FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4123, 511 aa 1>>>pF1KE4123 511 - 511 aa - 511 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.8116+/-0.00096; mu= 15.6153+/- 0.058 mean_var=84.3097+/-17.251, 0's: 0 Z-trim(106.4): 137 B-trim: 29 in 1/48 Lambda= 0.139680 statistics sampled from 8809 (8968) to 8809 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.643), E-opt: 0.2 (0.275), width: 16 Scan time: 2.610 The best scores are: opt bits E(32554) CCDS826.1 KCNA10 gene_id:3744|Hs108|chr1 ( 511) 3377 690.8 9.8e-199 CCDS8535.1 KCNA1 gene_id:3736|Hs108|chr12 ( 495) 1951 403.4 3e-112 CCDS827.1 KCNA2 gene_id:3737|Hs108|chr1 ( 499) 1940 401.2 1.4e-111 CCDS828.2 KCNA3 gene_id:3738|Hs108|chr1 ( 575) 1927 398.6 9.8e-111 CCDS55625.1 KCNA2 gene_id:3737|Hs108|chr1 ( 356) 1189 249.7 3.9e-66 CCDS41629.1 KCNA4 gene_id:3739|Hs108|chr11 ( 653) 1120 236.0 9.8e-62 CCDS12755.1 KCNA7 gene_id:3743|Hs108|chr19 ( 456) 1081 228.0 1.7e-59 CCDS8536.1 KCNA5 gene_id:3741|Hs108|chr12 ( 613) 838 179.2 1.2e-44 CCDS8534.1 KCNA6 gene_id:3742|Hs108|chr12 ( 529) 824 176.3 7.5e-44 CCDS13418.1 KCNB1 gene_id:3745|Hs108|chr20 ( 858) 738 159.1 1.8e-38 CCDS6209.1 KCNB2 gene_id:9312|Hs108|chr8 ( 911) 737 158.9 2.2e-38 CCDS13342.1 KCNS1 gene_id:3787|Hs108|chr20 ( 526) 687 148.7 1.5e-35 CCDS14314.1 KCND1 gene_id:3750|Hs108|chrX ( 647) 676 146.5 8.4e-35 CCDS9006.1 KCNC2 gene_id:3747|Hs108|chr12 ( 558) 662 143.7 5.3e-34 CCDS58255.1 KCNC2 gene_id:3747|Hs108|chr12 ( 583) 662 143.7 5.4e-34 CCDS9005.1 KCNC2 gene_id:3747|Hs108|chr12 ( 613) 662 143.7 5.7e-34 CCDS58257.1 KCNC2 gene_id:3747|Hs108|chr12 ( 618) 662 143.7 5.7e-34 CCDS58256.1 KCNC2 gene_id:3747|Hs108|chr12 ( 629) 662 143.7 5.8e-34 CCDS9007.1 KCNC2 gene_id:3747|Hs108|chr12 ( 638) 662 143.7 5.9e-34 CCDS844.1 KCND3 gene_id:3752|Hs108|chr1 ( 636) 654 142.1 1.8e-33 CCDS843.1 KCND3 gene_id:3752|Hs108|chr1 ( 655) 654 142.1 1.8e-33 CCDS6279.1 KCNS2 gene_id:3788|Hs108|chr8 ( 477) 644 140.0 5.7e-33 CCDS7827.1 KCNC1 gene_id:3746|Hs108|chr11 ( 511) 639 139.0 1.2e-32 CCDS44193.1 KCNC4 gene_id:3749|Hs108|chr1 ( 626) 640 139.3 1.2e-32 CCDS821.1 KCNC4 gene_id:3749|Hs108|chr1 ( 635) 640 139.3 1.3e-32 CCDS44547.1 KCNC1 gene_id:3746|Hs108|chr11 ( 585) 639 139.0 1.4e-32 CCDS5776.1 KCND2 gene_id:3751|Hs108|chr7 ( 630) 638 138.9 1.7e-32 CCDS6314.1 KCNV1 gene_id:27012|Hs108|chr8 ( 500) 627 136.6 6.4e-32 CCDS1692.1 KCNS3 gene_id:3790|Hs108|chr2 ( 491) 626 136.4 7.2e-32 CCDS1809.1 KCNG3 gene_id:170850|Hs108|chr2 ( 436) 623 135.7 1e-31 CCDS12793.1 KCNC3 gene_id:3748|Hs108|chr19 ( 757) 620 135.3 2.4e-31 CCDS13436.1 KCNG1 gene_id:3755|Hs108|chr20 ( 513) 594 129.9 6.5e-30 CCDS6447.1 KCNV2 gene_id:169522|Hs108|chr9 ( 545) 585 128.1 2.4e-29 CCDS1676.1 KCNF1 gene_id:3754|Hs108|chr2 ( 494) 584 127.9 2.6e-29 CCDS10945.1 KCNG4 gene_id:93107|Hs108|chr16 ( 519) 551 121.3 2.7e-27 CCDS12019.1 KCNG2 gene_id:26251|Hs108|chr18 ( 466) 539 118.8 1.3e-26 CCDS42674.1 KCNG3 gene_id:170850|Hs108|chr2 ( 425) 526 116.2 7.5e-26 CCDS13521.1 KCNQ2 gene_id:3785|Hs108|chr20 ( 393) 306 71.8 1.6e-12 CCDS46629.1 KCNQ2 gene_id:3785|Hs108|chr20 ( 841) 306 72.0 2.9e-12 CCDS13518.1 KCNQ2 gene_id:3785|Hs108|chr20 ( 844) 306 72.0 2.9e-12 CCDS13519.1 KCNQ2 gene_id:3785|Hs108|chr20 ( 854) 306 72.0 2.9e-12 CCDS13520.1 KCNQ2 gene_id:3785|Hs108|chr20 ( 872) 306 72.0 3e-12 CCDS7736.1 KCNQ1 gene_id:3784|Hs108|chr11 ( 676) 304 71.6 3.2e-12 CCDS456.1 KCNQ4 gene_id:9132|Hs108|chr1 ( 695) 295 69.8 1.2e-11 CCDS55035.1 KCNQ5 gene_id:56479|Hs108|chr6 ( 822) 285 67.8 5.3e-11 CCDS55037.1 KCNQ5 gene_id:56479|Hs108|chr6 ( 923) 285 67.8 5.9e-11 CCDS4976.1 KCNQ5 gene_id:56479|Hs108|chr6 ( 932) 285 67.8 5.9e-11 CCDS55034.1 KCNQ5 gene_id:56479|Hs108|chr6 ( 951) 285 67.8 6e-11 >>CCDS826.1 KCNA10 gene_id:3744|Hs108|chr1 (511 aa) initn: 3377 init1: 3377 opt: 3377 Z-score: 3681.4 bits: 690.8 E(32554): 9.8e-199 Smith-Waterman score: 3377; 100.0% identity (100.0% similar) in 511 aa overlap (1-511:1-511) 10 20 30 40 50 60 pF1KE4 MDVCGWKEMEVALVNFDNSDEIQEEPGYATDFDSTSPKGRPGGSSFSNGKILISESTNHE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 MDVCGWKEMEVALVNFDNSDEIQEEPGYATDFDSTSPKGRPGGSSFSNGKILISESTNHE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 TAFSKLPGDYADPPGPEPVVLNEGNQRVIINIAGLRFETQLRTLSQFPETLLGDREKRMQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 TAFSKLPGDYADPPGPEPVVLNEGNQRVIINIAGLRFETQLRTLSQFPETLLGDREKRMQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 FFDSMRNEYFFDRNRPSFDGILYYYQSGGKIRRPANVPIDIFADEISFYELGSEAMDQFR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 FFDSMRNEYFFDRNRPSFDGILYYYQSGGKIRRPANVPIDIFADEISFYELGSEAMDQFR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 EDEGFIKDPETLLPTNDIHRQFWLLFEYPESSSAARAVAVVSVLVVVISITIFCLETLPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 EDEGFIKDPETLLPTNDIHRQFWLLFEYPESSSAARAVAVVSVLVVVISITIFCLETLPE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 FREDRELKVVRDPNLNMSKTVLSQTMFTDPFFMVESTCIVWFTFELVLRFVVCPSKTDFF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 FREDRELKVVRDPNLNMSKTVLSQTMFTDPFFMVESTCIVWFTFELVLRFVVCPSKTDFF 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 RNIMNIIDIISIIPYFATLITELVQETEPSAQQNMSLAILRIIRLVRVFRIFKLSRHSKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 RNIMNIIDIISIIPYFATLITELVQETEPSAQQNMSLAILRIIRLVRVFRIFKLSRHSKG 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 LQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEVDEPESHFSSIPDGFWWAVVTMT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 LQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEVDEPESHFSSIPDGFWWAVVTMT 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE4 TVGYGDMCPTTPGGKIVGTLCAIAGVLTIALPVPVIVSNFNYFYHRETENEEKQNIPGEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 TVGYGDMCPTTPGGKIVGTLCAIAGVLTIALPVPVIVSNFNYFYHRETENEEKQNIPGEI 430 440 450 460 470 480 490 500 510 pF1KE4 ERILNSVGSRMGSTDSLNKTNGGCSTEKSRK ::::::::::::::::::::::::::::::: CCDS82 ERILNSVGSRMGSTDSLNKTNGGCSTEKSRK 490 500 510 >>CCDS8535.1 KCNA1 gene_id:3736|Hs108|chr12 (495 aa) initn: 1945 init1: 1592 opt: 1951 Z-score: 2128.6 bits: 403.4 E(32554): 3e-112 Smith-Waterman score: 1951; 69.5% identity (88.7% similar) in 416 aa overlap (64-476:13-427) 40 50 60 70 80 90 pF1KE4 STSPKGRPGGSSFSNGKILISESTNHETAFSKLPGDYADPPGPEPVVLN--EGNQRVIIN : :: : :. . . : .::.:: CCDS85 MTVMSGENVDEASAAPGHPQDGSYPRQADHDDHECCERVVIN 10 20 30 40 100 110 120 130 140 150 pF1KE4 IAGLRFETQLRTLSQFPETLLGDREKRMQFFDSMRNEYFFDRNRPSFDGILYYYQSGGKI :.::::::::.::.:::.::::. .:::..:: .::::::::::::::.:::::::::.. CCDS85 ISGLRFETQLKTLAQFPNTLLGNPKKRMRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRL 50 60 70 80 90 100 160 170 180 190 200 210 pF1KE4 RRPANVPIDIFADEISFYELGSEAMDQFREDEGFIKDPETLLPTNDIHRQFWLLFEYPES :::.:::.:.:..::.::::: :::..:::::::::. : :: .. .:: ::::::::: CCDS85 RRPVNVPLDMFSEEIKFYELGEEAMEKFREDEGFIKEEERPLPEKEYQRQVWLLFEYPES 110 120 130 140 150 160 220 230 240 250 260 270 pF1KE4 SSAARAVAVVSVLVVVISITIFCLETLPEFREDRELKVVRDPNLNMSKTVLSQTMFTDPF :. ::..:.:::.:..:::.:::::::::...:... . .. . .. ....::::: CCDS85 SGPARVIAIVSVMVILISIVIFCLETLPELKDDKDFTGTVH-RIDNTTVIYNSNIFTDPF 170 180 190 200 210 220 280 290 300 310 320 330 pF1KE4 FMVESTCIVWFTFELVLRFVVCPSKTDFFRNIMNIIDIISIIPYFATLITELV-QETEPS :.::. ::.::.::::.:: .::::::::.::::.:::..::::: :: ::.. :: . . CCDS85 FIVETLCIIWFSFELVVRFFACPSKTDFFKNIMNFIDIVAIIPYFITLGTEIAEQEGNQK 230 240 250 260 270 280 340 350 360 370 380 390 pF1KE4 AQQNMSLAILRIIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFS ..: ::::::.:::::::::::::::::::::::::::::::::::::::::::::::: CCDS85 GEQATSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFS 290 300 310 320 330 340 400 410 420 430 440 450 pF1KE4 SAVYFAEVDEPESHFSSIPDGFWWAVVTMTTVGYGDMCPTTPGGKIVGTLCAIAGVLTIA :::::::..: :::::::::.::::::.::::::::: :.: ::::::.::::::::::: CCDS85 SAVYFAEAEEAESHFSSIPDAFWWAVVSMTTVGYGDMYPVTIGGKIVGSLCAIAGVLTIA 350 360 370 380 390 400 460 470 480 490 500 510 pF1KE4 LPVPVIVSNFNYFYHRETENEEKQNIPGEIERILNSVGSRMGSTDSLNKTNGGCSTEKSR :::::::::::::::::::.::. .. CCDS85 LPVPVIVSNFNYFYHRETEGEEQAQLLHVSSPNLASDSDLSRRSSSTMSKSEYMEIEEDM 410 420 430 440 450 460 >>CCDS827.1 KCNA2 gene_id:3737|Hs108|chr1 (499 aa) initn: 1943 init1: 835 opt: 1940 Z-score: 2116.5 bits: 401.2 E(32554): 1.4e-111 Smith-Waterman score: 1940; 66.7% identity (83.1% similar) in 450 aa overlap (66-509:15-456) 40 50 60 70 80 90 pF1KE4 SPKGRPGGSSFSNGKILISESTNHETAFSKLPGDYADPPGPEPVVLNEGNQRVIINIAGL ::: : :: . .: .::.:::.:: CCDS82 MTVATGDPADEAAALPGHPQDTYDPE--ADHECCERVVINISGL 10 20 30 40 100 110 120 130 140 150 pF1KE4 RFETQLRTLSQFPETLLGDREKRMQFFDSMRNEYFFDRNRPSFDGILYYYQSGGKIRRPA ::::::.::.::::::::: .:::..:: .::::::::::::::.:::::::::..:::. CCDS82 RFETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPV 50 60 70 80 90 100 160 170 180 190 200 210 pF1KE4 NVPIDIFADEISFYELGSEAMDQFREDEGFIKDPETLLPTNDIHRQFWLLFEYPESSSAA :::.:::..:: ::::: :::..::::::.::. : :: :...:: ::::::::::. : CCDS82 NVPLDIFSEEIRFYELGEEAMEMFREDEGYIKEEERPLPENEFQRQVWLLFEYPESSGPA 110 120 130 140 150 160 220 230 240 250 260 270 pF1KE4 RAVAVVSVLVVVISITIFCLETLPEFREDRE----LKVVRDPNLNMSKTVLSQTMFTDPF : .:.:::.:..:::. ::::::: ::.. : :. : . ..: ::::: CCDS82 RIIAIVSVMVILISIVSFCLETLPIFRDENEDMHGSGVTFHTYSNSTIGYQQSTSFTDPF 170 180 190 200 210 220 280 290 300 310 320 330 pF1KE4 FMVESTCIVWFTFELVLRFVVCPSKTDFFRNIMNIIDIISIIPYFATLITELVQETEPS- :.::. ::.::.::...:: .::::. :: ::::::::..::::: :: :::... : . CCDS82 FIVETLCIIWFSFEFLVRFFACPSKAGFFTNIMNIIDIVAIIPYFITLGTELAEKPEDAQ 230 240 250 260 270 280 340 350 360 370 380 pF1KE4 -AQQNMSLAILRIIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILF .:: :::::::.::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 QGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILF 290 300 310 320 330 340 390 400 410 420 430 440 pF1KE4 SSAVYFAEVDEPESHFSSIPDGFWWAVVTMTTVGYGDMCPTTPGGKIVGTLCAIAGVLTI ::::::::.:: ::.: ::::.::::::.::::::::: ::: ::::::.:::::::::: CCDS82 SSAVYFAEADERESQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAGVLTI 350 360 370 380 390 400 450 460 470 480 490 500 pF1KE4 ALPVPVIVSNFNYFYHRETENEEKQNIPGEIERILNSVGSRMGSTDSLNKTNGGCSTEKS ::::::::::::::::::::.::. . . . .. :. .:.:. .. . :: CCDS82 ALPVPVIVSNFNYFYHRETEGEEQA------QYLQVTSCPKIPSSPDLKKSRSASTISKS 410 420 430 440 450 510 pF1KE4 RK CCDS82 DYMEIQEGVNNSNEDFREENLKTANCTLANTNYVNITKMLTDV 460 470 480 490 >>CCDS828.2 KCNA3 gene_id:3738|Hs108|chr1 (575 aa) initn: 1924 init1: 836 opt: 1927 Z-score: 2101.5 bits: 398.6 E(32554): 9.8e-111 Smith-Waterman score: 1927; 70.8% identity (87.3% similar) in 408 aa overlap (73-473:90-496) 50 60 70 80 90 100 pF1KE4 GSSFSNGKILISESTNHETAFSKLPGDYADPPG-PEPVVLNEGNQRVIINIAGLRFETQL ::. : . ..::.:::.:::::::: CCDS82 HLLEPEVADGGGAPPQGGCGGGGCDRYEPLPPSLPAAGEQDCCGERVVINISGLRFETQL 60 70 80 90 100 110 110 120 130 140 150 160 pF1KE4 RTLSQFPETLLGDREKRMQFFDSMRNEYFFDRNRPSFDGILYYYQSGGKIRRPANVPIDI .:: ::::::::: ..::..:: .::::::::::::::.:::::::::.::::.:::::: CCDS82 KTLCQFPETLLGDPKRRMRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRIRRPVNVPIDI 120 130 140 150 160 170 170 180 190 200 210 220 pF1KE4 FADEISFYELGSEAMDQFREDEGFIKDPETLLPTNDIHRQFWLLFEYPESSSAARAVAVV :..:: ::.:: :::..:::::::... : :: :..:: ::::::::::. ::..:.: CCDS82 FSEEIRFYQLGEEAMEKFREDEGFLREEERPLPRRDFQRQVWLLFEYPESSGPARGIAIV 180 190 200 210 220 230 230 240 250 260 270 pF1KE4 SVLVVVISITIFCLETLPEFREDRELKVVRDPNL------NMSKTVLSQTMFTDPFFMVE ::::..:::.:::::::::::.... . . . . : . . . :.::::.:: CCDS82 SVLVILISIVIFCLETLPEFRDEKDYPASTSQDSFEAAGNSTSGSRAGASSFSDPFFVVE 240 250 260 270 280 290 280 290 300 310 320 330 pF1KE4 STCIVWFTFELVLRFVVCPSKTDFFRNIMNIIDIISIIPYFATLITELVQETEPSAQQNM . ::.::.:::..:: .::::. : :::::.:::..::::: :: :::. : . ..:: : CCDS82 TLCIIWFSFELLVRFFACPSKATFSRNIMNLIDIVAIIPYFITLGTELA-ERQGNGQQAM 300 310 320 330 340 350 340 350 360 370 380 390 pF1KE4 SLAILRIIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYF ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 SLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYF 360 370 380 390 400 410 400 410 420 430 440 450 pF1KE4 AEVDEPESHFSSIPDGFWWAVVTMTTVGYGDMCPTTPGGKIVGTLCAIAGVLTIALPVPV ::.:.: : ::::::.:::::::::::::::: :.: ::::::.:::::::::::::::: CCDS82 AEADDPTSGFSSIPDAFWWAVVTMTTVGYGDMHPVTIGGKIVGSLCAIAGVLTIALPVPV 420 430 440 450 460 470 460 470 480 490 500 510 pF1KE4 IVSNFNYFYHRETENEEKQNIPGEIERILNSVGSRMGSTDSLNKTNGGCSTEKSRK ::::::::::::::.::. CCDS82 IVSNFNYFYHRETEGEEQSQYMHVGSCQHLSSSAEELRKARSNSTLSKSEYMVIEEGGMN 480 490 500 510 520 530 >>CCDS55625.1 KCNA2 gene_id:3737|Hs108|chr1 (356 aa) initn: 1205 init1: 816 opt: 1189 Z-score: 1300.8 bits: 249.7 E(32554): 3.9e-66 Smith-Waterman score: 1189; 59.4% identity (79.9% similar) in 308 aa overlap (66-367:15-318) 40 50 60 70 80 90 pF1KE4 SPKGRPGGSSFSNGKILISESTNHETAFSKLPGDYADPPGPEPVVLNEGNQRVIINIAGL ::: : :: . .: .::.:::.:: CCDS55 MTVATGDPADEAAALPGHPQDTYDPE--ADHECCERVVINISGL 10 20 30 40 100 110 120 130 140 150 pF1KE4 RFETQLRTLSQFPETLLGDREKRMQFFDSMRNEYFFDRNRPSFDGILYYYQSGGKIRRPA ::::::.::.::::::::: .:::..:: .::::::::::::::.:::::::::..:::. CCDS55 RFETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPV 50 60 70 80 90 100 160 170 180 190 200 210 pF1KE4 NVPIDIFADEISFYELGSEAMDQFREDEGFIKDPETLLPTNDIHRQFWLLFEYPESSSAA :::.:::..:: ::::: :::..::::::.::. : :: :...:: ::::::::::. : CCDS55 NVPLDIFSEEIRFYELGEEAMEMFREDEGYIKEEERPLPENEFQRQVWLLFEYPESSGPA 110 120 130 140 150 160 220 230 240 250 260 270 pF1KE4 RAVAVVSVLVVVISITIFCLETLPEFREDRE----LKVVRDPNLNMSKTVLSQTMFTDPF : .:.:::.:..:::. ::::::: ::.. : :. : . ..: ::::: CCDS55 RIIAIVSVMVILISIVSFCLETLPIFRDENEDMHGSGVTFHTYSNSTIGYQQSTSFTDPF 170 180 190 200 210 220 280 290 300 310 320 330 pF1KE4 FMVESTCIVWFTFELVLRFVVCPSKTDFFRNIMNIIDIISIIPYFATLITELVQETEPS- :.::. ::.::.::...:: .::::. :: ::::::::..::::: :: :::... : . CCDS55 FIVETLCIIWFSFEFLVRFFACPSKAGFFTNIMNIIDIVAIIPYFITLGTELAEKPEDAQ 230 240 250 260 270 280 340 350 360 370 380 pF1KE4 -AQQNMSLAILRIIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILF .:: :::::::.::: : : .. .. ..: : :. . CCDS55 QGQQAMSLAILRVIRLER--RPLQSQKSKRGRQHLNTSHDCTLGINLVAGMTVQWTRASG 290 300 310 320 330 340 390 400 410 420 430 440 pF1KE4 SSAVYFAEVDEPESHFSSIPDGFWWAVVTMTTVGYGDMCPTTPGGKIVGTLCAIAGVLTI CCDS55 PDDRQTPAVTTLHRMY 350 >>CCDS41629.1 KCNA4 gene_id:3739|Hs108|chr11 (653 aa) initn: 1983 init1: 839 opt: 1120 Z-score: 1221.8 bits: 236.0 E(32554): 9.8e-62 Smith-Waterman score: 1917; 66.0% identity (84.8% similar) in 447 aa overlap (49-476:138-579) 20 30 40 50 60 70 pF1KE4 SDEIQEEPGYATDFDSTSPKGRPGGSSFSNGKILISESTN-HETAFSKL-PGDYADPPGP :.. ::. . : ... : : : . : CCDS41 LMPSGSEEKILRELSEEEEDEEEEEEEEEEGRFYYSEDDHGDECSYTDLLPQDEGGG-GY 110 120 130 140 150 160 80 90 100 110 120 130 pF1KE4 EPVVLNEGNQRVIINIAGLRFETQLRTLSQFPETLLGDREKRMQFFDSMRNEYFFDRNRP : .. .::.::..:::::::..::.::::::::: ::: :.:: .::::::::::: CCDS41 SSVRYSDCCERVVINVSGLRFETQMKTLAQFPETLLGDPEKRTQYFDPLRNEYFFDRNRP 170 180 190 200 210 220 140 150 160 170 180 190 pF1KE4 SFDGILYYYQSGGKIRRPANVPIDIFADEISFYELGSEAMDQFREDEGFIKDPET-LLPT :::.:::::::::...::.:::.:::..:..::.:: ::. .:::::::... : :: CCDS41 SFDAILYYYQSGGRLKRPVNVPFDIFTEEVKFYQLGEEALLKFREDEGFVREEEDRALPE 230 240 250 260 270 280 200 210 220 230 240 pF1KE4 NDIHRQFWLLFEYPESSSAARAVAVVSVLVVVISITIFCLETLPEFREDREL-------- :....:.::::::::::: ::..:.:::::..:::.:::::::::::.::.: CCDS41 NEFKKQIWLLFEYPESSSPARGIAIVSVLVILISIVIFCLETLPEFRDDRDLVMALSAGG 290 300 310 320 330 340 250 260 270 280 290 300 pF1KE4 --KVVRD---PNLNMSKTVLSQTMFTDPFFMVESTCIVWFTFELVLRFVVCPSKTDFFRN .. : :.:. : ..:.:.::::.::..:::::.::.:.: .:::.. ::.: CCDS41 HGGLLNDTSAPHLENS----GHTIFNDPFFIVETVCIVWFSFEFVVRCFACPSQALFFKN 350 360 370 380 390 400 310 320 330 340 350 pF1KE4 IMNIIDIISIIPYFATLITELVQET---EPSAQQNMSLAILRIIRLVRVFRIFKLSRHSK :::::::.::.::: :: :.:.:. . . :: ::.:::::::::::::::::::::: CCDS41 IMNIIDIVSILPYFITLGTDLAQQQGGGNGQQQQAMSFAILRIIRLVRVFRIFKLSRHSK 410 420 430 440 450 460 360 370 380 390 400 410 pF1KE4 GLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEVDEPESHFSSIPDGFWWAVVTM ::::::.::.::::::::::::::::::::::::::::.::: .::.::::.:::::::: CCDS41 GLQILGHTLRASMRELGLLIFFLFIGVILFSSAVYFAEADEPTTHFQSIPDAFWWAVVTM 470 480 490 500 510 520 420 430 440 450 460 470 pF1KE4 TTVGYGDMCPTTPGGKIVGTLCAIAGVLTIALPVPVIVSNFNYFYHRETENEEKQNIPGE :::::::: : : ::::::.:::::::::::::::::::::::::::::::::. .. CCDS41 TTVGYGDMKPITVGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETENEEQTQLTQN 530 540 550 560 570 580 480 490 500 510 pF1KE4 IERILNSVGSRMGSTDSLNKTNGGCSTEKSRK CCDS41 AVSCPYLPSNLLKKFRSSTSSSLGDKSEYLEMEEGVKESLCAKEEKCQGKGDDSETDKNN 590 600 610 620 630 640 >>CCDS12755.1 KCNA7 gene_id:3743|Hs108|chr19 (456 aa) initn: 1785 init1: 818 opt: 1081 Z-score: 1181.6 bits: 228.0 E(32554): 1.7e-59 Smith-Waterman score: 1766; 64.6% identity (85.0% similar) in 412 aa overlap (72-472:2-409) 50 60 70 80 90 100 pF1KE4 GGSSFSNGKILISESTNHETAFSKLPGDYADPPGPEPVVLNEGNQRVIINIAGLRFETQL .: : : : :...:.:::::::. CCDS12 MEPRCPPPCGCCE---RLVLNVAGLRFETRA 10 20 110 120 130 140 150 160 pF1KE4 RTLSQFPETLLGDREKRMQFFDSMRNEYFFDRNRPSFDGILYYYQSGGKIRRPANVPIDI :::..::.::::: .: .:.:. : ::::::.:::::..::::::::..::::.::.:. CCDS12 RTLGRFPDTLLGDPARRGRFYDDARREYFFDRHRPSFDAVLYYYQSGGRLRRPAHVPLDV 30 40 50 60 70 80 170 180 190 200 210 220 pF1KE4 FADEISFYELGSEAMDQFREDEGFIKDPETLLPTNDIHRQFWLLFEYPESSSAARAVAVV : .:..:: ::. :. ..::::: :: :: . ::.:::::.::::.:::..::: CCDS12 FLEEVAFYGLGAAALARLREDEGCPVPPERPLPRRAFARQLWLLFEFPESSQAARVLAVV 90 100 110 120 130 140 230 240 250 260 270 pF1KE4 SVLVVVISITIFCLETLPEFREDRE-----LKVVRDP---NLNMSKTVLS---QTMFTDP ::::...::..:::::::.::.::. .. : :: :. . . . :.:: CCDS12 SVLVILVSIVVFCLETLPDFRDDRDGTGLAAAAAAGPFPAPLNGSSQMPGNPPRLPFNDP 150 160 170 180 190 200 280 290 300 310 320 330 pF1KE4 FFMVESTCIVWFTFELVLRFVVCPSKTDFFRNIMNIIDIISIIPYFATLITELVQETEPS ::.::. :: ::.:::..:..:::::. ::.:.::.::...:.:::..: :::... . CCDS12 FFVVETLCICWFSFELLVRLLVCPSKAIFFKNVMNLIDFVAILPYFVALGTELARQ-RGV 210 220 230 240 250 260 340 350 360 370 380 390 pF1KE4 AQQNMSLAILRIIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFS .:: :::::::.::::::::::::::::::::::::::.:::::::::::::::::.::: CCDS12 GQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLRASMRELGLLIFFLFIGVVLFS 270 280 290 300 310 320 400 410 420 430 440 450 pF1KE4 SAVYFAEVDEPESHFSSIPDGFWWAVVTMTTVGYGDMCPTTPGGKIVGTLCAIAGVLTIA :::::::::. .:::.:::..:::::::::::::::: :.: ::::::.::::::::::. CCDS12 SAVYFAEVDRVDSHFTSIPESFWWAVVTMTTVGYGDMAPVTVGGKIVGSLCAIAGVLTIS 330 340 350 360 370 380 460 470 480 490 500 510 pF1KE4 LPVPVIVSNFNYFYHRETENEEKQNIPGEIERILNSVGSRMGSTDSLNKTNGGCSTEKSR ::::::::::.::::::::.:: CCDS12 LPVPVIVSNFSYFYHRETEGEEAGMFSHVDMQPCGPLEGKANGGLVDGEVPELPPPLWAP 390 400 410 420 430 440 >>CCDS8536.1 KCNA5 gene_id:3741|Hs108|chr12 (613 aa) initn: 1662 init1: 835 opt: 838 Z-score: 915.1 bits: 179.2 E(32554): 1.2e-44 Smith-Waterman score: 1872; 69.4% identity (84.3% similar) in 415 aa overlap (85-472:119-531) 60 70 80 90 100 110 pF1KE4 ESTNHETAFSKLPGDYADPPGPEPVVLNEGNQRVIINIAGLRFETQLRTLSQFPETLLGD .::: :::.:::::::: ::.:::.::::: CCDS85 RRPPPEDEEEEGDPGLGTVEDQALGTASLHHQRVHINISGLRFETQLGTLAQFPNTLLGD 90 100 110 120 130 140 120 130 140 150 160 170 pF1KE4 REKRMQFFDSMRNEYFFDRNRPSFDGILYYYQSGGKIRRPANVPIDIFADEISFYELGSE ::...:: .::::::::::::::::::::::::..:::.:: .:.::::: ::.::.: CCDS85 PAKRLRYFDPLRNEYFFDRNRPSFDGILYYYQSGGRLRRPVNVSLDVFADEIRFYQLGDE 150 160 170 180 190 200 180 190 200 210 220 230 pF1KE4 AMDQFREDEGFIKDPETLLPTNDIHRQFWLLFEYPESSSAARAVAVVSVLVVVISITIFC ::..:::::::::. : :: :...:: ::.:::::::..:::.:.:::::..::: :: CCDS85 AMERFREDEGFIKEEEKPLPRNEFQRQVWLIFEYPESSGSARAIAIVSVLVILISIITFC 210 220 230 240 250 260 240 250 260 270 pF1KE4 LETLPEFREDREL--------------------KVVRDPNLNMSKTVLSQTMFTDPFFMV ::::::::..::: :. :. .: .:. .::::.: CCDS85 LETLPEFRDERELLRHPPAPHQPPAPAPGANGSGVMAPPSGPTVAPLLPRTL-ADPFFIV 270 280 290 300 310 320 280 290 300 310 320 pF1KE4 ESTCIVWFTFELVLRFVVCPSKTDFFRNIMNIIDIISIIPYFATLITELVQETEP----- :.::..::::::..:: .::::. : ::::::::...:.::: :: :::. : .: CCDS85 ETTCVIWFTFELLVRFFACPSKAGFSRNIMNIIDVVAIFPYFITLGTELA-EQQPGGGGG 330 340 350 360 370 380 330 340 350 360 370 380 pF1KE4 --SAQQNMSLAILRIIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVI ..:: :::::::.:::::::::::::::::::::::.::.:::::::::::::::::: CCDS85 GQNGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGKTLQASMRELGLLIFFLFIGVI 390 400 410 420 430 440 390 400 410 420 430 440 pF1KE4 LFSSAVYFAEVDEPESHFSSIPDGFWWAVVTMTTVGYGDMCPTTPGGKIVGTLCAIAGVL ::::::::::.:. .:::::::.:::::::::::::::: : : ::::::.:::::::: CCDS85 LFSSAVYFAEADNQGTHFSSIPDAFWWAVVTMTTVGYGDMRPITVGGKIVGSLCAIAGVL 450 460 470 480 490 500 450 460 470 480 490 500 pF1KE4 TIALPVPVIVSNFNYFYHRETENEEKQNIPGEIERILNSVGSRMGSTDSLNKTNGGCSTE :::::::::::::::::::::..:: CCDS85 TIALPVPVIVSNFNYFYHRETDHEEPAVLKEEQGTQSQGPGLDRGVQRKVSGSRGSFCKA 510 520 530 540 550 560 >>CCDS8534.1 KCNA6 gene_id:3742|Hs108|chr12 (529 aa) initn: 1906 init1: 811 opt: 824 Z-score: 900.8 bits: 176.3 E(32554): 7.5e-44 Smith-Waterman score: 1796; 64.4% identity (78.5% similar) in 452 aa overlap (68-473:26-474) 40 50 60 70 80 90 pF1KE4 KGRPGGSSFSNGKILISESTNHETAFSKLPGDYADPPGPEPVVLNEGNQRVIINIAGLRF ::. . : .: :..:::.:::: CCDS85 MRSEKSLTLAAPGEVRGPEGEQQDAGDFPEAGGGGGCCSSE---RLVINISGLRF 10 20 30 40 50 100 110 120 130 140 150 pF1KE4 ETQLRTLSQFPETLLGDREKRMQFFDSMRNEYFFDRNRPSFDGILYYYQSGGKIRRPANV :::::::: ::.::::: .:..::: .::::::::::::::.:::::::::..:::.:: CCDS85 ETQLRTLSLFPDTLLGDPGRRVRFFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNV 60 70 80 90 100 110 160 170 180 190 200 210 pF1KE4 PIDIFADEISFYELGSEAMDQFREDEGFIKD---PETLLPTNDIHRQFWLLFEYPESSSA :.::: .:: ::.::.::. :::::: . . : ::.. ..:: ::::::::::. CCDS85 PLDIFLEEIRFYQLGDEALAAFREDEGCLPEGGEDEKPLPSQPFQRQVWLLFEYPESSGP 120 130 140 150 160 170 220 230 240 250 pF1KE4 ARAVAVVSVLVVVISITIFCLETLPEFRED----------RELKVVR---------DPNL ::..:.:::::..:::.::::::::.:: : : : : : . CCDS85 ARGIAIVSVLVILISIVIFCLETLPQFRVDGRGGNNGGVSRVSPVSRGSQEEEEDEDDSY 180 190 200 210 220 230 260 270 280 290 300 pF1KE4 NM---------------SKTVLSQTMFTDPFFMVESTCIVWFTFELVLRFVVCPSKTDFF .. : ..:. ..::::::.::. :::::::::..:: .:::: :: CCDS85 TFHHGITPGEMGTGGSSSLSTLGGSFFTDPFFLVETLCIVWFTFELLVRFSACPSKPAFF 240 250 260 270 280 290 310 320 330 340 350 pF1KE4 RNIMNIIDIISIIPYFATLITELVQETE--PSA-------QQNMSLAILRIIRLVRVFRI ::::::::...:.::: :: :::::. : :.. :: :::::::.::::::::: CCDS85 RNIMNIIDLVAIFPYFITLGTELVQQQEQQPASGGGGQNGQQAMSLAILRVIRLVRVFRI 300 310 320 330 340 350 360 370 380 390 400 410 pF1KE4 FKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEVDEPESHFSSIPDG ::::::::::::::.::.::::::::::::::::::::::::::::.:. .: : ::::. CCDS85 FKLSRHSKGLQILGKTLQASMRELGLLIFFLFIGVILFSSAVYFAEADDDDSLFPSIPDA 360 370 380 390 400 410 420 430 440 450 460 470 pF1KE4 FWWAVVTMTTVGYGDMCPTTPGGKIVGTLCAIAGVLTIALPVPVIVSNFNYFYHRETENE :::::::::::::::: : : ::::::.::::::::::::::::::::::::::::::.: CCDS85 FWWAVVTMTTVGYGDMYPMTVGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETEQE 420 430 440 450 460 470 480 490 500 510 pF1KE4 EKQNIPGEIERILNSVGSRMGSTDSLNKTNGGCSTEKSRK :. CCDS85 EQGQYTHVTCGQPAPDLRATDNGLGKPDFPEANRERRPSYLPTPHRAYAEKRMLTEV 480 490 500 510 520 >>CCDS13418.1 KCNB1 gene_id:3745|Hs108|chr20 (858 aa) initn: 956 init1: 545 opt: 738 Z-score: 804.0 bits: 159.1 E(32554): 1.8e-38 Smith-Waterman score: 912; 37.6% identity (66.6% similar) in 458 aa overlap (73-498:17-449) 50 60 70 80 90 100 pF1KE4 GSSFSNGKILISESTNHETAFSKLPGDYADPPGPEPVVLNEG-NQRVIINIAGLRFETQL :: : .: ... ..:: .:..:: :. CCDS13 MPAGMTKHGSRSTSSLPPEPMEIVRSKACSRRVRLNVGGLAHEVLW 10 20 30 40 110 120 130 140 150 pF1KE4 RTLSQFPETLLGD------REKRMQFFDSMR---NEYFFDRNRPSFDGILYYYQSGGKIR :::...:.: :: ... .. :.. :::::::. .: .:: .:..: ... CCDS13 RTLDRLPRTRLGKLRDCNTHDSLLEVCDDYSLDDNEYFFDRHPGAFTSILNFYRTG-RLH 50 60 70 80 90 100 160 170 180 190 pF1KE4 RPANVPIDIFADEISFY---ELGSEAMDQFRE-------DEGFIKDPETLLPTN------ .. :..:.... :. :. : : .: . .. ::: . CCDS13 MMEEMCALSFSQELDYWGIDEIYLESCCQARYHQKKEQMNEELKREAETLREREGEEFDN 110 120 130 140 150 160 200 210 220 230 240 250 pF1KE4 ----DIHRQFWLLFEYPESSSAARAVAVVSVLVVVISITIFCLETLPEFREDRELKVVRD . ....: :.: :.:: ::. .:..:.. .:.: . :.::::.. :. : CCDS13 TCCAEKRKKLWDLLEKPNSSVAAKILAIISIMFIVLSTIALSLNTLPELQSLDEFGQSTD 170 180 190 200 210 220 260 270 280 290 300 310 pF1KE4 -PNLNMSKTVLSQTMFTDPFFMVESTCIVWFTFELVLRFVVCPSKTDFFRNIMNIIDIIS :.: ::..::.:::.: .:::. :.: ::.. .: ::... CCDS13 NPQLAH----------------VEAVCIAWFTMEYLLRFLSSPKKWKFFKGPLNAIDLLA 230 240 250 260 320 330 340 350 360 370 pF1KE4 IIPYFATLITELVQETEPSAQQNMSLA-ILRIIRLVRVFRIFKLSRHSKGLQILGQTLKA :.::..:. .. :.. :. : ... ...:.:..:..::.::.::: ::: :: ::. CCDS13 ILPYYVTI---FLTESNKSVLQFQNVRRVVQIFRIMRILRILKLARHSTGLQSLGFTLRR 270 280 290 300 310 320 380 390 400 410 420 430 pF1KE4 SMRELGLLIFFLFIGVILFSSAVYFAEVDEPESHFSSIPDGFWWAVVTMTTVGYGDMCPT :. ::::::.:: .:...::: :.::: :: ...:.::: .::::..:::::::::. : CCDS13 SYNELGLLILFLAMGIMIFSSLVFFAEKDEDDTKFKSIPASFWWATITMTTVGYGDIYPK 330 340 350 360 370 380 440 450 460 470 480 490 pF1KE4 TPGGKIVGTLCAIAGVLTIALPVPVIVSNFNYFYHRETENEEKQNIPGEIERILNSVGSR : ::::: :: :::::.::::.:.::.::. ::... ..:. . .:: ..: CCDS13 TLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKEQKRQEKAIKRREALER-----AKR 390 400 410 420 430 440 500 510 pF1KE4 MGSTDSLNKTNGGCSTEKSRK :: :.: CCDS13 NGSIVSMNMKDAFARSIEMMDIVVEKNGENMGKKDKVQDNHLSPNKWKWTKRTLSETSSS 450 460 470 480 490 500 511 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 17:02:13 2016 done: Mon Nov 7 17:02:14 2016 Total Scan time: 2.610 Total Display time: 0.090 Function used was FASTA [36.3.4 Apr, 2011]