FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE0987, 616 aa 1>>>pF1KE0987 616 - 616 aa - 616 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 10.2839+/-0.00056; mu= -3.4622+/- 0.034 mean_var=709.2925+/-162.280, 0's: 0 Z-trim(117.7): 884 B-trim: 0 in 0/52 Lambda= 0.048157 statistics sampled from 28717 (29905) to 28717 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.698), E-opt: 0.2 (0.351), width: 16 Scan time: 9.590 The best scores are: opt bits E(85289) NP_653286 (OMIM: 611712) homeodomain-interacting p ( 616) 4208 308.9 3.4e-83 XP_006723099 (OMIM: 611712) PREDICTED: homeodomain ( 619) 4192 307.8 7.3e-83 NP_001106710 (OMIM: 606868) homeodomain-interactin (1171) 1139 96.1 7.1e-19 XP_016867558 (OMIM: 606868) PREDICTED: homeodomain (1191) 1139 96.1 7.2e-19 XP_006715998 (OMIM: 606868) PREDICTED: homeodomain (1191) 1139 96.1 7.2e-19 NP_073577 (OMIM: 606868) homeodomain-interacting p (1198) 1139 96.1 7.2e-19 XP_011514383 (OMIM: 606868) PREDICTED: homeodomain (1206) 1139 96.2 7.2e-19 XP_011514382 (OMIM: 606868) PREDICTED: homeodomain (1349) 1139 96.2 7.6e-19 XP_011514381 (OMIM: 606868) PREDICTED: homeodomain (1350) 1139 96.2 7.6e-19 XP_011514380 (OMIM: 606868) PREDICTED: homeodomain (1376) 1139 96.2 7.7e-19 XP_011514379 (OMIM: 606868) PREDICTED: homeodomain (1377) 1139 96.2 7.7e-19 XP_016856095 (OMIM: 608003) PREDICTED: homeodomain ( 605) 1130 95.0 7.9e-19 NP_689909 (OMIM: 608003) homeodomain-interacting p (1075) 1134 95.7 8.6e-19 XP_016856094 (OMIM: 608003) PREDICTED: homeodomain (1209) 1134 95.8 9.2e-19 XP_005270669 (OMIM: 608003) PREDICTED: homeodomain (1210) 1134 95.8 9.2e-19 XP_005270670 (OMIM: 608003) PREDICTED: homeodomain (1210) 1134 95.8 9.2e-19 NP_938009 (OMIM: 608003) homeodomain-interacting p (1210) 1134 95.8 9.2e-19 XP_006710506 (OMIM: 608003) PREDICTED: homeodomain (1247) 1134 95.8 9.3e-19 XP_005270668 (OMIM: 608003) PREDICTED: homeodomain (1256) 1134 95.8 9.3e-19 XP_005270667 (OMIM: 608003) PREDICTED: homeodomain (1280) 1134 95.8 9.4e-19 XP_005270666 (OMIM: 608003) PREDICTED: homeodomain (1281) 1134 95.8 9.4e-19 NP_001265092 (OMIM: 604424) homeodomain-interactin (1194) 1095 93.1 6e-18 XP_016872566 (OMIM: 604424) PREDICTED: homeodomain (1194) 1095 93.1 6e-18 NP_001265091 (OMIM: 604424) homeodomain-interactin (1194) 1095 93.1 6e-18 NP_001041665 (OMIM: 604424) homeodomain-interactin (1194) 1095 93.1 6e-18 XP_005252786 (OMIM: 604424) PREDICTED: homeodomain (1215) 1095 93.1 6e-18 XP_016872565 (OMIM: 604424) PREDICTED: homeodomain (1215) 1095 93.1 6e-18 NP_005725 (OMIM: 604424) homeodomain-interacting p (1215) 1095 93.1 6e-18 XP_011539279 (OMIM: 608003) PREDICTED: homeodomain (1241) 841 75.5 1.2e-12 NP_569122 (OMIM: 600855,614104) dual specificity t ( 529) 645 61.2 1e-08 NP_567824 (OMIM: 600855,614104) dual specificity t ( 584) 645 61.3 1.1e-08 XP_011527787 (OMIM: 600855,614104) PREDICTED: dual ( 725) 645 61.5 1.2e-08 XP_016883775 (OMIM: 600855,614104) PREDICTED: dual ( 734) 645 61.5 1.2e-08 NP_569120 (OMIM: 600855,614104) dual specificity t ( 754) 645 61.5 1.2e-08 XP_006724042 (OMIM: 600855,614104) PREDICTED: dual ( 754) 645 61.5 1.2e-08 XP_016883773 (OMIM: 600855,614104) PREDICTED: dual ( 754) 645 61.5 1.2e-08 XP_016883774 (OMIM: 600855,614104) PREDICTED: dual ( 754) 645 61.5 1.2e-08 XP_011527786 (OMIM: 600855,614104) PREDICTED: dual ( 761) 645 61.5 1.2e-08 XP_006724040 (OMIM: 600855,614104) PREDICTED: dual ( 763) 645 61.5 1.2e-08 XP_006724041 (OMIM: 600855,614104) PREDICTED: dual ( 763) 645 61.5 1.2e-08 NP_001387 (OMIM: 600855,614104) dual specificity t ( 763) 645 61.5 1.2e-08 XP_006724039 (OMIM: 600855,614104) PREDICTED: dual ( 763) 645 61.5 1.2e-08 XP_011527785 (OMIM: 600855,614104) PREDICTED: dual ( 763) 645 61.5 1.2e-08 XP_011527784 (OMIM: 600855,614104) PREDICTED: dual ( 770) 645 61.5 1.2e-08 NP_003836 (OMIM: 609181) dual specificity tyrosine ( 520) 622 59.6 3.1e-08 NP_006474 (OMIM: 604556,615812) dual specificity t ( 589) 620 59.6 3.6e-08 NP_006475 (OMIM: 604556,615812) dual specificity t ( 601) 613 59.1 5.1e-08 NP_004705 (OMIM: 604556,615812) dual specificity t ( 629) 613 59.1 5.2e-08 XP_005259455 (OMIM: 604556,615812) PREDICTED: dual ( 629) 613 59.1 5.2e-08 NP_003574 (OMIM: 603496) dual specificity tyrosine ( 528) 588 57.3 1.6e-07 >>NP_653286 (OMIM: 611712) homeodomain-interacting prote (616 aa) initn: 4208 init1: 4208 opt: 4208 Z-score: 1614.7 bits: 308.9 E(85289): 3.4e-83 Smith-Waterman score: 4208; 100.0% identity (100.0% similar) in 616 aa overlap (1-616:1-616) 10 20 30 40 50 60 pF1KE0 MSTIQSETDCYDIIEVLGKGTFGEVAKGWRRSTGEMVAIKILKNDAYRNRIIKNELKLLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_653 MSTIQSETDCYDIIEVLGKGTFGEVAKGWRRSTGEMVAIKILKNDAYRNRIIKNELKLLH 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 CMRGLDPEEAHVIRFLEFFHDALKFYLVFELLEQNLFEFQKENNFAPLPARHIRTVTLQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_653 CMRGLDPEEAHVIRFLEFFHDALKFYLVFELLEQNLFEFQKENNFAPLPARHIRTVTLQV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE0 LTALARLKELAIIHADLKPENIMLVDQTRCPFRVKVIDFGSASIFSEVRYVKEPYIQSRF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_653 LTALARLKELAIIHADLKPENIMLVDQTRCPFRVKVIDFGSASIFSEVRYVKEPYIQSRF 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE0 YRAPEILLGLPFCEKVDVWSLGCVMAELHLGWPLYPGNNEYDQVRYICETQGLPKPHLLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_653 YRAPEILLGLPFCEKVDVWSLGCVMAELHLGWPLYPGNNEYDQVRYICETQGLPKPHLLH 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE0 AACKAHHFFKRNPHPDAANPWQLKSSADYLAETKVRPLERRKYMLKSLDQIETVNGGSVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_653 AACKAHHFFKRNPHPDAANPWQLKSSADYLAETKVRPLERRKYMLKSLDQIETVNGGSVA 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE0 SRLTFPDREALAEHADLKSMVELIKRMLTWESHERISPSAALRHPFVSMQQLRSAHETTH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_653 SRLTFPDREALAEHADLKSMVELIKRMLTWESHERISPSAALRHPFVSMQQLRSAHETTH 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE0 YYQLSLRSYRLSLQVEGKPPTPVVAAEDGTPYYCLAEEKEAAGMGSVAGSSPFFREEKAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_653 YYQLSLRSYRLSLQVEGKPPTPVVAAEDGTPYYCLAEEKEAAGMGSVAGSSPFFREEKAP 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE0 GMQRAIDQLDDLSLQEAGHGLWGETCTNAVSDMMVPLKAAITGHHVPDSGPEPILAFYSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_653 GMQRAIDQLDDLSLQEAGHGLWGETCTNAVSDMMVPLKAAITGHHVPDSGPEPILAFYSS 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE0 RLAGRHKARKPPAGSKSDSNFSNLIRLSQVSPEDDRPCRGSSWEEGEHLGASAEPLAILQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_653 RLAGRHKARKPPAGSKSDSNFSNLIRLSQVSPEDDRPCRGSSWEEGEHLGASAEPLAILQ 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE0 RDEDGPNIDNMTMEAERPDPELFDPSSCPGEWLSEPDCTLESVRGPRAQGLPPRRSHQHG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_653 RDEDGPNIDNMTMEAERPDPELFDPSSCPGEWLSEPDCTLESVRGPRAQGLPPRRSHQHG 550 560 570 580 590 600 610 pF1KE0 PPRGATSFLQHVTGHH :::::::::::::::: NP_653 PPRGATSFLQHVTGHH 610 >>XP_006723099 (OMIM: 611712) PREDICTED: homeodomain-int (619 aa) initn: 3752 init1: 3752 opt: 4192 Z-score: 1608.7 bits: 307.8 E(85289): 7.3e-83 Smith-Waterman score: 4192; 99.5% identity (99.5% similar) in 619 aa overlap (1-616:1-619) 10 20 30 40 50 60 pF1KE0 MSTIQSETDCYDIIEVLGKGTFGEVAKGWRRSTGEMVAIKILKNDAYRNRIIKNELKLLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 MSTIQSETDCYDIIEVLGKGTFGEVAKGWRRSTGEMVAIKILKNDAYRNRIIKNELKLLH 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 CMRGLDPEEAHVIRFLEFFHDALKFYLVFELLEQNLFEFQKENNFAPLPARHIRTVTLQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 CMRGLDPEEAHVIRFLEFFHDALKFYLVFELLEQNLFEFQKENNFAPLPARHIRTVTLQV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE0 LTALARLKELAIIHADLKPENIMLVDQTRCPFRVKVIDFGSASIFSEVRYVKEPYIQSRF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 LTALARLKELAIIHADLKPENIMLVDQTRCPFRVKVIDFGSASIFSEVRYVKEPYIQSRF 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE0 YRAPEILLGLPFCEKVDVWSLGCVMAELHLGWPLYPGNNEYDQVRYICETQGLPKPHLLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 YRAPEILLGLPFCEKVDVWSLGCVMAELHLGWPLYPGNNEYDQVRYICETQGLPKPHLLH 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE0 AACKAHHFFKRNPHPDAANPWQLKSSADYLAETKVRPLERRKYMLKSLDQIETVNGGSVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 AACKAHHFFKRNPHPDAANPWQLKSSADYLAETKVRPLERRKYMLKSLDQIETVNGGSVA 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE0 SRLTFPDREALAEHADLKSMVELIKRMLTWESHERISPSAALRHPFVSMQQLRSAHETTH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 SRLTFPDREALAEHADLKSMVELIKRMLTWESHERISPSAALRHPFVSMQQLRSAHETTH 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE0 YYQLSLRSYRLSLQVEGKPPTPVVAAEDGTPYYCLAEEKEAAGMGSVAGSSPFFREEKAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 YYQLSLRSYRLSLQVEGKPPTPVVAAEDGTPYYCLAEEKEAAGMGSVAGSSPFFREEKAP 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE0 GMQRAIDQLDDLSLQEAGHGLWGETCTNAVSDMMVPLKAAITGHHVPDSGPEPILAFYSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 GMQRAIDQLDDLSLQEAGHGLWGETCTNAVSDMMVPLKAAITGHHVPDSGPEPILAFYSS 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE0 RLAGRHKARKPPAGSKSDSNFSNLIRLSQVSPEDDRPCRGSSWEEGEHLGASAEPLAILQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 RLAGRHKARKPPAGSKSDSNFSNLIRLSQVSPEDDRPCRGSSWEEGEHLGASAEPLAILQ 490 500 510 520 530 540 550 560 570 580 590 pF1KE0 RDEDGPNIDNMTMEAE---RPDPELFDPSSCPGEWLSEPDCTLESVRGPRAQGLPPRRSH :::::::::::::::: ::::::::::::::::::::::::::::::::::::::::: XP_006 RDEDGPNIDNMTMEAEVSRRPDPELFDPSSCPGEWLSEPDCTLESVRGPRAQGLPPRRSH 550 560 570 580 590 600 600 610 pF1KE0 QHGPPRGATSFLQHVTGHH ::::::::::::::::::: XP_006 QHGPPRGATSFLQHVTGHH 610 >>NP_001106710 (OMIM: 606868) homeodomain-interacting pr (1171 aa) initn: 1146 init1: 532 opt: 1139 Z-score: 459.9 bits: 96.1 E(85289): 7.1e-19 Smith-Waterman score: 1139; 50.6% identity (74.4% similar) in 356 aa overlap (6-360:194-540) 10 20 30 pF1KE0 MSTIQSETDCYDIIEVLGKGTFGEVAKGWRRSTGE : :. :...: ::.::::.:.: :.:.:.: NP_001 ATATTSTATSKNSGSNSEGDYQLVQHEVLCSMTNTYEVLEFLGRGTFGQVVKCWKRGTNE 170 180 190 200 210 220 40 50 60 70 80 90 pF1KE0 MVAIKILKNDAYRNRIIKNELKLLHCMRGLDPEEAHVIRFLEFFHDALKFYLVFELLEQN .:::::::: : . :...: . . .. . .: : :. . ::::.:::: NP_001 IVAIKILKNHPSYARQGQIEVSILARLSTESADDYNFVRAYECFQHKNHTCLVFEMLEQN 230 240 250 260 270 280 100 110 120 130 140 150 pF1KE0 LFEFQKENNFAPLPARHIRTVTLQVLTALARLKELAIIHADLKPENIMLVDQTRCPFRVK :..: :.:.:.::: ..:: : :: ::: .:: :..:::::::::::::: .: :.::: NP_001 LYDFLKQNKFSPLPLKYIRPVLQQVATALMKLKSLGLIHADLKPENIMLVDPSRQPYRVK 290 300 310 320 330 340 160 170 180 190 200 210 pF1KE0 VIDFGSASIFSEVRYVKEPYIQSRFYRAPEILLGLPFCEKVDVWSLGCVMAELHLGWPLY :::::::: :.. : :.:::.::::::.::::::: .:.::::::.::: :::::: NP_001 VIDFGSASHVSKA--VCSTYLQSRYYRAPEIILGLPFCEAIDMWSLGCVIAELFLGWPLY 350 360 370 380 390 400 220 230 240 250 260 270 pF1KE0 PGNNEYDQVRYICETQGLPKPHLLHAACKAHHFFKRNPHPDAANP-WQLKSSADYLAETK :: .::::.::: .::::: .:: :. :. .::.:. :. : :.::. :. ::: NP_001 PGASEYDQIRYISQTQGLPAEYLLSAGTKTTRFFNRDT--DSPYPLWRLKTPDDHEAETG 410 420 430 440 450 280 290 300 310 320 330 pF1KE0 VRPLERRKYMLKSLDQIETVNGGSVASRLTFPDREALAEHADLKSMVELIKRMLTWESHE .. : :::... ::.. :: ... : : :.:.:: . ...:.:.::: .. . NP_001 IKSKEARKYIFNCLDDMAQVN---MTTDLEGSD--MLVEKADRREFIDLLKKMLTIDADK 460 470 480 490 500 510 340 350 360 370 380 390 pF1KE0 RISPSAALRHPFVSMQQLRSAHETTHYYQLSLRSYRLSLQVEGKPPTPVVAAEDGTPYYC ::.: .: ::::.: .: . ..:: NP_001 RITPIETLNHPFVTMTHLLDFPHSTHVKSCFQNMEICKRRVNMYDTVNQSKTPFITHVAP 520 530 540 550 560 570 >>XP_016867558 (OMIM: 606868) PREDICTED: homeodomain-int (1191 aa) initn: 1146 init1: 532 opt: 1139 Z-score: 459.8 bits: 96.1 E(85289): 7.2e-19 Smith-Waterman score: 1139; 50.6% identity (74.4% similar) in 356 aa overlap (6-360:187-533) 10 20 30 pF1KE0 MSTIQSETDCYDIIEVLGKGTFGEVAKGWRRSTGE : :. :...: ::.::::.:.: :.:.:.: XP_016 ATATTSTATSKNSGSNSEGDYQLVQHEVLCSMTNTYEVLEFLGRGTFGQVVKCWKRGTNE 160 170 180 190 200 210 40 50 60 70 80 90 pF1KE0 MVAIKILKNDAYRNRIIKNELKLLHCMRGLDPEEAHVIRFLEFFHDALKFYLVFELLEQN .:::::::: : . :...: . . .. . .: : :. . ::::.:::: XP_016 IVAIKILKNHPSYARQGQIEVSILARLSTESADDYNFVRAYECFQHKNHTCLVFEMLEQN 220 230 240 250 260 270 100 110 120 130 140 150 pF1KE0 LFEFQKENNFAPLPARHIRTVTLQVLTALARLKELAIIHADLKPENIMLVDQTRCPFRVK :..: :.:.:.::: ..:: : :: ::: .:: :..:::::::::::::: .: :.::: XP_016 LYDFLKQNKFSPLPLKYIRPVLQQVATALMKLKSLGLIHADLKPENIMLVDPSRQPYRVK 280 290 300 310 320 330 160 170 180 190 200 210 pF1KE0 VIDFGSASIFSEVRYVKEPYIQSRFYRAPEILLGLPFCEKVDVWSLGCVMAELHLGWPLY :::::::: :.. : :.:::.::::::.::::::: .:.::::::.::: :::::: XP_016 VIDFGSASHVSKA--VCSTYLQSRYYRAPEIILGLPFCEAIDMWSLGCVIAELFLGWPLY 340 350 360 370 380 390 220 230 240 250 260 270 pF1KE0 PGNNEYDQVRYICETQGLPKPHLLHAACKAHHFFKRNPHPDAANP-WQLKSSADYLAETK :: .::::.::: .::::: .:: :. :. .::.:. :. : :.::. :. ::: XP_016 PGASEYDQIRYISQTQGLPAEYLLSAGTKTTRFFNRDT--DSPYPLWRLKTPDDHEAETG 400 410 420 430 440 450 280 290 300 310 320 330 pF1KE0 VRPLERRKYMLKSLDQIETVNGGSVASRLTFPDREALAEHADLKSMVELIKRMLTWESHE .. : :::... ::.. :: ... : : :.:.:: . ...:.:.::: .. . XP_016 IKSKEARKYIFNCLDDMAQVN---MTTDLEGSD--MLVEKADRREFIDLLKKMLTIDADK 460 470 480 490 500 340 350 360 370 380 390 pF1KE0 RISPSAALRHPFVSMQQLRSAHETTHYYQLSLRSYRLSLQVEGKPPTPVVAAEDGTPYYC ::.: .: ::::.: .: . ..:: XP_016 RITPIETLNHPFVTMTHLLDFPHSTHVKSCFQNMEICKRRVNMYDTVNQSKTPFITHVAP 510 520 530 540 550 560 >>XP_006715998 (OMIM: 606868) PREDICTED: homeodomain-int (1191 aa) initn: 1146 init1: 532 opt: 1139 Z-score: 459.8 bits: 96.1 E(85289): 7.2e-19 Smith-Waterman score: 1139; 50.6% identity (74.4% similar) in 356 aa overlap (6-360:187-533) 10 20 30 pF1KE0 MSTIQSETDCYDIIEVLGKGTFGEVAKGWRRSTGE : :. :...: ::.::::.:.: :.:.:.: XP_006 ATATTSTATSKNSGSNSEGDYQLVQHEVLCSMTNTYEVLEFLGRGTFGQVVKCWKRGTNE 160 170 180 190 200 210 40 50 60 70 80 90 pF1KE0 MVAIKILKNDAYRNRIIKNELKLLHCMRGLDPEEAHVIRFLEFFHDALKFYLVFELLEQN .:::::::: : . :...: . . .. . .: : :. . ::::.:::: XP_006 IVAIKILKNHPSYARQGQIEVSILARLSTESADDYNFVRAYECFQHKNHTCLVFEMLEQN 220 230 240 250 260 270 100 110 120 130 140 150 pF1KE0 LFEFQKENNFAPLPARHIRTVTLQVLTALARLKELAIIHADLKPENIMLVDQTRCPFRVK :..: :.:.:.::: ..:: : :: ::: .:: :..:::::::::::::: .: :.::: XP_006 LYDFLKQNKFSPLPLKYIRPVLQQVATALMKLKSLGLIHADLKPENIMLVDPSRQPYRVK 280 290 300 310 320 330 160 170 180 190 200 210 pF1KE0 VIDFGSASIFSEVRYVKEPYIQSRFYRAPEILLGLPFCEKVDVWSLGCVMAELHLGWPLY :::::::: :.. : :.:::.::::::.::::::: .:.::::::.::: :::::: XP_006 VIDFGSASHVSKA--VCSTYLQSRYYRAPEIILGLPFCEAIDMWSLGCVIAELFLGWPLY 340 350 360 370 380 390 220 230 240 250 260 270 pF1KE0 PGNNEYDQVRYICETQGLPKPHLLHAACKAHHFFKRNPHPDAANP-WQLKSSADYLAETK :: .::::.::: .::::: .:: :. :. .::.:. :. : :.::. :. ::: XP_006 PGASEYDQIRYISQTQGLPAEYLLSAGTKTTRFFNRDT--DSPYPLWRLKTPDDHEAETG 400 410 420 430 440 450 280 290 300 310 320 330 pF1KE0 VRPLERRKYMLKSLDQIETVNGGSVASRLTFPDREALAEHADLKSMVELIKRMLTWESHE .. : :::... ::.. :: ... : : :.:.:: . ...:.:.::: .. . XP_006 IKSKEARKYIFNCLDDMAQVN---MTTDLEGSD--MLVEKADRREFIDLLKKMLTIDADK 460 470 480 490 500 340 350 360 370 380 390 pF1KE0 RISPSAALRHPFVSMQQLRSAHETTHYYQLSLRSYRLSLQVEGKPPTPVVAAEDGTPYYC ::.: .: ::::.: .: . ..:: XP_006 RITPIETLNHPFVTMTHLLDFPHSTHVKSCFQNMEICKRRVNMYDTVNQSKTPFITHVAP 510 520 530 540 550 560 >>NP_073577 (OMIM: 606868) homeodomain-interacting prote (1198 aa) initn: 1146 init1: 532 opt: 1139 Z-score: 459.8 bits: 96.1 E(85289): 7.2e-19 Smith-Waterman score: 1139; 50.6% identity (74.4% similar) in 356 aa overlap (6-360:194-540) 10 20 30 pF1KE0 MSTIQSETDCYDIIEVLGKGTFGEVAKGWRRSTGE : :. :...: ::.::::.:.: :.:.:.: NP_073 ATATTSTATSKNSGSNSEGDYQLVQHEVLCSMTNTYEVLEFLGRGTFGQVVKCWKRGTNE 170 180 190 200 210 220 40 50 60 70 80 90 pF1KE0 MVAIKILKNDAYRNRIIKNELKLLHCMRGLDPEEAHVIRFLEFFHDALKFYLVFELLEQN .:::::::: : . :...: . . .. . .: : :. . ::::.:::: NP_073 IVAIKILKNHPSYARQGQIEVSILARLSTESADDYNFVRAYECFQHKNHTCLVFEMLEQN 230 240 250 260 270 280 100 110 120 130 140 150 pF1KE0 LFEFQKENNFAPLPARHIRTVTLQVLTALARLKELAIIHADLKPENIMLVDQTRCPFRVK :..: :.:.:.::: ..:: : :: ::: .:: :..:::::::::::::: .: :.::: NP_073 LYDFLKQNKFSPLPLKYIRPVLQQVATALMKLKSLGLIHADLKPENIMLVDPSRQPYRVK 290 300 310 320 330 340 160 170 180 190 200 210 pF1KE0 VIDFGSASIFSEVRYVKEPYIQSRFYRAPEILLGLPFCEKVDVWSLGCVMAELHLGWPLY :::::::: :.. : :.:::.::::::.::::::: .:.::::::.::: :::::: NP_073 VIDFGSASHVSKA--VCSTYLQSRYYRAPEIILGLPFCEAIDMWSLGCVIAELFLGWPLY 350 360 370 380 390 400 220 230 240 250 260 270 pF1KE0 PGNNEYDQVRYICETQGLPKPHLLHAACKAHHFFKRNPHPDAANP-WQLKSSADYLAETK :: .::::.::: .::::: .:: :. :. .::.:. :. : :.::. :. ::: NP_073 PGASEYDQIRYISQTQGLPAEYLLSAGTKTTRFFNRDT--DSPYPLWRLKTPDDHEAETG 410 420 430 440 450 280 290 300 310 320 330 pF1KE0 VRPLERRKYMLKSLDQIETVNGGSVASRLTFPDREALAEHADLKSMVELIKRMLTWESHE .. : :::... ::.. :: ... : : :.:.:: . ...:.:.::: .. . NP_073 IKSKEARKYIFNCLDDMAQVN---MTTDLEGSD--MLVEKADRREFIDLLKKMLTIDADK 460 470 480 490 500 510 340 350 360 370 380 390 pF1KE0 RISPSAALRHPFVSMQQLRSAHETTHYYQLSLRSYRLSLQVEGKPPTPVVAAEDGTPYYC ::.: .: ::::.: .: . ..:: NP_073 RITPIETLNHPFVTMTHLLDFPHSTHVKSCFQNMEICKRRVNMYDTVNQSKTPFITHVAP 520 530 540 550 560 570 >>XP_011514383 (OMIM: 606868) PREDICTED: homeodomain-int (1206 aa) initn: 1146 init1: 532 opt: 1139 Z-score: 459.7 bits: 96.2 E(85289): 7.2e-19 Smith-Waterman score: 1139; 50.6% identity (74.4% similar) in 356 aa overlap (6-360:202-548) 10 20 30 pF1KE0 MSTIQSETDCYDIIEVLGKGTFGEVAKGWRRSTGE : :. :...: ::.::::.:.: :.:.:.: XP_011 ATATTSTATSKNSGSNSEGDYQLVQHEVLCSMTNTYEVLEFLGRGTFGQVVKCWKRGTNE 180 190 200 210 220 230 40 50 60 70 80 90 pF1KE0 MVAIKILKNDAYRNRIIKNELKLLHCMRGLDPEEAHVIRFLEFFHDALKFYLVFELLEQN .:::::::: : . :...: . . .. . .: : :. . ::::.:::: XP_011 IVAIKILKNHPSYARQGQIEVSILARLSTESADDYNFVRAYECFQHKNHTCLVFEMLEQN 240 250 260 270 280 290 100 110 120 130 140 150 pF1KE0 LFEFQKENNFAPLPARHIRTVTLQVLTALARLKELAIIHADLKPENIMLVDQTRCPFRVK :..: :.:.:.::: ..:: : :: ::: .:: :..:::::::::::::: .: :.::: XP_011 LYDFLKQNKFSPLPLKYIRPVLQQVATALMKLKSLGLIHADLKPENIMLVDPSRQPYRVK 300 310 320 330 340 350 160 170 180 190 200 210 pF1KE0 VIDFGSASIFSEVRYVKEPYIQSRFYRAPEILLGLPFCEKVDVWSLGCVMAELHLGWPLY :::::::: :.. : :.:::.::::::.::::::: .:.::::::.::: :::::: XP_011 VIDFGSASHVSKA--VCSTYLQSRYYRAPEIILGLPFCEAIDMWSLGCVIAELFLGWPLY 360 370 380 390 400 220 230 240 250 260 270 pF1KE0 PGNNEYDQVRYICETQGLPKPHLLHAACKAHHFFKRNPHPDAANP-WQLKSSADYLAETK :: .::::.::: .::::: .:: :. :. .::.:. :. : :.::. :. ::: XP_011 PGASEYDQIRYISQTQGLPAEYLLSAGTKTTRFFNRDT--DSPYPLWRLKTPDDHEAETG 410 420 430 440 450 460 280 290 300 310 320 330 pF1KE0 VRPLERRKYMLKSLDQIETVNGGSVASRLTFPDREALAEHADLKSMVELIKRMLTWESHE .. : :::... ::.. :: ... : : :.:.:: . ...:.:.::: .. . XP_011 IKSKEARKYIFNCLDDMAQVN---MTTDLEGSD--MLVEKADRREFIDLLKKMLTIDADK 470 480 490 500 510 520 340 350 360 370 380 390 pF1KE0 RISPSAALRHPFVSMQQLRSAHETTHYYQLSLRSYRLSLQVEGKPPTPVVAAEDGTPYYC ::.: .: ::::.: .: . ..:: XP_011 RITPIETLNHPFVTMTHLLDFPHSTHVKSCFQNMEICKRRVNMYDTVNQSKTPFITHVAP 530 540 550 560 570 580 >>XP_011514382 (OMIM: 606868) PREDICTED: homeodomain-int (1349 aa) initn: 1146 init1: 532 opt: 1139 Z-score: 459.3 bits: 96.2 E(85289): 7.6e-19 Smith-Waterman score: 1139; 50.6% identity (74.4% similar) in 356 aa overlap (6-360:373-719) 10 20 30 pF1KE0 MSTIQSETDCYDIIEVLGKGTFGEVAKGWRRSTGE : :. :...: ::.::::.:.: :.:.:.: XP_011 ATATTSTATSKNSGSNSEGDYQLVQHEVLCSMTNTYEVLEFLGRGTFGQVVKCWKRGTNE 350 360 370 380 390 400 40 50 60 70 80 90 pF1KE0 MVAIKILKNDAYRNRIIKNELKLLHCMRGLDPEEAHVIRFLEFFHDALKFYLVFELLEQN .:::::::: : . :...: . . .. . .: : :. . ::::.:::: XP_011 IVAIKILKNHPSYARQGQIEVSILARLSTESADDYNFVRAYECFQHKNHTCLVFEMLEQN 410 420 430 440 450 460 100 110 120 130 140 150 pF1KE0 LFEFQKENNFAPLPARHIRTVTLQVLTALARLKELAIIHADLKPENIMLVDQTRCPFRVK :..: :.:.:.::: ..:: : :: ::: .:: :..:::::::::::::: .: :.::: XP_011 LYDFLKQNKFSPLPLKYIRPVLQQVATALMKLKSLGLIHADLKPENIMLVDPSRQPYRVK 470 480 490 500 510 520 160 170 180 190 200 210 pF1KE0 VIDFGSASIFSEVRYVKEPYIQSRFYRAPEILLGLPFCEKVDVWSLGCVMAELHLGWPLY :::::::: :.. : :.:::.::::::.::::::: .:.::::::.::: :::::: XP_011 VIDFGSASHVSKA--VCSTYLQSRYYRAPEIILGLPFCEAIDMWSLGCVIAELFLGWPLY 530 540 550 560 570 580 220 230 240 250 260 270 pF1KE0 PGNNEYDQVRYICETQGLPKPHLLHAACKAHHFFKRNPHPDAANP-WQLKSSADYLAETK :: .::::.::: .::::: .:: :. :. .::.:. :. : :.::. :. ::: XP_011 PGASEYDQIRYISQTQGLPAEYLLSAGTKTTRFFNRDT--DSPYPLWRLKTPDDHEAETG 590 600 610 620 630 280 290 300 310 320 330 pF1KE0 VRPLERRKYMLKSLDQIETVNGGSVASRLTFPDREALAEHADLKSMVELIKRMLTWESHE .. : :::... ::.. :: ... : : :.:.:: . ...:.:.::: .. . XP_011 IKSKEARKYIFNCLDDMAQVN---MTTDLEGSD--MLVEKADRREFIDLLKKMLTIDADK 640 650 660 670 680 690 340 350 360 370 380 390 pF1KE0 RISPSAALRHPFVSMQQLRSAHETTHYYQLSLRSYRLSLQVEGKPPTPVVAAEDGTPYYC ::.: .: ::::.: .: . ..:: XP_011 RITPIETLNHPFVTMTHLLDFPHSTHVKSCFQNMEICKRRVNMYDTVNQSKTPFITHVAP 700 710 720 730 740 750 >>XP_011514381 (OMIM: 606868) PREDICTED: homeodomain-int (1350 aa) initn: 1146 init1: 532 opt: 1139 Z-score: 459.3 bits: 96.2 E(85289): 7.6e-19 Smith-Waterman score: 1139; 50.6% identity (74.4% similar) in 356 aa overlap (6-360:373-719) 10 20 30 pF1KE0 MSTIQSETDCYDIIEVLGKGTFGEVAKGWRRSTGE : :. :...: ::.::::.:.: :.:.:.: XP_011 ATATTSTATSKNSGSNSEGDYQLVQHEVLCSMTNTYEVLEFLGRGTFGQVVKCWKRGTNE 350 360 370 380 390 400 40 50 60 70 80 90 pF1KE0 MVAIKILKNDAYRNRIIKNELKLLHCMRGLDPEEAHVIRFLEFFHDALKFYLVFELLEQN .:::::::: : . :...: . . .. . .: : :. . ::::.:::: XP_011 IVAIKILKNHPSYARQGQIEVSILARLSTESADDYNFVRAYECFQHKNHTCLVFEMLEQN 410 420 430 440 450 460 100 110 120 130 140 150 pF1KE0 LFEFQKENNFAPLPARHIRTVTLQVLTALARLKELAIIHADLKPENIMLVDQTRCPFRVK :..: :.:.:.::: ..:: : :: ::: .:: :..:::::::::::::: .: :.::: XP_011 LYDFLKQNKFSPLPLKYIRPVLQQVATALMKLKSLGLIHADLKPENIMLVDPSRQPYRVK 470 480 490 500 510 520 160 170 180 190 200 210 pF1KE0 VIDFGSASIFSEVRYVKEPYIQSRFYRAPEILLGLPFCEKVDVWSLGCVMAELHLGWPLY :::::::: :.. : :.:::.::::::.::::::: .:.::::::.::: :::::: XP_011 VIDFGSASHVSKA--VCSTYLQSRYYRAPEIILGLPFCEAIDMWSLGCVIAELFLGWPLY 530 540 550 560 570 580 220 230 240 250 260 270 pF1KE0 PGNNEYDQVRYICETQGLPKPHLLHAACKAHHFFKRNPHPDAANP-WQLKSSADYLAETK :: .::::.::: .::::: .:: :. :. .::.:. :. : :.::. :. ::: XP_011 PGASEYDQIRYISQTQGLPAEYLLSAGTKTTRFFNRDT--DSPYPLWRLKTPDDHEAETG 590 600 610 620 630 280 290 300 310 320 330 pF1KE0 VRPLERRKYMLKSLDQIETVNGGSVASRLTFPDREALAEHADLKSMVELIKRMLTWESHE .. : :::... ::.. :: ... : : :.:.:: . ...:.:.::: .. . XP_011 IKSKEARKYIFNCLDDMAQVN---MTTDLEGSD--MLVEKADRREFIDLLKKMLTIDADK 640 650 660 670 680 690 340 350 360 370 380 390 pF1KE0 RISPSAALRHPFVSMQQLRSAHETTHYYQLSLRSYRLSLQVEGKPPTPVVAAEDGTPYYC ::.: .: ::::.: .: . ..:: XP_011 RITPIETLNHPFVTMTHLLDFPHSTHVKSCFQNMEICKRRVNMYDTVNQSKTPFITHVAP 700 710 720 730 740 750 >>XP_011514380 (OMIM: 606868) PREDICTED: homeodomain-int (1376 aa) initn: 1146 init1: 532 opt: 1139 Z-score: 459.2 bits: 96.2 E(85289): 7.7e-19 Smith-Waterman score: 1139; 50.6% identity (74.4% similar) in 356 aa overlap (6-360:373-719) 10 20 30 pF1KE0 MSTIQSETDCYDIIEVLGKGTFGEVAKGWRRSTGE : :. :...: ::.::::.:.: :.:.:.: XP_011 ATATTSTATSKNSGSNSEGDYQLVQHEVLCSMTNTYEVLEFLGRGTFGQVVKCWKRGTNE 350 360 370 380 390 400 40 50 60 70 80 90 pF1KE0 MVAIKILKNDAYRNRIIKNELKLLHCMRGLDPEEAHVIRFLEFFHDALKFYLVFELLEQN .:::::::: : . :...: . . .. . .: : :. . ::::.:::: XP_011 IVAIKILKNHPSYARQGQIEVSILARLSTESADDYNFVRAYECFQHKNHTCLVFEMLEQN 410 420 430 440 450 460 100 110 120 130 140 150 pF1KE0 LFEFQKENNFAPLPARHIRTVTLQVLTALARLKELAIIHADLKPENIMLVDQTRCPFRVK :..: :.:.:.::: ..:: : :: ::: .:: :..:::::::::::::: .: :.::: XP_011 LYDFLKQNKFSPLPLKYIRPVLQQVATALMKLKSLGLIHADLKPENIMLVDPSRQPYRVK 470 480 490 500 510 520 160 170 180 190 200 210 pF1KE0 VIDFGSASIFSEVRYVKEPYIQSRFYRAPEILLGLPFCEKVDVWSLGCVMAELHLGWPLY :::::::: :.. : :.:::.::::::.::::::: .:.::::::.::: :::::: XP_011 VIDFGSASHVSKA--VCSTYLQSRYYRAPEIILGLPFCEAIDMWSLGCVIAELFLGWPLY 530 540 550 560 570 580 220 230 240 250 260 270 pF1KE0 PGNNEYDQVRYICETQGLPKPHLLHAACKAHHFFKRNPHPDAANP-WQLKSSADYLAETK :: .::::.::: .::::: .:: :. :. .::.:. :. : :.::. :. ::: XP_011 PGASEYDQIRYISQTQGLPAEYLLSAGTKTTRFFNRDT--DSPYPLWRLKTPDDHEAETG 590 600 610 620 630 280 290 300 310 320 330 pF1KE0 VRPLERRKYMLKSLDQIETVNGGSVASRLTFPDREALAEHADLKSMVELIKRMLTWESHE .. : :::... ::.. :: ... : : :.:.:: . ...:.:.::: .. . XP_011 IKSKEARKYIFNCLDDMAQVN---MTTDLEGSD--MLVEKADRREFIDLLKKMLTIDADK 640 650 660 670 680 690 340 350 360 370 380 390 pF1KE0 RISPSAALRHPFVSMQQLRSAHETTHYYQLSLRSYRLSLQVEGKPPTPVVAAEDGTPYYC ::.: .: ::::.: .: . ..:: XP_011 RITPIETLNHPFVTMTHLLDFPHSTHVKSCFQNMEICKRRVNMYDTVNQSKTPFITHVAP 700 710 720 730 740 750 616 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 16:36:31 2016 done: Mon Nov 7 16:36:33 2016 Total Scan time: 9.590 Total Display time: 0.070 Function used was FASTA [36.3.4 Apr, 2011]