FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4172, 633 aa 1>>>pF1KE4172 633 - 633 aa - 633 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.1383+/-0.00114; mu= 11.2713+/- 0.068 mean_var=137.1666+/-28.889, 0's: 0 Z-trim(106.8): 94 B-trim: 37 in 1/50 Lambda= 0.109509 statistics sampled from 9099 (9192) to 9099 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.646), E-opt: 0.2 (0.282), width: 16 Scan time: 3.490 The best scores are: opt bits E(32554) CCDS33348.1 ZSWIM2 gene_id:151112|Hs108|chr2 ( 633) 4386 705.2 7e-203 >>CCDS33348.1 ZSWIM2 gene_id:151112|Hs108|chr2 (633 aa) initn: 4386 init1: 4386 opt: 4386 Z-score: 3755.9 bits: 705.2 E(32554): 7e-203 Smith-Waterman score: 4386; 100.0% identity (100.0% similar) in 633 aa overlap (1-633:1-633) 10 20 30 40 50 60 pF1KE4 MLRRGYKASERRRHLSERLSWHQDQALSSSIYLLREMGPTGFLLREEEPEYMDFRVFLGN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 MLRRGYKASERRRHLSERLSWHQDQALSSSIYLLREMGPTGFLLREEEPEYMDFRVFLGN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 PHVCNCSTFPKGGELCKHICWVLLKKFKLPRNHESALQLGLGEREISDLLRGIHRVQTPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 PHVCNCSTFPKGGELCKHICWVLLKKFKLPRNHESALQLGLGEREISDLLRGIHRVQTPQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 PGTNDENEHVEEDGYIKQKEIDSEDICSICQELLLEKKLPVTFCRFGCGNSIHIKCMKIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 PGTNDENEHVEEDGYIKQKEIDSEDICSICQELLLEKKLPVTFCRFGCGNSIHIKCMKIL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 ANYQSTSNTSMLKCPLCRKEFAPLKLILEEFKNSSKLVAAAEKERLDKHLGIPCNNCKQF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 ANYQSTSNTSMLKCPLCRKEFAPLKLILEEFKNSSKLVAAAEKERLDKHLGIPCNNCKQF 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 PIEGKCYKCTECIEYHLCQECFDSCCHLSHTFTFREKRNQKWRSLEKRADEVVKYIDTKN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 PIEGKCYKCTECIEYHLCQECFDSCCHLSHTFTFREKRNQKWRSLEKRADEVVKYIDTKN 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 EIEEKMSHFQEKQGQVYTPKHIVRSLPLQLITKNSKLLAPGYQCLLCLKAFHLGQHTRLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 EIEEKMSHFQEKQGQVYTPKHIVRSLPLQLITKNSKLLAPGYQCLLCLKAFHLGQHTRLL 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 PCTHKFHRKCIDNWLFHKCNSCPIDGQVIYNPLTWKNSAVNGQAHQSVSNRDIIHLSKQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 PCTHKFHRKCIDNWLFHKCNSCPIDGQVIYNPLTWKNSAVNGQAHQSVSNRDIIHLSKQK 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE4 EPDLFIPGTGLVLKQNRLGILPSIPQCNFDELNTPQSPKDAYENTTIDNLCSIKLDNSNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 EPDLFIPGTGLVLKQNRLGILPSIPQCNFDELNTPQSPKDAYENTTIDNLCSIKLDNSNS 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE4 KKLTYDYKISQHFPRYLQDLPTVSFGKIPSQTLLPPIVHKNIVCPTAMESPCISGKFHTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 KKLTYDYKISQHFPRYLQDLPTVSFGKIPSQTLLPPIVHKNIVCPTAMESPCISGKFHTS 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE4 LSRMTKGCKCNNHNLKKTPATKIREDNKRSTLLPEDFNLIVNWSTAKLSLSKRYSNCMGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 LSRMTKGCKCNNHNLKKTPATKIREDNKRSTLLPEDFNLIVNWSTAKLSLSKRYSNCMGE 550 560 570 580 590 600 610 620 630 pF1KE4 ITRKCSHLSRQPVSHSVNTKSTELSLIIEGVQL ::::::::::::::::::::::::::::::::: CCDS33 ITRKCSHLSRQPVSHSVNTKSTELSLIIEGVQL 610 620 630 633 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 17:23:53 2016 done: Mon Nov 7 17:23:53 2016 Total Scan time: 3.490 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]