FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB9752, 607 aa 1>>>pF1KB9752 607 - 607 aa - 607 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.1092+/-0.000364; mu= 8.9043+/- 0.023 mean_var=207.9438+/-41.521, 0's: 0 Z-trim(120.9): 79 B-trim: 0 in 0/58 Lambda= 0.088941 statistics sampled from 36719 (36800) to 36719 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.746), E-opt: 0.2 (0.431), width: 16 Scan time: 8.680 The best scores are: opt bits E(85289) NP_001073977 (OMIM: 143100,143400,604613) T-box tr ( 607) 4083 536.6 9e-152 XP_016866961 (OMIM: 143100,143400,604613) PREDICTE ( 449) 3018 399.9 9.9e-111 XP_011534551 (OMIM: 143100,143400,604613) PREDICTE ( 372) 2424 323.6 7.6e-88 XP_016866962 (OMIM: 143100,143400,604613) PREDICTE ( 376) 2424 323.6 7.7e-88 XP_006715665 (OMIM: 143100,143400,604613) PREDICTE ( 364) 2419 322.9 1.2e-87 XP_011534550 (OMIM: 143100,143400,604613) PREDICTE ( 377) 2418 322.8 1.3e-87 XP_011534549 (OMIM: 143100,143400,604613) PREDICTE ( 379) 2416 322.5 1.6e-87 NP_001317606 (OMIM: 260660,604127) T-box transcrip ( 602) 1557 212.5 3.3e-54 NP_689593 (OMIM: 260660,604127) T-box transcriptio ( 496) 1555 212.2 3.5e-54 XP_005271218 (OMIM: 260660,604127) PREDICTED: T-bo ( 635) 1391 191.2 8.9e-48 NP_058650 (OMIM: 300307,302905,303400) T-box trans ( 520) 1210 167.9 7.6e-41 NP_001103348 (OMIM: 300307,302905,303400) T-box tr ( 520) 1210 167.9 7.6e-41 XP_005262193 (OMIM: 300307,302905,303400) PREDICTE ( 521) 1207 167.5 9.9e-41 XP_006724720 (OMIM: 300307,302905,303400) PREDICTE ( 350) 1092 152.6 2.1e-36 XP_011529274 (OMIM: 300307,302905,303400) PREDICTE ( 400) 1044 146.5 1.6e-34 NP_001290404 (OMIM: 300307,302905,303400) T-box tr ( 400) 1044 146.5 1.6e-34 NP_001103349 (OMIM: 300307,302905,303400) T-box tr ( 400) 1044 146.5 1.6e-34 NP_001071121 (OMIM: 606061,611363) T-box transcrip ( 447) 947 134.1 9.8e-31 NP_001159692 (OMIM: 606061,611363) T-box transcrip ( 297) 902 128.2 4e-29 XP_016884414 (OMIM: 187500,188400,192430,217095,60 ( 545) 847 121.4 8.2e-27 NP_542378 (OMIM: 187500,188400,192430,217095,60205 ( 495) 846 121.2 8.4e-27 XP_016884415 (OMIM: 187500,188400,192430,217095,60 ( 495) 846 121.2 8.4e-27 XP_006724375 (OMIM: 187500,188400,192430,217095,60 ( 495) 846 121.2 8.4e-27 XP_016884417 (OMIM: 187500,188400,192430,217095,60 ( 448) 836 119.9 1.9e-26 NP_542377 (OMIM: 187500,188400,192430,217095,60205 ( 398) 835 119.7 1.9e-26 NP_005983 (OMIM: 187500,188400,192430,217095,60205 ( 372) 834 119.5 2e-26 XP_011523792 (OMIM: 147891,601719) PREDICTED: T-bo ( 609) 819 117.8 1.1e-25 XP_011523797 (OMIM: 147891,601719) PREDICTED: T-bo ( 417) 811 116.6 1.7e-25 XP_011523793 (OMIM: 147891,601719) PREDICTED: T-bo ( 608) 812 116.9 2e-25 NP_005986 (OMIM: 604648) T-box transcription facto ( 385) 805 115.8 2.7e-25 XP_011543294 (OMIM: 604648) PREDICTED: T-box trans ( 430) 805 115.9 2.9e-25 XP_016879103 (OMIM: 122600,602427) PREDICTED: T-bo ( 436) 800 115.2 4.6e-25 NP_004599 (OMIM: 122600,602427) T-box transcriptio ( 436) 800 115.2 4.6e-25 XP_011544228 (OMIM: 122600,602427) PREDICTED: T-bo ( 436) 800 115.2 4.6e-25 XP_005255580 (OMIM: 122600,602427) PREDICTED: T-bo ( 436) 800 115.2 4.6e-25 NP_001308049 (OMIM: 147891,601719) T-box transcrip ( 546) 793 114.4 1e-24 XP_016875401 (OMIM: 142900,601620) PREDICTED: T-bo ( 534) 788 113.8 1.5e-24 NP_060958 (OMIM: 147891,601719) T-box transcriptio ( 545) 786 113.5 1.9e-24 NP_005985 (OMIM: 600747) T-box transcription facto ( 712) 784 113.4 2.7e-24 NP_852259 (OMIM: 142900,601620) T-box transcriptio ( 518) 766 111.0 1.1e-23 NP_000183 (OMIM: 142900,601620) T-box transcriptio ( 518) 766 111.0 1.1e-23 NP_005987 (OMIM: 181450,601621) T-box transcriptio ( 723) 764 110.8 1.6e-23 NP_542448 (OMIM: 142900,601620) T-box transcriptio ( 468) 745 108.2 6.4e-23 XP_016877522 (OMIM: 616061) PREDICTED: MAX gene-as (1439) 687 101.2 2.5e-20 XP_011519703 (OMIM: 616061) PREDICTED: MAX gene-as (1549) 687 101.3 2.7e-20 XP_016877519 (OMIM: 616061) PREDICTED: MAX gene-as (2207) 687 101.4 3.4e-20 NP_001074010 (OMIM: 616061) MAX gene-associated pr (2856) 687 101.5 4.1e-20 XP_005254310 (OMIM: 616061) PREDICTED: MAX gene-as (2906) 687 101.5 4.2e-20 XP_005254309 (OMIM: 616061) PREDICTED: MAX gene-as (2956) 687 101.5 4.2e-20 XP_011519700 (OMIM: 616061) PREDICTED: MAX gene-as (3004) 687 101.5 4.3e-20 >>NP_001073977 (OMIM: 143100,143400,604613) T-box transc (607 aa) initn: 4083 init1: 4083 opt: 4083 Z-score: 2845.8 bits: 536.6 E(85289): 9e-152 Smith-Waterman score: 4083; 99.8% identity (99.8% similar) in 607 aa overlap (1-607:1-607) 10 20 30 40 50 60 pF1KB9 MAEKRRGSPCSMLSLKAHAFSVEALIGAEKQQQLQKKRRKLGAEEAARAVDDGGCSRGGG ::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::: NP_001 MAEKRRGSPCSMLSLKAHAFSVEALIGAEKQQQLQKKRRKLGAEEAAGAVDDGGCSRGGG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB9 AGEKGSSEGDEGAALPPPAGATSGPARSGADLERGAAGGCEDGFQQGASPLASPGGSPKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 AGEKGSSEGDEGAALPPPAGATSGPARSGADLERGAAGGCEDGFQQGASPLASPGGSPKG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB9 SPARSLARPGTPLPSPQAPRVDLQGAELWKRFHEIGTEMIITKAGRRMFPAMRVKISGLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SPARSLARPGTPLPSPQAPRVDLQGAELWKRFHEIGTEMIITKAGRRMFPAMRVKISGLD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB9 PHQQYYIAMDIVPVDNKRYRYVYHSSKWMVAGNADSPVPPRVYIHPDSPASGETWMRQVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PHQQYYIAMDIVPVDNKRYRYVYHSSKWMVAGNADSPVPPRVYIHPDSPASGETWMRQVI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB9 SFDKLKLTNNELDDQGHIILHSMHKYQPRVHVIRKDCGDDLSPIKPVPSGEGVKAFSFPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SFDKLKLTNNELDDQGHIILHSMHKYQPRVHVIRKDCGDDLSPIKPVPSGEGVKAFSFPE 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB9 TVFTTVTAYQNQQITRLKIDRNPFAKGFRDSGRNRMGLEALVESYAFWRPSLRTLTFEDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TVFTTVTAYQNQQITRLKIDRNPFAKGFRDSGRNRMGLEALVESYAFWRPSLRTLTFEDI 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB9 PGIPKQGNASSSTLLQGTGNGVPATHPHLLSGSSCSSPAFHLGPNTSQLCSLAPADYSAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PGIPKQGNASSSTLLQGTGNGVPATHPHLLSGSSCSSPAFHLGPNTSQLCSLAPADYSAC 370 380 390 400 410 420 430 440 450 460 470 480 pF1KB9 ARSGLTLNRYSTSLAETYNRLTNQAGETFAPPRTPSYVGVSSSTSVNMSMGGTDGDTFSC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ARSGLTLNRYSTSLAETYNRLTNQAGETFAPPRTPSYVGVSSSTSVNMSMGGTDGDTFSC 430 440 450 460 470 480 490 500 510 520 530 540 pF1KB9 PQTSLSMQISGMSPQLQYIMPSPSSNAFATNQTHQGSYNTFRLHSPCALYGYNFSTSPKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PQTSLSMQISGMSPQLQYIMPSPSSNAFATNQTHQGSYNTFRLHSPCALYGYNFSTSPKL 490 500 510 520 530 540 550 560 570 580 590 600 pF1KB9 AASPEKIVSSQGSFLGSSPSGTMTDRQMLPPVEGVHLLSSGGQQSFFDSRTLGSLTLSSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 AASPEKIVSSQGSFLGSSPSGTMTDRQMLPPVEGVHLLSSGGQQSFFDSRTLGSLTLSSS 550 560 570 580 590 600 pF1KB9 QVSAHMV ::::::: NP_001 QVSAHMV >>XP_016866961 (OMIM: 143100,143400,604613) PREDICTED: T (449 aa) initn: 3018 init1: 3018 opt: 3018 Z-score: 2108.9 bits: 399.9 E(85289): 9.9e-111 Smith-Waterman score: 3018; 100.0% identity (100.0% similar) in 449 aa overlap (159-607:1-449) 130 140 150 160 170 180 pF1KB9 PGTPLPSPQAPRVDLQGAELWKRFHEIGTEMIITKAGRRMFPAMRVKISGLDPHQQYYIA :::::::::::::::::::::::::::::: XP_016 MIITKAGRRMFPAMRVKISGLDPHQQYYIA 10 20 30 190 200 210 220 230 240 pF1KB9 MDIVPVDNKRYRYVYHSSKWMVAGNADSPVPPRVYIHPDSPASGETWMRQVISFDKLKLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MDIVPVDNKRYRYVYHSSKWMVAGNADSPVPPRVYIHPDSPASGETWMRQVISFDKLKLT 40 50 60 70 80 90 250 260 270 280 290 300 pF1KB9 NNELDDQGHIILHSMHKYQPRVHVIRKDCGDDLSPIKPVPSGEGVKAFSFPETVFTTVTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 NNELDDQGHIILHSMHKYQPRVHVIRKDCGDDLSPIKPVPSGEGVKAFSFPETVFTTVTA 100 110 120 130 140 150 310 320 330 340 350 360 pF1KB9 YQNQQITRLKIDRNPFAKGFRDSGRNRMGLEALVESYAFWRPSLRTLTFEDIPGIPKQGN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 YQNQQITRLKIDRNPFAKGFRDSGRNRMGLEALVESYAFWRPSLRTLTFEDIPGIPKQGN 160 170 180 190 200 210 370 380 390 400 410 420 pF1KB9 ASSSTLLQGTGNGVPATHPHLLSGSSCSSPAFHLGPNTSQLCSLAPADYSACARSGLTLN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ASSSTLLQGTGNGVPATHPHLLSGSSCSSPAFHLGPNTSQLCSLAPADYSACARSGLTLN 220 230 240 250 260 270 430 440 450 460 470 480 pF1KB9 RYSTSLAETYNRLTNQAGETFAPPRTPSYVGVSSSTSVNMSMGGTDGDTFSCPQTSLSMQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RYSTSLAETYNRLTNQAGETFAPPRTPSYVGVSSSTSVNMSMGGTDGDTFSCPQTSLSMQ 280 290 300 310 320 330 490 500 510 520 530 540 pF1KB9 ISGMSPQLQYIMPSPSSNAFATNQTHQGSYNTFRLHSPCALYGYNFSTSPKLAASPEKIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ISGMSPQLQYIMPSPSSNAFATNQTHQGSYNTFRLHSPCALYGYNFSTSPKLAASPEKIV 340 350 360 370 380 390 550 560 570 580 590 600 pF1KB9 SSQGSFLGSSPSGTMTDRQMLPPVEGVHLLSSGGQQSFFDSRTLGSLTLSSSQVSAHMV ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SSQGSFLGSSPSGTMTDRQMLPPVEGVHLLSSGGQQSFFDSRTLGSLTLSSSQVSAHMV 400 410 420 430 440 >>XP_011534551 (OMIM: 143100,143400,604613) PREDICTED: T (372 aa) initn: 2424 init1: 2424 opt: 2424 Z-score: 1698.1 bits: 323.6 E(85289): 7.6e-88 Smith-Waterman score: 2424; 99.7% identity (99.7% similar) in 356 aa overlap (12-367:1-356) 10 20 30 40 50 60 pF1KB9 MAEKRRGSPCSMLSLKAHAFSVEALIGAEKQQQLQKKRRKLGAEEAARAVDDGGCSRGGG :::::::::::::::::::::::::::::::::::: :::::::::::: XP_011 MLSLKAHAFSVEALIGAEKQQQLQKKRRKLGAEEAAGAVDDGGCSRGGG 10 20 30 40 70 80 90 100 110 120 pF1KB9 AGEKGSSEGDEGAALPPPAGATSGPARSGADLERGAAGGCEDGFQQGASPLASPGGSPKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 AGEKGSSEGDEGAALPPPAGATSGPARSGADLERGAAGGCEDGFQQGASPLASPGGSPKG 50 60 70 80 90 100 130 140 150 160 170 180 pF1KB9 SPARSLARPGTPLPSPQAPRVDLQGAELWKRFHEIGTEMIITKAGRRMFPAMRVKISGLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 SPARSLARPGTPLPSPQAPRVDLQGAELWKRFHEIGTEMIITKAGRRMFPAMRVKISGLD 110 120 130 140 150 160 190 200 210 220 230 240 pF1KB9 PHQQYYIAMDIVPVDNKRYRYVYHSSKWMVAGNADSPVPPRVYIHPDSPASGETWMRQVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 PHQQYYIAMDIVPVDNKRYRYVYHSSKWMVAGNADSPVPPRVYIHPDSPASGETWMRQVI 170 180 190 200 210 220 250 260 270 280 290 300 pF1KB9 SFDKLKLTNNELDDQGHIILHSMHKYQPRVHVIRKDCGDDLSPIKPVPSGEGVKAFSFPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 SFDKLKLTNNELDDQGHIILHSMHKYQPRVHVIRKDCGDDLSPIKPVPSGEGVKAFSFPE 230 240 250 260 270 280 310 320 330 340 350 360 pF1KB9 TVFTTVTAYQNQQITRLKIDRNPFAKGFRDSGRNRMGLEALVESYAFWRPSLRTLTFEDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 TVFTTVTAYQNQQITRLKIDRNPFAKGFRDSGRNRMGLEALVESYAFWRPSLRTLTFEDI 290 300 310 320 330 340 370 380 390 400 410 420 pF1KB9 PGIPKQGNASSSTLLQGTGNGVPATHPHLLSGSSCSSPAFHLGPNTSQLCSLAPADYSAC ::::::: XP_011 PGIPKQGCQRIQALQSQLRCAEC 350 360 370 >>XP_016866962 (OMIM: 143100,143400,604613) PREDICTED: T (376 aa) initn: 2471 init1: 2424 opt: 2424 Z-score: 1698.0 bits: 323.6 E(85289): 7.7e-88 Smith-Waterman score: 2424; 97.8% identity (99.2% similar) in 363 aa overlap (12-374:1-363) 10 20 30 40 50 60 pF1KB9 MAEKRRGSPCSMLSLKAHAFSVEALIGAEKQQQLQKKRRKLGAEEAARAVDDGGCSRGGG :::::::::::::::::::::::::::::::::::: :::::::::::: XP_016 MLSLKAHAFSVEALIGAEKQQQLQKKRRKLGAEEAAGAVDDGGCSRGGG 10 20 30 40 70 80 90 100 110 120 pF1KB9 AGEKGSSEGDEGAALPPPAGATSGPARSGADLERGAAGGCEDGFQQGASPLASPGGSPKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 AGEKGSSEGDEGAALPPPAGATSGPARSGADLERGAAGGCEDGFQQGASPLASPGGSPKG 50 60 70 80 90 100 130 140 150 160 170 180 pF1KB9 SPARSLARPGTPLPSPQAPRVDLQGAELWKRFHEIGTEMIITKAGRRMFPAMRVKISGLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SPARSLARPGTPLPSPQAPRVDLQGAELWKRFHEIGTEMIITKAGRRMFPAMRVKISGLD 110 120 130 140 150 160 190 200 210 220 230 240 pF1KB9 PHQQYYIAMDIVPVDNKRYRYVYHSSKWMVAGNADSPVPPRVYIHPDSPASGETWMRQVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 PHQQYYIAMDIVPVDNKRYRYVYHSSKWMVAGNADSPVPPRVYIHPDSPASGETWMRQVI 170 180 190 200 210 220 250 260 270 280 290 300 pF1KB9 SFDKLKLTNNELDDQGHIILHSMHKYQPRVHVIRKDCGDDLSPIKPVPSGEGVKAFSFPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SFDKLKLTNNELDDQGHIILHSMHKYQPRVHVIRKDCGDDLSPIKPVPSGEGVKAFSFPE 230 240 250 260 270 280 310 320 330 340 350 360 pF1KB9 TVFTTVTAYQNQQITRLKIDRNPFAKGFRDSGRNRMGLEALVESYAFWRPSLRTLTFEDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TVFTTVTAYQNQQITRLKIDRNPFAKGFRDSGRNRMGLEALVESYAFWRPSLRTLTFEDI 290 300 310 320 330 340 370 380 390 400 410 420 pF1KB9 PGIPKQGNASSSTLLQGTGNGVPATHPHLLSGSSCSSPAFHLGPNTSQLCSLAPADYSAC :::::: .. .:.. XP_016 PGIPKQDDTLTSAMTVDNHHDNNWKKS 350 360 370 >>XP_006715665 (OMIM: 143100,143400,604613) PREDICTED: T (364 aa) initn: 2466 init1: 2419 opt: 2419 Z-score: 1694.7 bits: 322.9 E(85289): 1.2e-87 Smith-Waterman score: 2419; 98.9% identity (99.2% similar) in 359 aa overlap (12-370:1-359) 10 20 30 40 50 60 pF1KB9 MAEKRRGSPCSMLSLKAHAFSVEALIGAEKQQQLQKKRRKLGAEEAARAVDDGGCSRGGG :::::::::::::::::::::::::::::::::::: :::::::::::: XP_006 MLSLKAHAFSVEALIGAEKQQQLQKKRRKLGAEEAAGAVDDGGCSRGGG 10 20 30 40 70 80 90 100 110 120 pF1KB9 AGEKGSSEGDEGAALPPPAGATSGPARSGADLERGAAGGCEDGFQQGASPLASPGGSPKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 AGEKGSSEGDEGAALPPPAGATSGPARSGADLERGAAGGCEDGFQQGASPLASPGGSPKG 50 60 70 80 90 100 130 140 150 160 170 180 pF1KB9 SPARSLARPGTPLPSPQAPRVDLQGAELWKRFHEIGTEMIITKAGRRMFPAMRVKISGLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 SPARSLARPGTPLPSPQAPRVDLQGAELWKRFHEIGTEMIITKAGRRMFPAMRVKISGLD 110 120 130 140 150 160 190 200 210 220 230 240 pF1KB9 PHQQYYIAMDIVPVDNKRYRYVYHSSKWMVAGNADSPVPPRVYIHPDSPASGETWMRQVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 PHQQYYIAMDIVPVDNKRYRYVYHSSKWMVAGNADSPVPPRVYIHPDSPASGETWMRQVI 170 180 190 200 210 220 250 260 270 280 290 300 pF1KB9 SFDKLKLTNNELDDQGHIILHSMHKYQPRVHVIRKDCGDDLSPIKPVPSGEGVKAFSFPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 SFDKLKLTNNELDDQGHIILHSMHKYQPRVHVIRKDCGDDLSPIKPVPSGEGVKAFSFPE 230 240 250 260 270 280 310 320 330 340 350 360 pF1KB9 TVFTTVTAYQNQQITRLKIDRNPFAKGFRDSGRNRMGLEALVESYAFWRPSLRTLTFEDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 TVFTTVTAYQNQQITRLKIDRNPFAKGFRDSGRNRMGLEALVESYAFWRPSLRTLTFEDI 290 300 310 320 330 340 370 380 390 400 410 420 pF1KB9 PGIPKQGNASSSTLLQGTGNGVPATHPHLLSGSSCSSPAFHLGPNTSQLCSLAPADYSAC :::::: :. XP_006 PGIPKQERATIGWNA 350 360 >>XP_011534550 (OMIM: 143100,143400,604613) PREDICTED: T (377 aa) initn: 2465 init1: 2418 opt: 2418 Z-score: 1693.8 bits: 322.8 E(85289): 1.3e-87 Smith-Waterman score: 2418; 98.6% identity (98.9% similar) in 360 aa overlap (12-371:1-360) 10 20 30 40 50 60 pF1KB9 MAEKRRGSPCSMLSLKAHAFSVEALIGAEKQQQLQKKRRKLGAEEAARAVDDGGCSRGGG :::::::::::::::::::::::::::::::::::: :::::::::::: XP_011 MLSLKAHAFSVEALIGAEKQQQLQKKRRKLGAEEAAGAVDDGGCSRGGG 10 20 30 40 70 80 90 100 110 120 pF1KB9 AGEKGSSEGDEGAALPPPAGATSGPARSGADLERGAAGGCEDGFQQGASPLASPGGSPKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 AGEKGSSEGDEGAALPPPAGATSGPARSGADLERGAAGGCEDGFQQGASPLASPGGSPKG 50 60 70 80 90 100 130 140 150 160 170 180 pF1KB9 SPARSLARPGTPLPSPQAPRVDLQGAELWKRFHEIGTEMIITKAGRRMFPAMRVKISGLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 SPARSLARPGTPLPSPQAPRVDLQGAELWKRFHEIGTEMIITKAGRRMFPAMRVKISGLD 110 120 130 140 150 160 190 200 210 220 230 240 pF1KB9 PHQQYYIAMDIVPVDNKRYRYVYHSSKWMVAGNADSPVPPRVYIHPDSPASGETWMRQVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 PHQQYYIAMDIVPVDNKRYRYVYHSSKWMVAGNADSPVPPRVYIHPDSPASGETWMRQVI 170 180 190 200 210 220 250 260 270 280 290 300 pF1KB9 SFDKLKLTNNELDDQGHIILHSMHKYQPRVHVIRKDCGDDLSPIKPVPSGEGVKAFSFPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 SFDKLKLTNNELDDQGHIILHSMHKYQPRVHVIRKDCGDDLSPIKPVPSGEGVKAFSFPE 230 240 250 260 270 280 310 320 330 340 350 360 pF1KB9 TVFTTVTAYQNQQITRLKIDRNPFAKGFRDSGRNRMGLEALVESYAFWRPSLRTLTFEDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 TVFTTVTAYQNQQITRLKIDRNPFAKGFRDSGRNRMGLEALVESYAFWRPSLRTLTFEDI 290 300 310 320 330 340 370 380 390 400 410 420 pF1KB9 PGIPKQGNASSSTLLQGTGNGVPATHPHLLSGSSCSSPAFHLGPNTSQLCSLAPADYSAC :::::: . : XP_011 PGIPKQDGKHSPQGKNAPKMYSGELGPI 350 360 370 >>XP_011534549 (OMIM: 143100,143400,604613) PREDICTED: T (379 aa) initn: 2416 init1: 2416 opt: 2416 Z-score: 1692.4 bits: 322.5 E(85289): 1.6e-87 Smith-Waterman score: 2416; 99.7% identity (99.7% similar) in 355 aa overlap (12-366:1-355) 10 20 30 40 50 60 pF1KB9 MAEKRRGSPCSMLSLKAHAFSVEALIGAEKQQQLQKKRRKLGAEEAARAVDDGGCSRGGG :::::::::::::::::::::::::::::::::::: :::::::::::: XP_011 MLSLKAHAFSVEALIGAEKQQQLQKKRRKLGAEEAAGAVDDGGCSRGGG 10 20 30 40 70 80 90 100 110 120 pF1KB9 AGEKGSSEGDEGAALPPPAGATSGPARSGADLERGAAGGCEDGFQQGASPLASPGGSPKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 AGEKGSSEGDEGAALPPPAGATSGPARSGADLERGAAGGCEDGFQQGASPLASPGGSPKG 50 60 70 80 90 100 130 140 150 160 170 180 pF1KB9 SPARSLARPGTPLPSPQAPRVDLQGAELWKRFHEIGTEMIITKAGRRMFPAMRVKISGLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 SPARSLARPGTPLPSPQAPRVDLQGAELWKRFHEIGTEMIITKAGRRMFPAMRVKISGLD 110 120 130 140 150 160 190 200 210 220 230 240 pF1KB9 PHQQYYIAMDIVPVDNKRYRYVYHSSKWMVAGNADSPVPPRVYIHPDSPASGETWMRQVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 PHQQYYIAMDIVPVDNKRYRYVYHSSKWMVAGNADSPVPPRVYIHPDSPASGETWMRQVI 170 180 190 200 210 220 250 260 270 280 290 300 pF1KB9 SFDKLKLTNNELDDQGHIILHSMHKYQPRVHVIRKDCGDDLSPIKPVPSGEGVKAFSFPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 SFDKLKLTNNELDDQGHIILHSMHKYQPRVHVIRKDCGDDLSPIKPVPSGEGVKAFSFPE 230 240 250 260 270 280 310 320 330 340 350 360 pF1KB9 TVFTTVTAYQNQQITRLKIDRNPFAKGFRDSGRNRMGLEALVESYAFWRPSLRTLTFEDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 TVFTTVTAYQNQQITRLKIDRNPFAKGFRDSGRNRMGLEALVESYAFWRPSLRTLTFEDI 290 300 310 320 330 340 370 380 390 400 410 420 pF1KB9 PGIPKQGNASSSTLLQGTGNGVPATHPHLLSGSSCSSPAFHLGPNTSQLCSLAPADYSAC :::::: XP_011 PGIPKQEYRDLKTDYIFPERDNLVSRETKL 350 360 370 >>NP_001317606 (OMIM: 260660,604127) T-box transcription (602 aa) initn: 1866 init1: 1405 opt: 1557 Z-score: 1094.1 bits: 212.5 E(85289): 3.3e-54 Smith-Waterman score: 1991; 55.2% identity (73.7% similar) in 636 aa overlap (1-607:1-602) 10 20 30 40 50 60 pF1KB9 MAEKRRGSPCSMLSLKAHAFSVEALIGAEKQQQLQKKRRKLGAEEAARAVDDGGCSRGGG :.:.::.. :: .:::::::::::..:...:. ..: : . . .:.. .: : NP_001 MSERRRSA--VALSSRAHAFSVEALIGSNKKRKLRDWEEK-GLDLSMEALSPAG---PLG 10 20 30 40 50 70 80 90 100 110 120 pF1KB9 AGEKGSSEGDEGAALPPPAGATSGPARSGADLERGAAGGCEDGFQQGASPLASPGGSPKG : ....: : : : . : . : . :: . : .:. . ::: ...: NP_001 DTEDAAAHGLE----PHPDSEQSTGSDSEVLTERTS---C--SFSTH-TDLASGAAGP-- 60 70 80 90 100 130 140 150 160 170 180 pF1KB9 SPARSLARPGTPLPSPQAPRVDLQGAELWKRFHEIGTEMIITKAGRRMFPAMRVKISGLD :: . : . .:.:: :.::::::.::::::::::::::::::::::.::: NP_001 VPA--------AMSSMEEIQVELQCADLWKRFHDIGTEMIITKAGRRMFPAMRVKITGLD 110 120 130 140 150 190 200 210 220 230 240 pF1KB9 PHQQYYIAMDIVPVDNKRYRYVYHSSKWMVAGNADSPVPPRVYIHPDSPASGETWMRQVI :::::::::::::::::::::::::::::::::::::::::::::::: :::.::::::. NP_001 PHQQYYIAMDIVPVDNKRYRYVYHSSKWMVAGNADSPVPPRVYIHPDSLASGDTWMRQVV 160 170 180 190 200 210 250 260 270 280 290 300 pF1KB9 SFDKLKLTNNELDDQGHIILHSMHKYQPRVHVIRKDCGDDLSPIKPVPSGEGVKAFSFPE :::::::::::::::::::::::::::::::::::: ..:::: :::: :.:::.:.::: NP_001 SFDKLKLTNNELDDQGHIILHSMHKYQPRVHVIRKDFSSDLSPTKPVPVGDGVKTFNFPE 220 230 240 250 260 270 310 320 330 340 350 360 pF1KB9 TVFTTVTAYQNQQITRLKIDRNPFAKGFRDSGRNRMGLEALVESYAFWRPSLRTLTFEDI ::::::::::::::::::::::::::::::::::: ::::..:.:::::: .:::::::. NP_001 TVFTTVTAYQNQQITRLKIDRNPFAKGFRDSGRNRTGLEAIMETYAFWRPPVRTLTFEDF 280 290 300 310 320 330 370 380 390 400 410 pF1KB9 PGIPKQ--GNASSSTLLQGTGNGVPATHPHLLSGSSCSSPAFHLGPNT-------SQLCS . :: :....: ..::. :.. :::: ::: :.:::.::: ::::. NP_001 TTMQKQQGGSTGTSPTTSSTGTPSPSASSHLLS-PSCSPPTFHLAPNTFNVGCRESQLCN 340 350 360 370 380 390 420 430 440 450 460 pF1KB9 LAPADYSACARSGLTLNRYSTSLAET-YNRLTN------QAGETFAPPRTPSYV-GVSSS : .:: ::::... . .:... :::: . : .::: : :::: . :. . NP_001 LNLSDYPPCARSNMAALQSYPGLSDSGYNRLQSGTTSATQPSETFMPQRTPSLISGIPTP 400 410 420 430 440 450 470 480 490 500 510 pF1KB9 TSV--NMSM---GGTDGDTFSCPQTSLSMQISGMSPQLQYIMPSPSSNAFATNQTHQGSY :. : .: :: : .: : . :: .. . . : : . :. .. .:.:: NP_001 PSLPGNSKMEAYGGQLG-SFPTSQFQYVMQAGNAASS------SSSPHMFGGSHMQQSSY 460 470 480 490 500 520 530 540 550 560 570 pF1KB9 NTFRLHSPCALYGYNFSTSPKLAASPEKIVSSQGSFLGSSPS-GTMTDRQMLPP-VE-GV :.: ::.: :::::: :::.:::::::. .::...: :::: :.. .::.:: .: .. NP_001 NAFSLHNPYNLYGYNFPTSPRLAASPEKLSASQSTLLCSSPSNGAFGERQYLPSGMEHSM 510 520 530 540 550 560 580 590 600 pF1KB9 HLLSSG--GQQSF--FDSRTLGSLTLSSSQVSAHMV :..: . .::. :.: :.. ::::.:.::: NP_001 HMISPSPNNQQATNTCDGRQYGAVPGSSSQMSVHMV 570 580 590 600 >>NP_689593 (OMIM: 260660,604127) T-box transcription fa (496 aa) initn: 1758 init1: 1405 opt: 1555 Z-score: 1093.8 bits: 212.2 E(85289): 3.5e-54 Smith-Waterman score: 1897; 61.5% identity (78.4% similar) in 504 aa overlap (133-607:1-496) 110 120 130 140 150 160 pF1KB9 GFQQGASPLASPGGSPKGSPARSLARPGTPLPSPQAPRVDLQGAELWKRFHEIGTEMIIT . : . .:.:: :.::::::.:::::::: NP_689 MSSMEEIQVELQCADLWKRFHDIGTEMIIT 10 20 30 170 180 190 200 210 220 pF1KB9 KAGRRMFPAMRVKISGLDPHQQYYIAMDIVPVDNKRYRYVYHSSKWMVAGNADSPVPPRV ::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::: NP_689 KAGRRMFPAMRVKITGLDPHQQYYIAMDIVPVDNKRYRYVYHSSKWMVAGNADSPVPPRV 40 50 60 70 80 90 230 240 250 260 270 280 pF1KB9 YIHPDSPASGETWMRQVISFDKLKLTNNELDDQGHIILHSMHKYQPRVHVIRKDCGDDLS :::::: :::.::::::.:::::::::::::::::::::::::::::::::::: ..::: NP_689 YIHPDSLASGDTWMRQVVSFDKLKLTNNELDDQGHIILHSMHKYQPRVHVIRKDFSSDLS 100 110 120 130 140 150 290 300 310 320 330 340 pF1KB9 PIKPVPSGEGVKAFSFPETVFTTVTAYQNQQITRLKIDRNPFAKGFRDSGRNRMGLEALV : :::: :.:::.:.:::::::::::::::::::::::::::::::::::::: ::::.. NP_689 PTKPVPVGDGVKTFNFPETVFTTVTAYQNQQITRLKIDRNPFAKGFRDSGRNRTGLEAIM 160 170 180 190 200 210 350 360 370 380 390 400 pF1KB9 ESYAFWRPSLRTLTFEDIPGIPKQ--GNASSSTLLQGTGNGVPATHPHLLSGSSCSSPAF :.:::::: .:::::::. . :: :....: ..::. :.. :::: ::: :.: NP_689 ETYAFWRPPVRTLTFEDFTTMQKQQGGSTGTSPTTSSTGTPSPSASSHLLS-PSCSPPTF 220 230 240 250 260 410 420 430 440 pF1KB9 HLGPNT-------SQLCSLAPADYSACARSGLTLNRYSTSLAET-YNRLTN------QAG ::.::: ::::.: .:: ::::... . .:... :::: . : . NP_689 HLAPNTFNVGCRESQLCNLNLSDYPPCARSNMAALQSYPGLSDSGYNRLQSGTTSATQPS 270 280 290 300 310 320 450 460 470 480 490 500 pF1KB9 ETFAPPRTPSYV-GVSSSTSV--NMSM---GGTDGDTFSCPQTSLSMQISGMSPQLQYIM ::: : :::: . :. . :. : .: :: : .: : . :: .. . . NP_689 ETFMPQRTPSLISGIPTPPSLPGNSKMEAYGGQLG-SFPTSQFQYVMQAGNAASS----- 330 340 350 360 370 380 510 520 530 540 550 560 pF1KB9 PSPSSNAFATNQTHQGSYNTFRLHSPCALYGYNFSTSPKLAASPEKIVSSQGSFLGSSPS : : . :. .. .:.:::.: ::.: :::::: :::.:::::::. .::...: :::: NP_689 -SSSPHMFGGSHMQQSSYNAFSLHNPYNLYGYNFPTSPRLAASPEKLSASQSTLLCSSPS 390 400 410 420 430 440 570 580 590 600 pF1KB9 -GTMTDRQMLPP-VE-GVHLLSSG--GQQSF--FDSRTLGSLTLSSSQVSAHMV :.. .::.:: .: ..:..: . .::. :.: :.. ::::.:.::: NP_689 NGAFGERQYLPSGMEHSMHMISPSPNNQQATNTCDGRQYGAVPGSSSQMSVHMV 450 460 470 480 490 >>XP_005271218 (OMIM: 260660,604127) PREDICTED: T-box tr (635 aa) initn: 1911 init1: 1386 opt: 1391 Z-score: 978.7 bits: 191.2 E(85289): 8.9e-48 Smith-Waterman score: 1875; 53.1% identity (70.3% similar) in 637 aa overlap (1-579:1-603) 10 20 30 40 50 60 pF1KB9 MAEKRRGSPCSMLSLKAHAFSVEALIGAEKQQQLQKKRRKLGAEEAARAVDDGGCSRGGG :.:.::.. :: .:::::::::::..:...:. ..: : . . .:.. .: : XP_005 MSERRRSA--VALSSRAHAFSVEALIGSNKKRKLRDWEEK-GLDLSMEALSPAG---PLG 10 20 30 40 50 70 80 90 100 110 120 pF1KB9 AGEKGSSEGDEGAALPPPAGATSGPARSGADLERGAAGGCEDGFQQGASPLASPGGSPKG : ....: : : : . : . : . :: . : .:. . ::: ...: XP_005 DTEDAAAHGLE----PHPDSEQSTGSDSEVLTERTS---C--SFSTH-TDLASGAAGP-- 60 70 80 90 100 130 140 150 160 170 180 pF1KB9 SPARSLARPGTPLPSPQAPRVDLQGAELWKRFHEIGTEMIITKAGRRMFPAMRVKISGLD :: . : . .:.:: :.::::::.::::::::::::::::::::::.::: XP_005 VPA--------AMSSMEEIQVELQCADLWKRFHDIGTEMIITKAGRRMFPAMRVKITGLD 110 120 130 140 150 190 200 210 220 230 240 pF1KB9 PHQQYYIAMDIVPVDNKRYRYVYHSSKWMVAGNADSPVPPRVYIHPDSPASGETWMRQVI :::::::::::::::::::::::::::::::::::::::::::::::: :::.::::::. XP_005 PHQQYYIAMDIVPVDNKRYRYVYHSSKWMVAGNADSPVPPRVYIHPDSLASGDTWMRQVV 160 170 180 190 200 210 250 260 270 280 290 300 pF1KB9 SFDKLKLTNNELDDQGHIILHSMHKYQPRVHVIRKDCGDDLSPIKPVPSGEGVKAFSFPE :::::::::::::::::::::::::::::::::::: ..:::: :::: :.:::.:.::: XP_005 SFDKLKLTNNELDDQGHIILHSMHKYQPRVHVIRKDFSSDLSPTKPVPVGDGVKTFNFPE 220 230 240 250 260 270 310 320 330 340 350 360 pF1KB9 TVFTTVTAYQNQQITRLKIDRNPFAKGFRDSGRNRMGLEALVESYAFWRPSLRTLTFEDI ::::::::::::::::::::::::::::::::::: ::::..:.:::::: .:::::::. XP_005 TVFTTVTAYQNQQITRLKIDRNPFAKGFRDSGRNRTGLEAIMETYAFWRPPVRTLTFEDF 280 290 300 310 320 330 370 380 pF1KB9 PGIPKQ-----------------------------------GNASSSTLLQGTGNGVPAT . :: :....: ..::. :.. XP_005 TTMQKQQASKKTSQGYTVNQHSSETDAIELYERRVWLMERRGSTGTSPTTSSTGTPSPSA 340 350 360 370 380 390 390 400 410 420 430 pF1KB9 HPHLLSGSSCSSPAFHLGPNT-------SQLCSLAPADYSACARSGLTLNRYSTSLAET- :::: ::: :.:::.::: ::::.: .:: ::::... . .:... XP_005 SSHLLS-PSCSPPTFHLAPNTFNVGCRESQLCNLNLSDYPPCARSNMAALQSYPGLSDSG 400 410 420 430 440 450 440 450 460 470 480 pF1KB9 YNRLTN------QAGETFAPPRTPSYV-GVSSSTSV--NMSM---GGTDGDTFSCPQTSL :::: . : .::: : :::: . :. . :. : .: :: : .: : . XP_005 YNRLQSGTTSATQPSETFMPQRTPSLISGIPTPPSLPGNSKMEAYGGQLG-SFPTSQFQY 460 470 480 490 500 510 490 500 510 520 530 540 pF1KB9 SMQISGMSPQLQYIMPSPSSNAFATNQTHQGSYNTFRLHSPCALYGYNFSTSPKLAASPE :: .. . . : : . :. .. .:.:::.: ::.: :::::: :::.:::::: XP_005 VMQAGNAASS------SSSPHMFGGSHMQQSSYNAFSLHNPYNLYGYNFPTSPRLAASPE 520 530 540 550 560 550 560 570 580 590 600 pF1KB9 KIVSSQGSFLGSSPS-GTMTDRQMLPP-VE-GVHLLSSGGQQSFFDSRTLGSLTLSSSQV :. .::...: :::: :.. .::.:: .: ..:..: XP_005 KLSASQSTLLCSSPSNGAFGERQYLPSGMEHSMHMISPSPNNQQATNTCDGRQYGAVPGS 570 580 590 600 610 620 pF1KB9 SAHMV XP_005 SSQMSVHMV 630 607 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 17:10:01 2016 done: Mon Nov 7 17:10:02 2016 Total Scan time: 8.680 Total Display time: 0.060 Function used was FASTA [36.3.4 Apr, 2011]