman score: 3612; 100.0% identity (100.0% similar) in 530 aa overlap (1-530:1-530)
10 20 30 40 50 60
pF1KB5 MDIKNSPSSLNSPSSYNCSQSILPLEHGSIYIPSSYVDSHHEYPAMTFYSPAVMNYSIPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDIKNSPSSLNSPSSYNCSQSILPLEHGSIYIPSSYVDSHHEYPAMTFYSPAVMNYSIPS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 NVTNLEGGPGRQTTSPNVLWPTPGHLSPLVVHRQLSHLYAEPQKSPWCEARSLEHTLPVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NVTNLEGGPGRQTTSPNVLWPTPGHLSPLVVHRQLSHLYAEPQKSPWCEARSLEHTLPVN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 RETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 NDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 CAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 LADKELVHMISWAKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIFAPDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LADKELVHMISWAKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIFAPDL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 VLDRDEGKCVEGILEIFDMLLATTSRFRELKLQHKEYLCVKAMILLNSSMYPLVTATQDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLDRDEGKCVEGILEIFDMLLATTSRFRELKLQHKEYLCVKAMILLNSSMYPLVTATQDA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 DSSRKLAHLLNAVTDALVWVIAKSGISSQQQSMRLANLLMLLSHVRHASNKGMEHLLNMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DSSRKLAHLLNAVTDALVWVIAKSGISSQQQSMRLANLLMLLSHVRHASNKGMEHLLNMK
430 440 450 460 470 480
490 500 510 520 530
pF1KB5 CKNVVPVYDLLLEMLNAHVLRGCKSSITGSECSPAEDSKSKEGSQNPQSQ
::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CKNVVPVYDLLLEMLNAHVLRGCKSSITGSECSPAEDSKSKEGSQNPQSQ
490 500 510 520 530
>>XP_016876570 (OMIM: 601663,618187) estrogen receptor b (530 aa)
initn: 3612 init1: 3612 opt: 3612 Z-score: 3538.0 bits: 664.3 E(92320): 2.7e-190
Smith-Waterman score: 3612; 100.0% identity (100.0% similar) in 530 aa overlap (1-530:1-530)
10 20 30 40 50 60
pF1KB5 MDIKNSPSSLNSPSSYNCSQSILPLEHGSIYIPSSYVDSHHEYPAMTFYSPAVMNYSIPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDIKNSPSSLNSPSSYNCSQSILPLEHGSIYIPSSYVDSHHEYPAMTFYSPAVMNYSIPS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 NVTNLEGGPGRQTTSPNVLWPTPGHLSPLVVHRQLSHLYAEPQKSPWCEARSLEHTLPVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NVTNLEGGPGRQTTSPNVLWPTPGHLSPLVVHRQLSHLYAEPQKSPWCEARSLEHTLPVN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 RETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 NDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 CAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 LADKELVHMISWAKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIFAPDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LADKELVHMISWAKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIFAPDL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 VLDRDEGKCVEGILEIFDMLLATTSRFRELKLQHKEYLCVKAMILLNSSMYPLVTATQDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLDRDEGKCVEGILEIFDMLLATTSRFRELKLQHKEYLCVKAMILLNSSMYPLVTATQDA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 DSSRKLAHLLNAVTDALVWVIAKSGISSQQQSMRLANLLMLLSHVRHASNKGMEHLLNMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DSSRKLAHLLNAVTDALVWVIAKSGISSQQQSMRLANLLMLLSHVRHASNKGMEHLLNMK
430 440 450 460 470 480
490 500 510 520 530
pF1KB5 CKNVVPVYDLLLEMLNAHVLRGCKSSITGSECSPAEDSKSKEGSQNPQSQ
::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CKNVVPVYDLLLEMLNAHVLRGCKSSITGSECSPAEDSKSKEGSQNPQSQ
490 500 510 520 530
>>NP_001278641 (OMIM: 601663,618187) estrogen receptor b (495 aa)
initn: 3197 init1: 3197 opt: 3206 Z-score: 3141.6 bits: 590.9 E(92320): 3.3e-168
Smith-Waterman score: 3206; 96.7% identity (98.8% similar) in 489 aa overlap (1-486:1-489)
10 20 30 40 50 60
pF1KB5 MDIKNSPSSLNSPSSYNCSQSILPLEHGSIYIPSSYVDSHHEYPAMTFYSPAVMNYSIPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDIKNSPSSLNSPSSYNCSQSILPLEHGSIYIPSSYVDSHHEYPAMTFYSPAVMNYSIPS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 NVTNLEGGPGRQTTSPNVLWPTPGHLSPLVVHRQLSHLYAEPQKSPWCEARSLEHTLPVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NVTNLEGGPGRQTTSPNVLWPTPGHLSPLVVHRQLSHLYAEPQKSPWCEARSLEHTLPVN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 RETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 NDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 CAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 LADKELVHMISWAKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIFAPDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LADKELVHMISWAKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIFAPDL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 VLDRDEGKCVEGILEIFDMLLATTSRFRELKLQHKEYLCVKAMILLNSSMYPLVTATQDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VLDRDEGKCVEGILEIFDMLLATTSRFRELKLQHKEYLCVKAMILLNSSMYPLVTATQDA
370 380 390 400 410 420
430 440 450 460 470
pF1KB5 DSSRKLAHLLNAVTDALVWVIAKSGISSQQQSMRLANLLMLLSHVRHA-SNKGMEHL--L
:::::::::::::::::::::::::::::::::::::::::::::::: ..:. . : .
NP_001 DSSRKLAHLLNAVTDALVWVIAKSGISSQQQSMRLANLLMLLSHVRHARAEKASQTLTSF
430 440 450 460 470 480
480 490 500 510 520 530
pF1KB5 NMKCKNVVPVYDLLLEMLNAHVLRGCKSSITGSECSPAEDSKSKEGSQNPQSQ
.:: ....:
NP_001 GMKMETLLPEATMEQ
490
>>XP_016876573 (OMIM: 601663,618187) estrogen receptor b (495 aa)
initn: 3197 init1: 3197 opt: 3206 Z-score: 3141.6 bits: 590.9 E(92320): 3.3e-168
Smith-Waterman score: 3206; 96.7% identity (98.8% similar) in 489 aa overlap (1-486:1-489)
10 20 30 40 50 60
pF1KB5 MDIKNSPSSLNSPSSYNCSQSILPLEHGSIYIPSSYVDSHHEYPAMTFYSPAVMNYSIPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDIKNSPSSLNSPSSYNCSQSILPLEHGSIYIPSSYVDSHHEYPAMTFYSPAVMNYSIPS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 NVTNLEGGPGRQTTSPNVLWPTPGHLSPLVVHRQLSHLYAEPQKSPWCEARSLEHTLPVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NVTNLEGGPGRQTTSPNVLWPTPGHLSPLVVHRQLSHLYAEPQKSPWCEARSLEHTLPVN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 RETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 NDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 CAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 LADKELVHMISWAKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIFAPDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LADKELVHMISWAKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIFAPDL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 VLDRDEGKCVEGILEIFDMLLATTSRFRELKLQHKEYLCVKAMILLNSSMYPLVTATQDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLDRDEGKCVEGILEIFDMLLATTSRFRELKLQHKEYLCVKAMILLNSSMYPLVTATQDA
370 380 390 400 410 420
430 440 450 460 470
pF1KB5 DSSRKLAHLLNAVTDALVWVIAKSGISSQQQSMRLANLLMLLSHVRHA-SNKGMEHL--L
:::::::::::::::::::::::::::::::::::::::::::::::: ..:. . : .
XP_016 DSSRKLAHLLNAVTDALVWVIAKSGISSQQQSMRLANLLMLLSHVRHARAEKASQTLTSF
430 440 450 460 470 480
480 490 500 510 520 530
pF1KB5 NMKCKNVVPVYDLLLEMLNAHVLRGCKSSITGSECSPAEDSKSKEGSQNPQSQ
.:: ....:
XP_016 GMKMETLLPEATMEQ
490
>>NP_001278652 (OMIM: 601663,618187) estrogen receptor b (495 aa)
initn: 3197 init1: 3197 opt: 3206 Z-score: 3141.6 bits: 590.9 E(92320): 3.3e-168
Smith-Waterman score: 3206; 96.7% identity (98.8% similar) in 489 aa overlap (1-486:1-489)
10 20 30 40 50 60
pF1KB5 MDIKNSPSSLNSPSSYNCSQSILPLEHGSIYIPSSYVDSHHEYPAMTFYSPAVMNYSIPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDIKNSPSSLNSPSSYNCSQSILPLEHGSIYIPSSYVDSHHEYPAMTFYSPAVMNYSIPS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 NVTNLEGGPGRQTTSPNVLWPTPGHLSPLVVHRQLSHLYAEPQKSPWCEARSLEHTLPVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NVTNLEGGPGRQTTSPNVLWPTPGHLSPLVVHRQLSHLYAEPQKSPWCEARSLEHTLPVN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 RETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 NDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 CAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 LADKELVHMISWAKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIFAPDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LADKELVHMISWAKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIFAPDL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 VLDRDEGKCVEGILEIFDMLLATTSRFRELKLQHKEYLCVKAMILLNSSMYPLVTATQDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VLDRDEGKCVEGILEIFDMLLATTSRFRELKLQHKEYLCVKAMILLNSSMYPLVTATQDA
370 380 390 400 410 420
430 440 450 460 470
pF1KB5 DSSRKLAHLLNAVTDALVWVIAKSGISSQQQSMRLANLLMLLSHVRHA-SNKGMEHL--L
:::::::::::::::::::::::::::::::::::::::::::::::: ..:. . : .
NP_001 DSSRKLAHLLNAVTDALVWVIAKSGISSQQQSMRLANLLMLLSHVRHARAEKASQTLTSF
430 440 450 460 470 480
480 490 500 510 520 530
pF1KB5 NMKCKNVVPVYDLLLEMLNAHVLRGCKSSITGSECSPAEDSKSKEGSQNPQSQ
.:: ....:
NP_001 GMKMETLLPEATMEQ
490
>>NP_001035365 (OMIM: 601663,618187) estrogen receptor b (495 aa)
initn: 3197 init1: 3197 opt: 3206 Z-score: 3141.6 bits: 590.9 E(92320): 3.3e-168
Smith-Waterman score: 3206; 96.7% identity (98.8% similar) in 489 aa overlap (1-486:1-489)
10 20 30 40 50 60
pF1KB5 MDIKNSPSSLNSPSSYNCSQSILPLEHGSIYIPSSYVDSHHEYPAMTFYSPAVMNYSIPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDIKNSPSSLNSPSSYNCSQSILPLEHGSIYIPSSYVDSHHEYPAMTFYSPAVMNYSIPS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 NVTNLEGGPGRQTTSPNVLWPTPGHLSPLVVHRQLSHLYAEPQKSPWCEARSLEHTLPVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NVTNLEGGPGRQTTSPNVLWPTPGHLSPLVVHRQLSHLYAEPQKSPWCEARSLEHTLPVN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 RETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 NDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 CAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 LADKELVHMISWAKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIFAPDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LADKELVHMISWAKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIFAPDL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 VLDRDEGKCVEGILEIFDMLLATTSRFRELKLQHKEYLCVKAMILLNSSMYPLVTATQDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VLDRDEGKCVEGILEIFDMLLATTSRFRELKLQHKEYLCVKAMILLNSSMYPLVTATQDA
370 380 390 400 410 420
430 440 450 460 470
pF1KB5 DSSRKLAHLLNAVTDALVWVIAKSGISSQQQSMRLANLLMLLSHVRHA-SNKGMEHL--L
:::::::::::::::::::::::::::::::::::::::::::::::: ..:. . : .
NP_001 DSSRKLAHLLNAVTDALVWVIAKSGISSQQQSMRLANLLMLLSHVRHARAEKASQTLTSF
430 440 450 460 470 480
480 490 500 510 520 530
pF1KB5 NMKCKNVVPVYDLLLEMLNAHVLRGCKSSITGSECSPAEDSKSKEGSQNPQSQ
.:: ....:
NP_001 GMKMETLLPEATMEQ
490
530 residues in 1 query sequences
64369986 residues in 92320 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Oct 24 21:34:12 2019 done: Thu Oct 24 21:34:13 2019
Total Scan time: 4.840 Total Display time: 0.100
Function used was FASTA [36.3.4 Apr, 2011]