FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4131, 475 aa 1>>>pF1KE4131 475 - 475 aa - 475 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.4181+/-0.00112; mu= 12.8850+/- 0.068 mean_var=95.5003+/-19.042, 0's: 0 Z-trim(104.9): 31 B-trim: 97 in 1/50 Lambda= 0.131242 statistics sampled from 8113 (8138) to 8113 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.615), E-opt: 0.2 (0.25), width: 16 Scan time: 3.060 The best scores are: opt bits E(32554) CCDS9886.1 TTC8 gene_id:123016|Hs108|chr14 ( 475) 3166 610.1 1.6e-174 CCDS9885.1 TTC8 gene_id:123016|Hs108|chr14 ( 505) 2203 427.8 1.3e-119 CCDS32137.1 TTC8 gene_id:123016|Hs108|chr14 ( 515) 2203 427.8 1.3e-119 CCDS73674.1 TTC8 gene_id:123016|Hs108|chr14 ( 531) 2071 402.8 4.4e-112 CCDS73675.1 TTC8 gene_id:123016|Hs108|chr14 ( 317) 2050 398.7 4.5e-111 >>CCDS9886.1 TTC8 gene_id:123016|Hs108|chr14 (475 aa) initn: 3166 init1: 3166 opt: 3166 Z-score: 3246.9 bits: 610.1 E(32554): 1.6e-174 Smith-Waterman score: 3166; 100.0% identity (100.0% similar) in 475 aa overlap (1-475:1-475) 10 20 30 40 50 60 pF1KE4 MSSEMEPLLLAWSYFRRRKFQLCADLCTQMLEKSPYDQAAWILKARALTEMVYIDEIDVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS98 MSSEMEPLLLAWSYFRRRKFQLCADLCTQMLEKSPYDQAAWILKARALTEMVYIDEIDVD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 QEGIAEMMLDENAIAQVPRPGTSLKLPGTNQTGGPSQAVRPITQAGRPITGFLRPSTQSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS98 QEGIAEMMLDENAIAQVPRPGTSLKLPGTNQTGGPSQAVRPITQAGRPITGFLRPSTQSG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 RPGTMEQAIRTPRTAYTARPITSSSGRFVRLGTALFEYIFHHENDVKTALDLAALSTEHS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS98 RPGTMEQAIRTPRTAYTARPITSSSGRFVRLGTALFEYIFHHENDVKTALDLAALSTEHS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 QYKDWWWKVQIGKCYYRLGMYREAEKQFKSALKQQEMVDTFLYLAKVYVSLDQPVTALNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS98 QYKDWWWKVQIGKCYYRLGMYREAEKQFKSALKQQEMVDTFLYLAKVYVSLDQPVTALNL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 FKQGLDKFPGEVTLLCGIARIYEEMNNMSSAAEYYKEVLKQDNTHVEAIACIGSNHFYSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS98 FKQGLDKFPGEVTLLCGIARIYEEMNNMSSAAEYYKEVLKQDNTHVEAIACIGSNHFYSD 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 QPEIALRFYRRLLQMGIYNGQLFNNLGLCCFYAQQYDMTLTSFERALSLAENEEEAADVW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS98 QPEIALRFYRRLLQMGIYNGQLFNNLGLCCFYAQQYDMTLTSFERALSLAENEEEAADVW 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 YNLGHVAVGIGDTNLAHQCFRLALVNNNNHAEAYNNLAVLEMRKGHVEQARALLQTASSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS98 YNLGHVAVGIGDTNLAHQCFRLALVNNNNHAEAYNNLAVLEMRKGHVEQARALLQTASSL 370 380 390 400 410 420 430 440 450 460 470 pF1KE4 APHMYEPHFNFATISDKIGDLQRSYVAAQKSEAAFPDHVDTQHLIKQLRQHFAML ::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS98 APHMYEPHFNFATISDKIGDLQRSYVAAQKSEAAFPDHVDTQHLIKQLRQHFAML 430 440 450 460 470 >>CCDS9885.1 TTC8 gene_id:123016|Hs108|chr14 (505 aa) initn: 2158 init1: 2158 opt: 2203 Z-score: 2261.0 bits: 427.8 E(32554): 1.3e-119 Smith-Waterman score: 3096; 94.1% identity (94.1% similar) in 505 aa overlap (1-475:1-505) 10 20 30 40 50 60 pF1KE4 MSSEMEPLLLAWSYFRRRKFQLCADLCTQMLEKSPYDQAAWILKARALTEMVYIDEIDVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS98 MSSEMEPLLLAWSYFRRRKFQLCADLCTQMLEKSPYDQAAWILKARALTEMVYIDEIDVD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 QEGIAEMMLDENAIAQVPRPGTSLKLPGTNQTGGPSQAVRPITQAGRPITGFLRPSTQSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS98 QEGIAEMMLDENAIAQVPRPGTSLKLPGTNQTGGPSQAVRPITQAGRPITGFLRPSTQSG 70 80 90 100 110 120 130 140 150 pF1KE4 RPGTMEQAIRTPRTAYTARPITSSSGRFVRLGTA-------------------------- :::::::::::::::::::::::::::::::::: CCDS98 RPGTMEQAIRTPRTAYTARPITSSSGRFVRLGTASMLTSPDGPFINLSRLNLTKYSQKPK 130 140 150 160 170 180 160 170 180 190 200 210 pF1KE4 ----LFEYIFHHENDVKTALDLAALSTEHSQYKDWWWKVQIGKCYYRLGMYREAEKQFKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS98 LAKALFEYIFHHENDVKTALDLAALSTEHSQYKDWWWKVQIGKCYYRLGMYREAEKQFKS 190 200 210 220 230 240 220 230 240 250 260 270 pF1KE4 ALKQQEMVDTFLYLAKVYVSLDQPVTALNLFKQGLDKFPGEVTLLCGIARIYEEMNNMSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS98 ALKQQEMVDTFLYLAKVYVSLDQPVTALNLFKQGLDKFPGEVTLLCGIARIYEEMNNMSS 250 260 270 280 290 300 280 290 300 310 320 330 pF1KE4 AAEYYKEVLKQDNTHVEAIACIGSNHFYSDQPEIALRFYRRLLQMGIYNGQLFNNLGLCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS98 AAEYYKEVLKQDNTHVEAIACIGSNHFYSDQPEIALRFYRRLLQMGIYNGQLFNNLGLCC 310 320 330 340 350 360 340 350 360 370 380 390 pF1KE4 FYAQQYDMTLTSFERALSLAENEEEAADVWYNLGHVAVGIGDTNLAHQCFRLALVNNNNH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS98 FYAQQYDMTLTSFERALSLAENEEEAADVWYNLGHVAVGIGDTNLAHQCFRLALVNNNNH 370 380 390 400 410 420 400 410 420 430 440 450 pF1KE4 AEAYNNLAVLEMRKGHVEQARALLQTASSLAPHMYEPHFNFATISDKIGDLQRSYVAAQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS98 AEAYNNLAVLEMRKGHVEQARALLQTASSLAPHMYEPHFNFATISDKIGDLQRSYVAAQK 430 440 450 460 470 480 460 470 pF1KE4 SEAAFPDHVDTQHLIKQLRQHFAML ::::::::::::::::::::::::: CCDS98 SEAAFPDHVDTQHLIKQLRQHFAML 490 500 >>CCDS32137.1 TTC8 gene_id:123016|Hs108|chr14 (515 aa) initn: 2502 init1: 2158 opt: 2203 Z-score: 2260.9 bits: 427.8 E(32554): 1.3e-119 Smith-Waterman score: 3015; 92.1% identity (92.1% similar) in 507 aa overlap (9-475:9-515) 10 20 30 40 50 pF1KE4 MSSEMEPLLLAWSYFRRRKFQLCADLCTQMLEKSPYDQ----------AAWILKARALTE :::::::::::::::::::::::::::::: :::::::::::: CCDS32 MSSEMEPLLLAWSYFRRRKFQLCADLCTQMLEKSPYDQEPDPELPVHQAAWILKARALTE 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE4 MVYIDEIDVDQEGIAEMMLDENAIAQVPRPGTSLKLPGTNQTGGPSQAVRPITQAGRPIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 MVYIDEIDVDQEGIAEMMLDENAIAQVPRPGTSLKLPGTNQTGGPSQAVRPITQAGRPIT 70 80 90 100 110 120 120 130 140 150 pF1KE4 GFLRPSTQSGRPGTMEQAIRTPRTAYTARPITSSSGRFVRLGTA---------------- :::::::::::::::::::::::::::::::::::::::::::: CCDS32 GFLRPSTQSGRPGTMEQAIRTPRTAYTARPITSSSGRFVRLGTASMLTSPDGPFINLSRL 130 140 150 160 170 180 160 170 180 190 200 pF1KE4 --------------LFEYIFHHENDVKTALDLAALSTEHSQYKDWWWKVQIGKCYYRLGM :::::::::::::::::::::::::::::::::::::::::::::: CCDS32 NLTKYSQKPKLAKALFEYIFHHENDVKTALDLAALSTEHSQYKDWWWKVQIGKCYYRLGM 190 200 210 220 230 240 210 220 230 240 250 260 pF1KE4 YREAEKQFKSALKQQEMVDTFLYLAKVYVSLDQPVTALNLFKQGLDKFPGEVTLLCGIAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 YREAEKQFKSALKQQEMVDTFLYLAKVYVSLDQPVTALNLFKQGLDKFPGEVTLLCGIAR 250 260 270 280 290 300 270 280 290 300 310 320 pF1KE4 IYEEMNNMSSAAEYYKEVLKQDNTHVEAIACIGSNHFYSDQPEIALRFYRRLLQMGIYNG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 IYEEMNNMSSAAEYYKEVLKQDNTHVEAIACIGSNHFYSDQPEIALRFYRRLLQMGIYNG 310 320 330 340 350 360 330 340 350 360 370 380 pF1KE4 QLFNNLGLCCFYAQQYDMTLTSFERALSLAENEEEAADVWYNLGHVAVGIGDTNLAHQCF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 QLFNNLGLCCFYAQQYDMTLTSFERALSLAENEEEAADVWYNLGHVAVGIGDTNLAHQCF 370 380 390 400 410 420 390 400 410 420 430 440 pF1KE4 RLALVNNNNHAEAYNNLAVLEMRKGHVEQARALLQTASSLAPHMYEPHFNFATISDKIGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 RLALVNNNNHAEAYNNLAVLEMRKGHVEQARALLQTASSLAPHMYEPHFNFATISDKIGD 430 440 450 460 470 480 450 460 470 pF1KE4 LQRSYVAAQKSEAAFPDHVDTQHLIKQLRQHFAML ::::::::::::::::::::::::::::::::::: CCDS32 LQRSYVAAQKSEAAFPDHVDTQHLIKQLRQHFAML 490 500 510 >>CCDS73674.1 TTC8 gene_id:123016|Hs108|chr14 (531 aa) initn: 3061 init1: 2055 opt: 2071 Z-score: 2125.6 bits: 402.8 E(32554): 4.4e-112 Smith-Waterman score: 2867; 89.0% identity (89.0% similar) in 507 aa overlap (25-475:25-531) 10 20 30 40 50 60 pF1KE4 MSSEMEPLLLAWSYFRRRKFQLCADLCTQMLEKSPYDQAAWILKARALTEMVYIDEIDVD :::::::::::::::::::::::::::::::::::: CCDS73 MSSEMEPLLLAWSYFRRRKFQLCADLCTQMLEKSPYDQAAWILKARALTEMVYIDEIDVD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 QEGIAEMMLDENAIAQVPRPGTSLKLPGTNQTGGPSQAVRPITQAGRPITGFLRPSTQSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 QEGIAEMMLDENAIAQVPRPGTSLKLPGTNQTGGPSQAVRPITQAGRPITGFLRPSTQSG 70 80 90 100 110 120 130 140 150 pF1KE4 RPGTMEQAIRTPRTAYTARPITSSSGRFVRLGTA-------------------------- :::::::::::::::::::::::::::::::::: CCDS73 RPGTMEQAIRTPRTAYTARPITSSSGRFVRLGTASMLTSPDGPFINLSRLNLTKYSQKPK 130 140 150 160 170 180 160 170 180 pF1KE4 ----LFEYIFHHENDVKT--------------------------ALDLAALSTEHSQYKD :::::::::::::: :::::::::::::::: CCDS73 LAKALFEYIFHHENDVKTIHLEDVVLHLGIYPFLLRNKNHIEKNALDLAALSTEHSQYKD 190 200 210 220 230 240 190 200 210 220 230 240 pF1KE4 WWWKVQIGKCYYRLGMYREAEKQFKSALKQQEMVDTFLYLAKVYVSLDQPVTALNLFKQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 WWWKVQIGKCYYRLGMYREAEKQFKSALKQQEMVDTFLYLAKVYVSLDQPVTALNLFKQG 250 260 270 280 290 300 250 260 270 280 290 300 pF1KE4 LDKFPGEVTLLCGIARIYEEMNNMSSAAEYYKEVLKQDNTHVEAIACIGSNHFYSDQPEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 LDKFPGEVTLLCGIARIYEEMNNMSSAAEYYKEVLKQDNTHVEAIACIGSNHFYSDQPEI 310 320 330 340 350 360 310 320 330 340 350 360 pF1KE4 ALRFYRRLLQMGIYNGQLFNNLGLCCFYAQQYDMTLTSFERALSLAENEEEAADVWYNLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 ALRFYRRLLQMGIYNGQLFNNLGLCCFYAQQYDMTLTSFERALSLAENEEEAADVWYNLG 370 380 390 400 410 420 370 380 390 400 410 420 pF1KE4 HVAVGIGDTNLAHQCFRLALVNNNNHAEAYNNLAVLEMRKGHVEQARALLQTASSLAPHM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 HVAVGIGDTNLAHQCFRLALVNNNNHAEAYNNLAVLEMRKGHVEQARALLQTASSLAPHM 430 440 450 460 470 480 430 440 450 460 470 pF1KE4 YEPHFNFATISDKIGDLQRSYVAAQKSEAAFPDHVDTQHLIKQLRQHFAML ::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 YEPHFNFATISDKIGDLQRSYVAAQKSEAAFPDHVDTQHLIKQLRQHFAML 490 500 510 520 530 >>CCDS73675.1 TTC8 gene_id:123016|Hs108|chr14 (317 aa) initn: 2049 init1: 2049 opt: 2050 Z-score: 2107.5 bits: 398.7 E(32554): 4.5e-111 Smith-Waterman score: 2050; 96.9% identity (97.5% similar) in 320 aa overlap (156-475:5-317) 130 140 150 160 170 180 pF1KE4 EQAIRTPRTAYTARPITSSSGRFVRLGTALFEYIFHHENDVKTALDLAALSTEHSQYKDW .: :.: ::::::::::::::::: CCDS73 MILSYEVILH-------ALDLAALSTEHSQYKDW 10 20 190 200 210 220 230 240 pF1KE4 WWKVQIGKCYYRLGMYREAEKQFKSALKQQEMVDTFLYLAKVYVSLDQPVTALNLFKQGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 WWKVQIGKCYYRLGMYREAEKQFKSALKQQEMVDTFLYLAKVYVSLDQPVTALNLFKQGL 30 40 50 60 70 80 250 260 270 280 290 300 pF1KE4 DKFPGEVTLLCGIARIYEEMNNMSSAAEYYKEVLKQDNTHVEAIACIGSNHFYSDQPEIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 DKFPGEVTLLCGIARIYEEMNNMSSAAEYYKEVLKQDNTHVEAIACIGSNHFYSDQPEIA 90 100 110 120 130 140 310 320 330 340 350 360 pF1KE4 LRFYRRLLQMGIYNGQLFNNLGLCCFYAQQYDMTLTSFERALSLAENEEEAADVWYNLGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 LRFYRRLLQMGIYNGQLFNNLGLCCFYAQQYDMTLTSFERALSLAENEEEAADVWYNLGH 150 160 170 180 190 200 370 380 390 400 410 420 pF1KE4 VAVGIGDTNLAHQCFRLALVNNNNHAEAYNNLAVLEMRKGHVEQARALLQTASSLAPHMY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 VAVGIGDTNLAHQCFRLALVNNNNHAEAYNNLAVLEMRKGHVEQARALLQTASSLAPHMY 210 220 230 240 250 260 430 440 450 460 470 pF1KE4 EPHFNFATISDKIGDLQRSYVAAQKSEAAFPDHVDTQHLIKQLRQHFAML :::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 EPHFNFATISDKIGDLQRSYVAAQKSEAAFPDHVDTQHLIKQLRQHFAML 270 280 290 300 310 475 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 17:12:39 2016 done: Mon Nov 7 17:12:40 2016 Total Scan time: 3.060 Total Display time: 0.040 Function used was FASTA [36.3.4 Apr, 2011]