FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4258, 981 aa 1>>>pF1KE4258 981 - 981 aa - 981 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.7118+/-0.000977; mu= 14.1115+/- 0.059 mean_var=85.4743+/-16.870, 0's: 0 Z-trim(106.0): 25 B-trim: 0 in 0/50 Lambda= 0.138726 statistics sampled from 8746 (8762) to 8746 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.642), E-opt: 0.2 (0.269), width: 16 Scan time: 4.220 The best scores are: opt bits E(32554) CCDS1332.1 TDRD5 gene_id:163589|Hs108|chr1 ( 981) 6521 1315.6 0 CCDS55663.1 TDRD5 gene_id:163589|Hs108|chr1 (1035) 4805 972.2 0 CCDS77385.1 TDRD15 gene_id:100129278|Hs108|chr2 (1934) 295 69.6 6.7e-11 CCDS41395.1 TDRKH gene_id:11022|Hs108|chr1 ( 516) 286 67.7 6.9e-11 CCDS41394.1 TDRKH gene_id:11022|Hs108|chr1 ( 561) 286 67.7 7.4e-11 CCDS7588.1 TDRD1 gene_id:56165|Hs108|chr10 (1189) 291 68.8 7.5e-11 >>CCDS1332.1 TDRD5 gene_id:163589|Hs108|chr1 (981 aa) initn: 6521 init1: 6521 opt: 6521 Z-score: 7048.3 bits: 1315.6 E(32554): 0 Smith-Waterman score: 6521; 100.0% identity (100.0% similar) in 981 aa overlap (1-981:1-981) 10 20 30 40 50 60 pF1KE4 MSEQERIQECLRKEIRSLLISTKDGLSPQELEKEYLLMVGNHLPLRILGYRSTMELVLDM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 MSEQERIQECLRKEIRSLLISTKDGLSPQELEKEYLLMVGNHLPLRILGYRSTMELVLDM 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 PDVVRVCPGAGGTVILKAIPDESTKGIASLVAKQRSSHKLRNSMHKGRPSIYSGPRSHRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 PDVVRVCPGAGGTVILKAIPDESTKGIASLVAKQRSSHKLRNSMHKGRPSIYSGPRSHRR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 VPYRGRVAPILPAVVKSELKDLLALSPVLLSDFEKAFAKRFGRSFQYMQYGFLSMFEVLN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 VPYRGRVAPILPAVVKSELKDLLALSPVLLSDFEKAFAKRFGRSFQYMQYGFLSMFEVLN 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 AASDVISVEQTRAGSLLMLKKSVTEEKPRGCPAGKIFTQPFRMKQGSYSTGFPVAKPCFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 AASDVISVEQTRAGSLLMLKKSVTEEKPRGCPAGKIFTQPFRMKQGSYSTGFPVAKPCFS 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 QPTSNMEPPKQIMSMEKTSKLNVVETSRLNHTEKLNQLENTFKSVIAQIGPGGTISSELK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 QPTSNMEPPKQIMSMEKTSKLNVVETSRLNHTEKLNQLENTFKSVIAQIGPGGTISSELK 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 HKIKFVVSKFPEGLFISKLLGEYEVIFKEQLSPKKLGFLNVTELVGALSDILHVEFRKGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 HKIKFVVSKFPEGLFISKLLGEYEVIFKEQLSPKKLGFLNVTELVGALSDILHVEFRKGH 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 QDLLVFDADKKPLPPVQSDKKIEAKACVSSPPRNSLSTAAVKETVWNCPSKKQKEPQQKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 QDLLVFDADKKPLPPVQSDKKIEAKACVSSPPRNSLSTAAVKETVWNCPSKKQKEPQQKI 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE4 CKKPNLVVKPLQLQVETNKSELNLAMANHDIPPDAVPNKKLCRLPPLDTSSLIGVFVEYI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 CKKPNLVVKPLQLQVETNKSELNLAMANHDIPPDAVPNKKLCRLPPLDTSSLIGVFVEYI 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE4 ISPSQFYIRIYSRDSSELLEDMMIEMRRCYSNQLVSDRYVMPECFIQPGHLCCVRISEDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 ISPSQFYIRIYSRDSSELLEDMMIEMRRCYSNQLVSDRYVMPECFIQPGHLCCVRISEDK 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE4 WWYRVIIHRVLEKQEVEVFYPDFGNIGIVQKSSLRFLKCCYTKLPAQAIPCSLAWVRPVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 WWYRVIIHRVLEKQEVEVFYPDFGNIGIVQKSSLRFLKCCYTKLPAQAIPCSLAWVRPVE 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE4 EHWTSKAILQFQKLCGLKPLVGVVDEYVDGILNIFLCDTSSNEDVYFHHVLRTEGHAIVC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 EHWTSKAILQFQKLCGLKPLVGVVDEYVDGILNIFLCDTSSNEDVYFHHVLRTEGHAIVC 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE4 RENISSKGFSELNPLALYTTSSGGPEDIVLTELGYPSQQHYFNEDRKISPQSKESELRIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 RENISSKGFSELNPLALYTTSSGGPEDIVLTELGYPSQQHYFNEDRKISPQSKESELRIL 670 680 690 700 710 720 730 740 750 760 770 780 pF1KE4 DEIPTGMPCLESVTIGDDIWDENWLPLQAKMGKGGDAASHLFTASLGGKNQYSSCKEMPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 DEIPTGMPCLESVTIGDDIWDENWLPLQAKMGKGGDAASHLFTASLGGKNQYSSCKEMPQ 730 740 750 760 770 780 790 800 810 820 830 840 pF1KE4 KDWCFSTPKDTWDDSWQPSGLVNGTKVEVHKPEVLGAQEKNTGTNRTQKQLDINGSSDSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 KDWCFSTPKDTWDDSWQPSGLVNGTKVEVHKPEVLGAQEKNTGTNRTQKQLDINGSSDSS 790 800 810 820 830 840 850 860 870 880 890 900 pF1KE4 TLPKLEEFCTSLTQSEQSADGSQSEPNNSQTQPKQIQLSTAAPCSTTAVDDSAEKPSGSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 TLPKLEEFCTSLTQSEQSADGSQSEPNNSQTQPKQIQLSTAAPCSTTAVDDSAEKPSGSV 850 860 870 880 890 900 910 920 930 940 950 960 pF1KE4 ESSPEILKNEDFSSSRAITLYKDKRQESVDQLSLILSYECQISQKLYIPRSTATAALGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 ESSPEILKNEDFSSSRAITLYKDKRQESVDQLSLILSYECQISQKLYIPRSTATAALGAA 910 920 930 940 950 960 970 980 pF1KE4 ARLATSRSLLHWYPSVKRMEA ::::::::::::::::::::: CCDS13 ARLATSRSLLHWYPSVKRMEA 970 980 >>CCDS55663.1 TDRD5 gene_id:163589|Hs108|chr1 (1035 aa) initn: 4790 init1: 4790 opt: 4805 Z-score: 5191.8 bits: 972.2 E(32554): 0 Smith-Waterman score: 6260; 94.7% identity (94.7% similar) in 1013 aa overlap (1-959:1-1013) 10 20 30 40 50 60 pF1KE4 MSEQERIQECLRKEIRSLLISTKDGLSPQELEKEYLLMVGNHLPLRILGYRSTMELVLDM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 MSEQERIQECLRKEIRSLLISTKDGLSPQELEKEYLLMVGNHLPLRILGYRSTMELVLDM 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 PDVVRVCPGAGGTVILKAIPDESTKGIASLVAKQRSSHKLRNSMHKGRPSIYSGPRSHRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 PDVVRVCPGAGGTVILKAIPDESTKGIASLVAKQRSSHKLRNSMHKGRPSIYSGPRSHRR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 VPYRGRVAPILPAVVKSELKDLLALSPVLLSDFEKAFAKRFGRSFQYMQYGFLSMFEVLN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 VPYRGRVAPILPAVVKSELKDLLALSPVLLSDFEKAFAKRFGRSFQYMQYGFLSMFEVLN 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 AASDVISVEQTRAGSLLMLKKSVTEEKPRGCPAGKIFTQPFRMKQGSYSTGFPVAKPCFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 AASDVISVEQTRAGSLLMLKKSVTEEKPRGCPAGKIFTQPFRMKQGSYSTGFPVAKPCFS 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 QPTSNMEPPKQIMSMEKTSKLNVVETSRLNHTEKLNQLENTFKSVIAQIGPGGTISSELK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 QPTSNMEPPKQIMSMEKTSKLNVVETSRLNHTEKLNQLENTFKSVIAQIGPGGTISSELK 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 HKIKFVVSKFPEGLFISKLLGEYEVIFKEQLSPKKLGFLNVTELVGALSDILHVEFRKGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 HKIKFVVSKFPEGLFISKLLGEYEVIFKEQLSPKKLGFLNVTELVGALSDILHVEFRKGH 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 QDLLVFDADKKPLPPVQSDKKIEAKACVSSPPRNSLSTAAVKETVWNCPSKKQKEPQQKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 QDLLVFDADKKPLPPVQSDKKIEAKACVSSPPRNSLSTAAVKETVWNCPSKKQKEPQQKI 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE4 CKKPNLVVKPLQLQVETNKSELNLAMANHDIPPDAVPNKKLCRLPPLDTSSLIGVFVEYI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 CKKPNLVVKPLQLQVETNKSELNLAMANHDIPPDAVPNKKLCRLPPLDTSSLIGVFVEYI 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE4 ISPSQFYIRIYSRDSSELLEDMMIEMRRCYSNQLVSDRYVMPECFIQPGHLCCVRISEDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 ISPSQFYIRIYSRDSSELLEDMMIEMRRCYSNQLVSDRYVMPECFIQPGHLCCVRISEDK 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE4 WWYRVIIHRVLEKQEVEVFYPDFGNIGIVQKSSLRFLKCCYTKLPAQAIPCSLAWVRPVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 WWYRVIIHRVLEKQEVEVFYPDFGNIGIVQKSSLRFLKCCYTKLPAQAIPCSLAWVRPVE 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE4 EHWTSKAILQFQKLCGLKPLVGVVDEYVDGILNIFLCDTSSNEDVYFHHVLRTEGHAIVC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 EHWTSKAILQFQKLCGLKPLVGVVDEYVDGILNIFLCDTSSNEDVYFHHVLRTEGHAIVC 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE4 RENISSKGFSELNPLALYTTSSGGPEDIVLTELGYPSQQHYFNEDRKISPQSKESELRIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 RENISSKGFSELNPLALYTTSSGGPEDIVLTELGYPSQQHYFNEDRKISPQSKESELRIL 670 680 690 700 710 720 pF1KE4 ------------------------------------------------------DEIPTG :::::: CCDS55 QDINDEKSLSHLKSESKEPLKDSEFESLKTCNKSFEEDPKWSNPEPNDLKEENEDEIPTG 730 740 750 760 770 780 730 740 750 760 770 780 pF1KE4 MPCLESVTIGDDIWDENWLPLQAKMGKGGDAASHLFTASLGGKNQYSSCKEMPQKDWCFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 MPCLESVTIGDDIWDENWLPLQAKMGKGGDAASHLFTASLGGKNQYSSCKEMPQKDWCFS 790 800 810 820 830 840 790 800 810 820 830 840 pF1KE4 TPKDTWDDSWQPSGLVNGTKVEVHKPEVLGAQEKNTGTNRTQKQLDINGSSDSSTLPKLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 TPKDTWDDSWQPSGLVNGTKVEVHKPEVLGAQEKNTGTNRTQKQLDINGSSDSSTLPKLE 850 860 870 880 890 900 850 860 870 880 890 900 pF1KE4 EFCTSLTQSEQSADGSQSEPNNSQTQPKQIQLSTAAPCSTTAVDDSAEKPSGSVESSPEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 EFCTSLTQSEQSADGSQSEPNNSQTQPKQIQLSTAAPCSTTAVDDSAEKPSGSVESSPEI 910 920 930 940 950 960 910 920 930 940 950 960 pF1KE4 LKNEDFSSSRAITLYKDKRQESVDQLSLILSYECQISQKLYIPRSTATAALGAAARLATS ::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 LKNEDFSSSRAITLYKDKRQESVDQLSLILSYECQISQKLYIPRSTATAALGAAARLATS 970 980 990 1000 1010 1020 970 980 pF1KE4 RSLLHWYPSVKRMEA CCDS55 RSLLHWYPSVKRMEA 1030 >>CCDS77385.1 TDRD15 gene_id:100129278|Hs108|chr2 (1934 aa) initn: 228 init1: 147 opt: 295 Z-score: 309.1 bits: 69.6 E(32554): 6.7e-11 Smith-Waterman score: 295; 25.2% identity (56.9% similar) in 325 aa overlap (398-705:400-712) 370 380 390 400 410 420 pF1KE4 ADKKPLPPVQSDKKIEAKACVSSPPRNSLSTAAVKETVWNCPSKKQKEPQQKICKKPNLV : ..:.. : . : .: : CCDS77 QLSIFKQALLGQVVYAHIDWFNKDECLYYVTLQTQESTVNSKCLLKTVGTQVLC--PMSD 370 380 390 400 410 420 430 440 450 460 470 pF1KE4 VKPLQLQVETNKSELN-LA----MANHDIPPDAVPNKKLCRLP-PLDTSSL-----IGVF : .. ::. :..: .: :.: . :.. .: . .. :. : .. .: CCDS77 SKISNILSETSVSDVNSFAVESFMGNIEWSIDSLNKKGILKVGFPIKTVQMEIEAAYIAF 430 440 450 460 470 480 480 490 500 510 520 530 pF1KE4 VEYIISPSQFYIRIYSRDSSELLEDMMIEMRRCYSNQLVSDRYVM--PECFIQPGHLCCV . :...::.:..: . : . ....: .. . : . .:.... :: :: .::. CCDS77 IAYVLNPSNFWVR--TNDHRNEFQEIMKNINKFY-DLCENDEMILRKPE----PGLFCCA 490 500 510 520 530 540 540 550 560 570 580 590 pF1KE4 RISEDKWWYRVIIHRVLEKQEVEVFYPDFGNIGIVQKSSLRFLKCCYTKLPAQAIPCSLA : :.:. .::..: .. . ...:.. :.:: . ....: . .::: :. :::: CCDS77 RYSKDRRFYRAVITEI-NGYKINVYFLDYGNTDSIPFFDVKILLPEFCELPALAMCCSLA 550 560 570 580 590 600 610 620 630 640 650 pF1KE4 WVRPVEEHWTSKAILQFQKLCGLKP-LVGVVDEYVDGI-LNIFLCDTSSNEDVYFHHVLR . :::. ::. :: :.:: : :. :. . : .:: ..: : :: .. CCDS77 HIFPVEDLWTKAAIDYFKKLVLNKAILLQVIAKKDDKYTVNIQSVEASENIDVI--SLML 600 610 620 630 640 650 660 670 680 690 700 710 pF1KE4 TEGHAIVCRENIS--SKGFSELNPLALYTTSSGGPEDIVLTELGYPSQQHYFNEDRKISP :.: . .. :. :: . : . .. . . .. . : :....: ... CCDS77 QAGYAEYFQVELEYFPKSVSEYSMLNSESKNKVNIKKVISALLEGPKSKKYHSNNLVENN 660 670 680 690 700 710 720 730 740 750 760 770 pF1KE4 QSKESELRILDEIPTGMPCLESVTIGDDIWDENWLPLQAKMGKGGDAASHLFTASLGGKN CCDS77 LSLPKSLAVNISEFKNPFTLSVGPESSWPYKEYIFRPGTVLEVKCSCYYGPGDFSCQLQC 720 730 740 750 760 770 >>CCDS41395.1 TDRKH gene_id:11022|Hs108|chr1 (516 aa) initn: 144 init1: 144 opt: 286 Z-score: 309.0 bits: 67.7 E(32554): 6.9e-11 Smith-Waterman score: 286; 29.9% identity (58.8% similar) in 221 aa overlap (455-664:241-454) 430 440 450 460 470 480 pF1KE4 NLVVKPLQLQVETNKSELNLAMANHDIPPDAVPNKKLCRLPPLDTSSLIGVFVEYIIS-- :.:. . ..: : : ..: .: CCDS41 KGGGDMAVVVSKEGSWEKPSDDSFQKSEAQAIPEMPMFEIPSPDFSFHADEYLEVYVSAS 220 230 240 250 260 270 490 500 510 520 530 540 pF1KE4 --PSQFYIRIYSRDSSELLEDMMIEMRRCYSNQLVSDRYVMPECFIQPGHLCCVRISEDK :..:.:.: . : .: . .. :: . : :.. : : . : . . . . CCDS41 EHPNHFWIQIVGSRSLQL-DKLVNEMTQHYENSVPEDLTV------HVGDIVAAPLPTNG 280 290 300 310 320 550 560 570 580 590 600 pF1KE4 WWYRVIIHRVLEKQEVEVFYPDFGNIGIVQKSSLRFLKCCYTKLPAQAIPCSLAWVRPVE :::. . .::. ...... :::. : ..:: :. . .:: ::: :::: . : CCDS41 SWYRARVLGTLENGNLDLYFVDFGDNGDCPLKDLRALRSDFLSLPFQAIECSLARIAPSG 330 340 350 360 370 380 610 620 630 640 650 pF1KE4 EHWTSKAILQFQKL--CG-LKPLVGVVDEYVD-GILN---IFLCDTSSNEDVYFHHVLRT ..: .:. .:..: :. ::::. .. ::. :: . :.: :::... . . : CCDS41 DQWEEEALDEFDRLTHCADWKPLVAKISSYVQTGISTWPKIYLYDTSNGKKLDIGLELVH 390 400 410 420 430 440 660 670 680 690 700 710 pF1KE4 EGHAIVCRENISSKGFSELNPLALYTTSSGGPEDIVLTELGYPSQQHYFNEDRKISPQSK .:.:: :.: CCDS41 KGYAIELPEDIEENRAVPDMLKDMATETDASLSTLLTETKKSSGEITHTLSCLSLSEAAS 450 460 470 480 490 500 >>CCDS41394.1 TDRKH gene_id:11022|Hs108|chr1 (561 aa) initn: 144 init1: 144 opt: 286 Z-score: 308.4 bits: 67.7 E(32554): 7.4e-11 Smith-Waterman score: 286; 29.9% identity (58.8% similar) in 221 aa overlap (455-664:286-499) 430 440 450 460 470 480 pF1KE4 NLVVKPLQLQVETNKSELNLAMANHDIPPDAVPNKKLCRLPPLDTSSLIGVFVEYIIS-- :.:. . ..: : : ..: .: CCDS41 KGGGDMAVVVSKEGSWEKPSDDSFQKSEAQAIPEMPMFEIPSPDFSFHADEYLEVYVSAS 260 270 280 290 300 310 490 500 510 520 530 540 pF1KE4 --PSQFYIRIYSRDSSELLEDMMIEMRRCYSNQLVSDRYVMPECFIQPGHLCCVRISEDK :..:.:.: . : .: . .. :: . : :.. : : . : . . . . CCDS41 EHPNHFWIQIVGSRSLQL-DKLVNEMTQHYENSVPEDLTV------HVGDIVAAPLPTNG 320 330 340 350 360 550 560 570 580 590 600 pF1KE4 WWYRVIIHRVLEKQEVEVFYPDFGNIGIVQKSSLRFLKCCYTKLPAQAIPCSLAWVRPVE :::. . .::. ...... :::. : ..:: :. . .:: ::: :::: . : CCDS41 SWYRARVLGTLENGNLDLYFVDFGDNGDCPLKDLRALRSDFLSLPFQAIECSLARIAPSG 370 380 390 400 410 420 610 620 630 640 650 pF1KE4 EHWTSKAILQFQKL--CG-LKPLVGVVDEYVD-GILN---IFLCDTSSNEDVYFHHVLRT ..: .:. .:..: :. ::::. .. ::. :: . :.: :::... . . : CCDS41 DQWEEEALDEFDRLTHCADWKPLVAKISSYVQTGISTWPKIYLYDTSNGKKLDIGLELVH 430 440 450 460 470 480 660 670 680 690 700 710 pF1KE4 EGHAIVCRENISSKGFSELNPLALYTTSSGGPEDIVLTELGYPSQQHYFNEDRKISPQSK .:.:: :.: CCDS41 KGYAIELPEDIEENRAVPDMLKDMATETDASLSTLLTETKKSSGEITHTLSCLSLSEAAS 490 500 510 520 530 540 >>CCDS7588.1 TDRD1 gene_id:56165|Hs108|chr10 (1189 aa) initn: 227 init1: 227 opt: 291 Z-score: 308.3 bits: 68.8 E(32554): 7.5e-11 Smith-Waterman score: 291; 24.9% identity (55.4% similar) in 325 aa overlap (424-728:659-963) 400 410 420 430 440 450 pF1KE4 NSLSTAAVKETVWNCPSKKQKEPQQKICKKPNLVVKPLQLQVETNKSELNLAMAN-HDIP :.. :. . :.. .: ... . :. CCDS75 KLVQNKIITVKVVDKLENSSLVELIDKSETPHVSVSKVLLDAGFAVGEQSMVTDKPSDVK 630 640 650 660 670 680 460 470 480 490 500 pF1KE4 PDAVPNKKLCRLPPLD-------TSSLIGVFVEYIISPSQFYIRIYSRDSSELLEDMMIE .:: .. ::. ... . : : : ::..:: .. ..:. . :.:. CCDS75 ETSVPLGVEGKVNPLEWTWVELGVDQTVDVVVCVIYSPGEFYCHVLKEDALKKLNDLNKS 690 700 710 720 730 740 510 520 530 540 550 560 pF1KE4 M-RRCYSNQLVSDRYVMPECF-IQPGHLCCVRISEDKWWYRVIIHRVLEKQEVEVFYPDF . ..: .. .:. : . :. ::. .. : :::......: . .:.: . :. CCDS75 LAEHCQQK--------LPNGFKAEIGQPCCAFFAGDGSWYRALVKEILPNGHVKVHFVDY 750 760 770 780 790 800 570 580 590 600 610 620 pF1KE4 GNIGIVQKSSLRFLKCCYTKLPAQAIPCSLAWVRPVEEHWTSKAILQFQKLC--GLKPLV ::: : . ::... . .:: :.: :.:: .. ..::. .:: .:: .: :.: . CCDS75 GNIEEVTADELRMISSTFLNLPFQGIRCQLADIQSRNKHWSEEAITRFQ-MCVAGIKLQA 810 820 830 840 850 630 640 650 660 670 pF1KE4 GVVDEYVDGILNIFLCDTSSN-----EDVYF--HHVLRTEG-HAIVCRENISSKGFSELN ::. .:: .. : : :. :: . : ::.. . : . . . .: ... CCDS75 RVVEVTENGI-GVELTDLSTCYPRIISDVLIDEHLVLKSASPHKDLPNDRLVNKHELQVH 860 870 880 890 900 910 680 690 700 710 720 730 pF1KE4 PLALYTTSSGGPEDIVLTELGYPSQQHYFNEDRKISPQSKESELRILDEIPTGMPCLESV .: .:::. . . : . .. :::. .. .: ::: CCDS75 VQGLQATSSAEQWKTIELPVDKTIQANVLE---IISPN-------LFYALPKGMPENQEK 920 930 940 950 960 740 750 760 770 780 790 pF1KE4 TIGDDIWDENWLPLQAKMGKGGDAASHLFTASLGGKNQYSSCKEMPQKDWCFSTPKDTWD CCDS75 LCMLTAELLEYCNAPKSRPPYRPRIGDACCAKYTSDDFWYRAVVLGTSDTDVEVLYADYG 970 980 990 1000 1010 1020 981 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 16:46:22 2016 done: Mon Nov 7 16:46:22 2016 Total Scan time: 4.220 Total Display time: 0.100 Function used was FASTA [36.3.4 Apr, 2011]