FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4170, 621 aa 1>>>pF1KE4170 621 - 621 aa - 621 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.6897+/-0.000439; mu= 17.2980+/- 0.027 mean_var=87.2686+/-18.480, 0's: 0 Z-trim(111.4): 113 B-trim: 1329 in 2/47 Lambda= 0.137292 statistics sampled from 19902 (20023) to 19902 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.6), E-opt: 0.2 (0.235), width: 16 Scan time: 9.990 The best scores are: opt bits E(85289) NP_036292 (OMIM: 605654,615471) F-box/LRR-repeat p ( 621) 4209 844.5 0 NP_001265645 (OMIM: 605654,615471) F-box/LRR-repea ( 621) 4209 844.5 0 XP_016866215 (OMIM: 605654,615471) PREDICTED: F-bo ( 621) 4209 844.5 0 XP_016866216 (OMIM: 605654,615471) PREDICTED: F-bo ( 597) 3078 620.5 5.3e-177 XP_005266987 (OMIM: 605654,615471) PREDICTED: F-bo ( 597) 3078 620.5 5.3e-177 XP_016866217 (OMIM: 605654,615471) PREDICTED: F-bo ( 379) 2576 520.9 3.2e-147 XP_011534050 (OMIM: 605654,615471) PREDICTED: F-bo ( 381) 2519 509.6 8e-144 XP_016861583 (OMIM: 605652) PREDICTED: F-box/LRR-r ( 318) 356 81.1 6.5e-15 XP_005265074 (OMIM: 605652) PREDICTED: F-box/LRR-r ( 318) 356 81.1 6.5e-15 XP_016861582 (OMIM: 605652) PREDICTED: F-box/LRR-r ( 349) 354 80.7 9.1e-15 XP_011531861 (OMIM: 605652) PREDICTED: F-box/LRR-r ( 349) 354 80.7 9.1e-15 XP_005265072 (OMIM: 605652) PREDICTED: F-box/LRR-r ( 349) 354 80.7 9.1e-15 XP_016861581 (OMIM: 605652) PREDICTED: F-box/LRR-r ( 349) 354 80.7 9.1e-15 XP_005265073 (OMIM: 605652) PREDICTED: F-box/LRR-r ( 349) 354 80.7 9.1e-15 NP_001171835 (OMIM: 609086) F-box/LRR-repeat prote ( 404) 342 78.4 5.3e-14 XP_005257804 (OMIM: 609086) PREDICTED: F-box/LRR-r ( 441) 342 78.4 5.7e-14 XP_011512300 (OMIM: 605656) PREDICTED: F-box/LRR-r ( 444) 315 73.1 2.3e-12 NP_001265246 (OMIM: 605656) F-box/LRR-repeat prote ( 444) 315 73.1 2.3e-12 XP_016864751 (OMIM: 605656) PREDICTED: F-box/LRR-r ( 486) 315 73.1 2.5e-12 NP_036436 (OMIM: 605656) F-box/LRR-repeat protein ( 491) 315 73.1 2.5e-12 NP_116264 (OMIM: 609086) F-box/LRR-repeat protein ( 436) 273 64.8 7.4e-10 XP_005257803 (OMIM: 609086) PREDICTED: F-box/LRR-r ( 473) 273 64.8 7.8e-10 XP_006715961 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 584) 246 59.5 3.8e-08 XP_011514234 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 639) 246 59.5 4e-08 NP_001104508 (OMIM: 609080) F-box/LRR-repeat prote ( 690) 246 59.6 4.3e-08 NP_001274079 (OMIM: 609080) F-box/LRR-repeat prote ( 707) 246 59.6 4.4e-08 XP_011514232 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 735) 246 59.6 4.5e-08 NP_659469 (OMIM: 609080) F-box/LRR-repeat protein ( 735) 246 59.6 4.5e-08 XP_005250266 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 735) 246 59.6 4.5e-08 XP_016867342 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 735) 246 59.6 4.5e-08 XP_005250265 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 780) 246 59.6 4.7e-08 XP_016867341 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 780) 246 59.6 4.7e-08 XP_011514231 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 783) 246 59.6 4.7e-08 XP_011514230 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 797) 246 59.6 4.8e-08 XP_016867340 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 809) 246 59.6 4.9e-08 XP_016867339 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 822) 246 59.6 4.9e-08 XP_005250262 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 825) 246 59.6 4.9e-08 NP_036289 (OMIM: 605652) F-box/LRR-repeat protein ( 423) 242 58.6 5.1e-08 XP_005265071 (OMIM: 605652) PREDICTED: F-box/LRR-r ( 454) 242 58.6 5.4e-08 XP_016874365 (OMIM: 609081) PREDICTED: F-box/LRR-r ( 387) 235 57.2 1.2e-07 XP_016874364 (OMIM: 609081) PREDICTED: F-box/LRR-r ( 404) 235 57.2 1.3e-07 NP_689654 (OMIM: 609081) F-box/LRR-repeat protein ( 418) 235 57.2 1.3e-07 XP_005250264 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 792) 235 57.4 2.2e-07 XP_016865218 (OMIM: 609083) PREDICTED: F-box/LRR-r ( 567) 212 52.8 3.9e-06 NP_005974 (OMIM: 601436) S-phase kinase-associated ( 424) 203 50.9 1.1e-05 XP_011512385 (OMIM: 601436) PREDICTED: S-phase kin ( 255) 199 49.9 1.2e-05 XP_011541880 (OMIM: 609083) PREDICTED: F-box/LRR-r ( 582) 199 50.2 2.4e-05 XP_011541879 (OMIM: 609083) PREDICTED: F-box/LRR-r ( 589) 199 50.2 2.4e-05 XP_011541878 (OMIM: 609083) PREDICTED: F-box/LRR-r ( 610) 199 50.2 2.5e-05 XP_011541877 (OMIM: 609083) PREDICTED: F-box/LRR-r ( 618) 199 50.2 2.5e-05 >>NP_036292 (OMIM: 605654,615471) F-box/LRR-repeat prote (621 aa) initn: 4209 init1: 4209 opt: 4209 Z-score: 4509.2 bits: 844.5 E(85289): 0 Smith-Waterman score: 4209; 100.0% identity (100.0% similar) in 621 aa overlap (1-621:1-621) 10 20 30 40 50 60 pF1KE4 MSPVFPMLTVLTMFYYICLRRRARTATRGEMMNTHRAIESNSQTSPLNAEVVQYAKEVVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 MSPVFPMLTVLTMFYYICLRRRARTATRGEMMNTHRAIESNSQTSPLNAEVVQYAKEVVD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 FSSHYGSENSMSYTMWNLAGVPNVFPSSGDFTQTAVFRTYGTWWDQCPSASLPFKRTPPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 FSSHYGSENSMSYTMWNLAGVPNVFPSSGDFTQTAVFRTYGTWWDQCPSASLPFKRTPPN 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 FQSQDYVELTFEQQVYPTAVHVLETYHPGAVIRILACSANPYSPNPPAEVRWEILWSERP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 FQSQDYVELTFEQQVYPTAVHVLETYHPGAVIRILACSANPYSPNPPAEVRWEILWSERP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 TKVNASQARQFKPCIKQINFPTNLIRLEVNSSLLEYYTELDAVVLHGVKDKPVLSLKTSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 TKVNASQARQFKPCIKQINFPTNLIRLEVNSSLLEYYTELDAVVLHGVKDKPVLSLKTSL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 IDMNDIEDDAYAEKDGCGMDSLNKKFSSAVLGEGPNNGYFDKLPYELIQLILNHLTLPDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 IDMNDIEDDAYAEKDGCGMDSLNKKFSSAVLGEGPNNGYFDKLPYELIQLILNHLTLPDL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 CRLAQTCKLLSQHCCDPLQYIHLNLQPYWAKLDDTSLEFLQSRCTLVQWLNLSWTGNRGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 CRLAQTCKLLSQHCCDPLQYIHLNLQPYWAKLDDTSLEFLQSRCTLVQWLNLSWTGNRGF 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 ISVAGFSRFLKVCGSELVRLELSCSHFLNETCLEVISEMCPNLQALNLSSCDKLPPQAFN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 ISVAGFSRFLKVCGSELVRLELSCSHFLNETCLEVISEMCPNLQALNLSSCDKLPPQAFN 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE4 HIAKLCSLKRLVLYRTKVEQTALLSILNFCSELQHLSLGSCVMIEDYDVIASMIGAKCKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 HIAKLCSLKRLVLYRTKVEQTALLSILNFCSELQHLSLGSCVMIEDYDVIASMIGAKCKK 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE4 LRTLDLWRCKNITENGIAELASGCPLLEELDLGWCPTLQSSTGCFTRLAHQLPNLQKLFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 LRTLDLWRCKNITENGIAELASGCPLLEELDLGWCPTLQSSTGCFTRLAHQLPNLQKLFL 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE4 TANRSVCDTDIDELACNCTRLQQLDILGTRMVSPASLRKLLESCKDLSLLDVSFCSQIDN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 TANRSVCDTDIDELACNCTRLQQLDILGTRMVSPASLRKLLESCKDLSLLDVSFCSQIDN 550 560 570 580 590 600 610 620 pF1KE4 RAVLELNASFPKVFIKKSFTQ ::::::::::::::::::::: NP_036 RAVLELNASFPKVFIKKSFTQ 610 620 >>NP_001265645 (OMIM: 605654,615471) F-box/LRR-repeat pr (621 aa) initn: 4209 init1: 4209 opt: 4209 Z-score: 4509.2 bits: 844.5 E(85289): 0 Smith-Waterman score: 4209; 100.0% identity (100.0% similar) in 621 aa overlap (1-621:1-621) 10 20 30 40 50 60 pF1KE4 MSPVFPMLTVLTMFYYICLRRRARTATRGEMMNTHRAIESNSQTSPLNAEVVQYAKEVVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MSPVFPMLTVLTMFYYICLRRRARTATRGEMMNTHRAIESNSQTSPLNAEVVQYAKEVVD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 FSSHYGSENSMSYTMWNLAGVPNVFPSSGDFTQTAVFRTYGTWWDQCPSASLPFKRTPPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 FSSHYGSENSMSYTMWNLAGVPNVFPSSGDFTQTAVFRTYGTWWDQCPSASLPFKRTPPN 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 FQSQDYVELTFEQQVYPTAVHVLETYHPGAVIRILACSANPYSPNPPAEVRWEILWSERP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 FQSQDYVELTFEQQVYPTAVHVLETYHPGAVIRILACSANPYSPNPPAEVRWEILWSERP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 TKVNASQARQFKPCIKQINFPTNLIRLEVNSSLLEYYTELDAVVLHGVKDKPVLSLKTSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TKVNASQARQFKPCIKQINFPTNLIRLEVNSSLLEYYTELDAVVLHGVKDKPVLSLKTSL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 IDMNDIEDDAYAEKDGCGMDSLNKKFSSAVLGEGPNNGYFDKLPYELIQLILNHLTLPDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 IDMNDIEDDAYAEKDGCGMDSLNKKFSSAVLGEGPNNGYFDKLPYELIQLILNHLTLPDL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 CRLAQTCKLLSQHCCDPLQYIHLNLQPYWAKLDDTSLEFLQSRCTLVQWLNLSWTGNRGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 CRLAQTCKLLSQHCCDPLQYIHLNLQPYWAKLDDTSLEFLQSRCTLVQWLNLSWTGNRGF 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 ISVAGFSRFLKVCGSELVRLELSCSHFLNETCLEVISEMCPNLQALNLSSCDKLPPQAFN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ISVAGFSRFLKVCGSELVRLELSCSHFLNETCLEVISEMCPNLQALNLSSCDKLPPQAFN 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE4 HIAKLCSLKRLVLYRTKVEQTALLSILNFCSELQHLSLGSCVMIEDYDVIASMIGAKCKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 HIAKLCSLKRLVLYRTKVEQTALLSILNFCSELQHLSLGSCVMIEDYDVIASMIGAKCKK 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE4 LRTLDLWRCKNITENGIAELASGCPLLEELDLGWCPTLQSSTGCFTRLAHQLPNLQKLFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LRTLDLWRCKNITENGIAELASGCPLLEELDLGWCPTLQSSTGCFTRLAHQLPNLQKLFL 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE4 TANRSVCDTDIDELACNCTRLQQLDILGTRMVSPASLRKLLESCKDLSLLDVSFCSQIDN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TANRSVCDTDIDELACNCTRLQQLDILGTRMVSPASLRKLLESCKDLSLLDVSFCSQIDN 550 560 570 580 590 600 610 620 pF1KE4 RAVLELNASFPKVFIKKSFTQ ::::::::::::::::::::: NP_001 RAVLELNASFPKVFIKKSFTQ 610 620 >>XP_016866215 (OMIM: 605654,615471) PREDICTED: F-box/LR (621 aa) initn: 4209 init1: 4209 opt: 4209 Z-score: 4509.2 bits: 844.5 E(85289): 0 Smith-Waterman score: 4209; 100.0% identity (100.0% similar) in 621 aa overlap (1-621:1-621) 10 20 30 40 50 60 pF1KE4 MSPVFPMLTVLTMFYYICLRRRARTATRGEMMNTHRAIESNSQTSPLNAEVVQYAKEVVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MSPVFPMLTVLTMFYYICLRRRARTATRGEMMNTHRAIESNSQTSPLNAEVVQYAKEVVD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 FSSHYGSENSMSYTMWNLAGVPNVFPSSGDFTQTAVFRTYGTWWDQCPSASLPFKRTPPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 FSSHYGSENSMSYTMWNLAGVPNVFPSSGDFTQTAVFRTYGTWWDQCPSASLPFKRTPPN 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 FQSQDYVELTFEQQVYPTAVHVLETYHPGAVIRILACSANPYSPNPPAEVRWEILWSERP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 FQSQDYVELTFEQQVYPTAVHVLETYHPGAVIRILACSANPYSPNPPAEVRWEILWSERP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 TKVNASQARQFKPCIKQINFPTNLIRLEVNSSLLEYYTELDAVVLHGVKDKPVLSLKTSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TKVNASQARQFKPCIKQINFPTNLIRLEVNSSLLEYYTELDAVVLHGVKDKPVLSLKTSL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 IDMNDIEDDAYAEKDGCGMDSLNKKFSSAVLGEGPNNGYFDKLPYELIQLILNHLTLPDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 IDMNDIEDDAYAEKDGCGMDSLNKKFSSAVLGEGPNNGYFDKLPYELIQLILNHLTLPDL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 CRLAQTCKLLSQHCCDPLQYIHLNLQPYWAKLDDTSLEFLQSRCTLVQWLNLSWTGNRGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 CRLAQTCKLLSQHCCDPLQYIHLNLQPYWAKLDDTSLEFLQSRCTLVQWLNLSWTGNRGF 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 ISVAGFSRFLKVCGSELVRLELSCSHFLNETCLEVISEMCPNLQALNLSSCDKLPPQAFN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ISVAGFSRFLKVCGSELVRLELSCSHFLNETCLEVISEMCPNLQALNLSSCDKLPPQAFN 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE4 HIAKLCSLKRLVLYRTKVEQTALLSILNFCSELQHLSLGSCVMIEDYDVIASMIGAKCKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 HIAKLCSLKRLVLYRTKVEQTALLSILNFCSELQHLSLGSCVMIEDYDVIASMIGAKCKK 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE4 LRTLDLWRCKNITENGIAELASGCPLLEELDLGWCPTLQSSTGCFTRLAHQLPNLQKLFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LRTLDLWRCKNITENGIAELASGCPLLEELDLGWCPTLQSSTGCFTRLAHQLPNLQKLFL 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE4 TANRSVCDTDIDELACNCTRLQQLDILGTRMVSPASLRKLLESCKDLSLLDVSFCSQIDN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TANRSVCDTDIDELACNCTRLQQLDILGTRMVSPASLRKLLESCKDLSLLDVSFCSQIDN 550 560 570 580 590 600 610 620 pF1KE4 RAVLELNASFPKVFIKKSFTQ ::::::::::::::::::::: XP_016 RAVLELNASFPKVFIKKSFTQ 610 620 >>XP_016866216 (OMIM: 605654,615471) PREDICTED: F-box/LR (597 aa) initn: 3046 init1: 2995 opt: 3078 Z-score: 3298.7 bits: 620.5 E(85289): 5.3e-177 Smith-Waterman score: 3995; 96.1% identity (96.1% similar) in 621 aa overlap (1-621:1-597) 10 20 30 40 50 60 pF1KE4 MSPVFPMLTVLTMFYYICLRRRARTATRGEMMNTHRAIESNSQTSPLNAEVVQYAKEVVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MSPVFPMLTVLTMFYYICLRRRARTATRGEMMNTHRAIESNSQTSPLNAEVVQYAKEVVD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 FSSHYGSENSMSYTMWNLAGVPNVFPSSGDFTQTAVFRTYGTWWDQCPSASLPFKRTPPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 FSSHYGSENSMSYTMWNLAGVPNVFPSSGDFTQTAVFRTYGTWWDQCPSASLPFKRTPPN 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 FQSQDYVELTFEQQVYPTAVHVLETYHPGAVIRILACSANPYSPNPPAEVRWEILWSERP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 FQSQDYVELTFEQQVYPTAVHVLETYHPGAVIRILACSANPYSPNPPAEVRWEILWSERP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 TKVNASQARQFKPCIKQINFPTNLIRLEVNSSLLEYYTELDAVVLHGVKDKPVLSLKTSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TKVNASQARQFKPCIKQINFPTNLIRLEVNSSLLEYYTELDAVVLHGVKDKPVLSLKTSL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 IDMNDIEDDAYAEKDGCGMDSLNKKFSSAVLGEGPNNGYFDKLPYELIQLILNHLTLPDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 IDMNDIEDDAYAEKDGCGMDSLNKKFSSAVLGEGPNNGYFDKLPYELIQLILNHLTLPDL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 CRLAQTCKLLSQHCCDPLQYIHLNLQPYWAKLDDTSLEFLQSRCTLVQWLNLSWTGNRGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 CRLAQTCKLLSQHCCDPLQYIHLNLQPYWAKLDDTSLEFLQSRCTLVQWLNLSWTGNRGF 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 ISVAGFSRFLKVCGSELVRLELSCSHFLNETCLEVISEMCPNLQALNLSSCDKLPPQAFN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ISVAGFSRFLKVCGSELVRLELSCSHFLNETCLEVISEMCPNLQALNLSSCDKLPPQAFN 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE4 HIAKLCSLKRLVLYRTKVEQTALLSILNFCSELQHLSLGSCVMIEDYDVIASMIGAKCKK ::::::::::::::::::: ::::::::::::::::: XP_016 HIAKLCSLKRLVLYRTKVE------------------------IEDYDVIASMIGAKCKK 430 440 450 490 500 510 520 530 540 pF1KE4 LRTLDLWRCKNITENGIAELASGCPLLEELDLGWCPTLQSSTGCFTRLAHQLPNLQKLFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LRTLDLWRCKNITENGIAELASGCPLLEELDLGWCPTLQSSTGCFTRLAHQLPNLQKLFL 460 470 480 490 500 510 550 560 570 580 590 600 pF1KE4 TANRSVCDTDIDELACNCTRLQQLDILGTRMVSPASLRKLLESCKDLSLLDVSFCSQIDN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TANRSVCDTDIDELACNCTRLQQLDILGTRMVSPASLRKLLESCKDLSLLDVSFCSQIDN 520 530 540 550 560 570 610 620 pF1KE4 RAVLELNASFPKVFIKKSFTQ ::::::::::::::::::::: XP_016 RAVLELNASFPKVFIKKSFTQ 580 590 >>XP_005266987 (OMIM: 605654,615471) PREDICTED: F-box/LR (597 aa) initn: 3046 init1: 2995 opt: 3078 Z-score: 3298.7 bits: 620.5 E(85289): 5.3e-177 Smith-Waterman score: 3995; 96.1% identity (96.1% similar) in 621 aa overlap (1-621:1-597) 10 20 30 40 50 60 pF1KE4 MSPVFPMLTVLTMFYYICLRRRARTATRGEMMNTHRAIESNSQTSPLNAEVVQYAKEVVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MSPVFPMLTVLTMFYYICLRRRARTATRGEMMNTHRAIESNSQTSPLNAEVVQYAKEVVD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 FSSHYGSENSMSYTMWNLAGVPNVFPSSGDFTQTAVFRTYGTWWDQCPSASLPFKRTPPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 FSSHYGSENSMSYTMWNLAGVPNVFPSSGDFTQTAVFRTYGTWWDQCPSASLPFKRTPPN 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 FQSQDYVELTFEQQVYPTAVHVLETYHPGAVIRILACSANPYSPNPPAEVRWEILWSERP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 FQSQDYVELTFEQQVYPTAVHVLETYHPGAVIRILACSANPYSPNPPAEVRWEILWSERP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 TKVNASQARQFKPCIKQINFPTNLIRLEVNSSLLEYYTELDAVVLHGVKDKPVLSLKTSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 TKVNASQARQFKPCIKQINFPTNLIRLEVNSSLLEYYTELDAVVLHGVKDKPVLSLKTSL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 IDMNDIEDDAYAEKDGCGMDSLNKKFSSAVLGEGPNNGYFDKLPYELIQLILNHLTLPDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 IDMNDIEDDAYAEKDGCGMDSLNKKFSSAVLGEGPNNGYFDKLPYELIQLILNHLTLPDL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 CRLAQTCKLLSQHCCDPLQYIHLNLQPYWAKLDDTSLEFLQSRCTLVQWLNLSWTGNRGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 CRLAQTCKLLSQHCCDPLQYIHLNLQPYWAKLDDTSLEFLQSRCTLVQWLNLSWTGNRGF 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 ISVAGFSRFLKVCGSELVRLELSCSHFLNETCLEVISEMCPNLQALNLSSCDKLPPQAFN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 ISVAGFSRFLKVCGSELVRLELSCSHFLNETCLEVISEMCPNLQALNLSSCDKLPPQAFN 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE4 HIAKLCSLKRLVLYRTKVEQTALLSILNFCSELQHLSLGSCVMIEDYDVIASMIGAKCKK ::::::::::::::::::: ::::::::::::::::: XP_005 HIAKLCSLKRLVLYRTKVE------------------------IEDYDVIASMIGAKCKK 430 440 450 490 500 510 520 530 540 pF1KE4 LRTLDLWRCKNITENGIAELASGCPLLEELDLGWCPTLQSSTGCFTRLAHQLPNLQKLFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 LRTLDLWRCKNITENGIAELASGCPLLEELDLGWCPTLQSSTGCFTRLAHQLPNLQKLFL 460 470 480 490 500 510 550 560 570 580 590 600 pF1KE4 TANRSVCDTDIDELACNCTRLQQLDILGTRMVSPASLRKLLESCKDLSLLDVSFCSQIDN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 TANRSVCDTDIDELACNCTRLQQLDILGTRMVSPASLRKLLESCKDLSLLDVSFCSQIDN 520 530 540 550 560 570 610 620 pF1KE4 RAVLELNASFPKVFIKKSFTQ ::::::::::::::::::::: XP_005 RAVLELNASFPKVFIKKSFTQ 580 590 >>XP_016866217 (OMIM: 605654,615471) PREDICTED: F-box/LR (379 aa) initn: 2576 init1: 2576 opt: 2576 Z-score: 2764.1 bits: 520.9 E(85289): 3.2e-147 Smith-Waterman score: 2576; 100.0% identity (100.0% similar) in 379 aa overlap (243-621:1-379) 220 230 240 250 260 270 pF1KE4 LLEYYTELDAVVLHGVKDKPVLSLKTSLIDMNDIEDDAYAEKDGCGMDSLNKKFSSAVLG :::::::::::::::::::::::::::::: XP_016 MNDIEDDAYAEKDGCGMDSLNKKFSSAVLG 10 20 30 280 290 300 310 320 330 pF1KE4 EGPNNGYFDKLPYELIQLILNHLTLPDLCRLAQTCKLLSQHCCDPLQYIHLNLQPYWAKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 EGPNNGYFDKLPYELIQLILNHLTLPDLCRLAQTCKLLSQHCCDPLQYIHLNLQPYWAKL 40 50 60 70 80 90 340 350 360 370 380 390 pF1KE4 DDTSLEFLQSRCTLVQWLNLSWTGNRGFISVAGFSRFLKVCGSELVRLELSCSHFLNETC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 DDTSLEFLQSRCTLVQWLNLSWTGNRGFISVAGFSRFLKVCGSELVRLELSCSHFLNETC 100 110 120 130 140 150 400 410 420 430 440 450 pF1KE4 LEVISEMCPNLQALNLSSCDKLPPQAFNHIAKLCSLKRLVLYRTKVEQTALLSILNFCSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LEVISEMCPNLQALNLSSCDKLPPQAFNHIAKLCSLKRLVLYRTKVEQTALLSILNFCSE 160 170 180 190 200 210 460 470 480 490 500 510 pF1KE4 LQHLSLGSCVMIEDYDVIASMIGAKCKKLRTLDLWRCKNITENGIAELASGCPLLEELDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LQHLSLGSCVMIEDYDVIASMIGAKCKKLRTLDLWRCKNITENGIAELASGCPLLEELDL 220 230 240 250 260 270 520 530 540 550 560 570 pF1KE4 GWCPTLQSSTGCFTRLAHQLPNLQKLFLTANRSVCDTDIDELACNCTRLQQLDILGTRMV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 GWCPTLQSSTGCFTRLAHQLPNLQKLFLTANRSVCDTDIDELACNCTRLQQLDILGTRMV 280 290 300 310 320 330 580 590 600 610 620 pF1KE4 SPASLRKLLESCKDLSLLDVSFCSQIDNRAVLELNASFPKVFIKKSFTQ ::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SPASLRKLLESCKDLSLLDVSFCSQIDNRAVLELNASFPKVFIKKSFTQ 340 350 360 370 >>XP_011534050 (OMIM: 605654,615471) PREDICTED: F-box/LR (381 aa) initn: 2518 init1: 2518 opt: 2519 Z-score: 2703.1 bits: 509.6 E(85289): 8e-144 Smith-Waterman score: 2519; 99.5% identity (99.5% similar) in 371 aa overlap (1-371:1-371) 10 20 30 40 50 60 pF1KE4 MSPVFPMLTVLTMFYYICLRRRARTATRGEMMNTHRAIESNSQTSPLNAEVVQYAKEVVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MSPVFPMLTVLTMFYYICLRRRARTATRGEMMNTHRAIESNSQTSPLNAEVVQYAKEVVD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 FSSHYGSENSMSYTMWNLAGVPNVFPSSGDFTQTAVFRTYGTWWDQCPSASLPFKRTPPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 FSSHYGSENSMSYTMWNLAGVPNVFPSSGDFTQTAVFRTYGTWWDQCPSASLPFKRTPPN 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 FQSQDYVELTFEQQVYPTAVHVLETYHPGAVIRILACSANPYSPNPPAEVRWEILWSERP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 FQSQDYVELTFEQQVYPTAVHVLETYHPGAVIRILACSANPYSPNPPAEVRWEILWSERP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 TKVNASQARQFKPCIKQINFPTNLIRLEVNSSLLEYYTELDAVVLHGVKDKPVLSLKTSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 TKVNASQARQFKPCIKQINFPTNLIRLEVNSSLLEYYTELDAVVLHGVKDKPVLSLKTSL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 IDMNDIEDDAYAEKDGCGMDSLNKKFSSAVLGEGPNNGYFDKLPYELIQLILNHLTLPDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 IDMNDIEDDAYAEKDGCGMDSLNKKFSSAVLGEGPNNGYFDKLPYELIQLILNHLTLPDL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 CRLAQTCKLLSQHCCDPLQYIHLNLQPYWAKLDDTSLEFLQSRCTLVQWLNLSWTGNRGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 CRLAQTCKLLSQHCCDPLQYIHLNLQPYWAKLDDTSLEFLQSRCTLVQWLNLSWTGNRGF 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 ISVAGFSRFLKVCGSELVRLELSCSHFLNETCLEVISEMCPNLQALNLSSCDKLPPQAFN :::::::: : XP_011 ISVAGFSRTKKELKLMKSVNI 370 380 >>XP_016861583 (OMIM: 605652) PREDICTED: F-box/LRR-repea (318 aa) initn: 248 init1: 124 opt: 356 Z-score: 388.8 bits: 81.1 E(85289): 6.5e-15 Smith-Waterman score: 382; 31.4% identity (59.3% similar) in 290 aa overlap (360-619:14-295) 330 340 350 360 370 380 pF1KE4 AKLDDTSLEFLQSRCTLVQWLNLSWTGNRGFISVAGFSRFLKVCGSELVRLEL-SCSHFL : . ..::: : :.: .:.: :: . XP_016 MDAQKSLTVRLLFFSTCYSLSRF---C-SKLKHLDLTSCVSIT 10 20 30 390 400 410 420 430 440 pF1KE4 NETCLEVISEMCPNLQALNLSSCDKLPPQAFNHIAKLC-SLKRLVLYR-TKVEQTALLSI : . :. ::: : ::. :::: ::.. .... ... : .:: :.: :..:. :: : XP_016 NSS-LKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKHI 40 50 60 70 80 90 450 460 470 480 pF1KE4 LNFCSELQHLSLGSCVMIEDYDVI----------------------ASM--IGAKCKKLR :.: :: :.: :: : : :. ::. .: .: .:. XP_016 QNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQ 100 110 120 130 140 150 490 500 510 520 530 540 pF1KE4 TLDLWRCKNITENGIAELASGCPLLEELDLGWCPTLQSSTGCFTRLAHQLPNLQKLFLTA :. ::...:. :.. :: .: ::..:: : . .:: . .:. . :.:: : :. XP_016 ILEAARCSHLTDAGFTLLARNCHELEKMDLEECILITDST--LIQLSIHCPKLQALSLSH 160 170 180 190 200 210 550 560 570 580 590 pF1KE4 NRSVCDTDIDELA---CNCTRLQQLDILGTRMVSPASLRKLLESCKDLSLLDVSFCSQID . . : : .:. :. ::. :.. . ... ..:..: :.:. : :.. :.:. XP_016 CELITDDGILHLSNSTCGHERLRVLELDNCLLITDVALEHL-ENCRGLERLELYDCQQVT 220 230 240 250 260 270 600 610 620 pF1KE4 NRAVLELNASFPKVFIKKSFTQ .. .. :..:.: .. : XP_016 RAGIKRMRAQLPHVKVHAYFAPVTPPTAVAGSGQRLCRCCVIL 280 290 300 310 >>XP_005265074 (OMIM: 605652) PREDICTED: F-box/LRR-repea (318 aa) initn: 248 init1: 124 opt: 356 Z-score: 388.8 bits: 81.1 E(85289): 6.5e-15 Smith-Waterman score: 382; 31.4% identity (59.3% similar) in 290 aa overlap (360-619:14-295) 330 340 350 360 370 380 pF1KE4 AKLDDTSLEFLQSRCTLVQWLNLSWTGNRGFISVAGFSRFLKVCGSELVRLEL-SCSHFL : . ..::: : :.: .:.: :: . XP_005 MDAQKSLTVRLLFFSTCYSLSRF---C-SKLKHLDLTSCVSIT 10 20 30 390 400 410 420 430 440 pF1KE4 NETCLEVISEMCPNLQALNLSSCDKLPPQAFNHIAKLC-SLKRLVLYR-TKVEQTALLSI : . :. ::: : ::. :::: ::.. .... ... : .:: :.: :..:. :: : XP_005 NSS-LKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKHI 40 50 60 70 80 90 450 460 470 480 pF1KE4 LNFCSELQHLSLGSCVMIEDYDVI----------------------ASM--IGAKCKKLR :.: :: :.: :: : : :. ::. .: .: .:. XP_005 QNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQ 100 110 120 130 140 150 490 500 510 520 530 540 pF1KE4 TLDLWRCKNITENGIAELASGCPLLEELDLGWCPTLQSSTGCFTRLAHQLPNLQKLFLTA :. ::...:. :.. :: .: ::..:: : . .:: . .:. . :.:: : :. XP_005 ILEAARCSHLTDAGFTLLARNCHELEKMDLEECILITDST--LIQLSIHCPKLQALSLSH 160 170 180 190 200 210 550 560 570 580 590 pF1KE4 NRSVCDTDIDELA---CNCTRLQQLDILGTRMVSPASLRKLLESCKDLSLLDVSFCSQID . . : : .:. :. ::. :.. . ... ..:..: :.:. : :.. :.:. XP_005 CELITDDGILHLSNSTCGHERLRVLELDNCLLITDVALEHL-ENCRGLERLELYDCQQVT 220 230 240 250 260 270 600 610 620 pF1KE4 NRAVLELNASFPKVFIKKSFTQ .. .. :..:.: .. : XP_005 RAGIKRMRAQLPHVKVHAYFAPVTPPTAVAGSGQRLCRCCVIL 280 290 300 310 >>XP_016861582 (OMIM: 605652) PREDICTED: F-box/LRR-repea (349 aa) initn: 248 init1: 124 opt: 354 Z-score: 386.1 bits: 80.7 E(85289): 9.1e-15 Smith-Waterman score: 354; 34.2% identity (60.1% similar) in 263 aa overlap (360-609:14-262) 330 340 350 360 370 380 pF1KE4 AKLDDTSLEFLQSRCTLVQWLNLSWTGNRGFISVAGFSRFLKVCGSELVRLEL-SCSHFL : . ..::: : :.: .:.: :: . XP_016 MDAQKSLTVRLLFFSTCYSLSRF---C-SKLKHLDLTSCVSIT 10 20 30 390 400 410 420 430 440 pF1KE4 NETCLEVISEMCPNLQALNLSSCDKLPPQAFNHIAKLC-SLKRLVLYR-TKVEQTALLSI : . :. ::: : ::. :::: ::.. .... ... : .:: :.: :..:. :: : XP_016 N-SSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKHI 40 50 60 70 80 90 450 460 470 480 490 500 pF1KE4 LNFCSELQHLSLGSCVMIEDYDVIASMIGAKCKKLRTLDLWRCKNITENGIAELASGCPL :.: :: :.: :: : : :. .: :..:..: : :.:.:. ... :. .:: XP_016 QNYCHELVSLNLQSCSRITDEGVV--QICRGCHRLQALCLSGCSNLTDASLTALGLNCPR 100 110 120 130 140 150 510 520 530 540 550 560 pF1KE4 LEELDLGWCPTLQSSTGCFTRLAHQLPNLQKLFLTANRSVCDTDIDELACNCTRLQQL-- :. :. . : : ...: :: ::.. .:.:. : . :. . .:. .: .:: : XP_016 LQILEAARCSHL-TDAG-FTLLARNCHELEKMDLEECILITDSTLIQLSIHCPKLQALVS 160 170 180 190 200 210 570 580 590 600 610 pF1KE4 ----DILGT-RMVSPASLRKLLES---CKDLSLLDVSFCSQIDNRAVLELNASFPKVFIK ::. .: :. : : . ::.:: : : . ..:.:. : XP_016 LSFSDIIHLLKMKEPSHHNKKLFGFSFCKSLS-----HCELITDDGILHLSNSTCGHERL 220 230 240 250 260 620 pF1KE4 KSFTQ XP_016 RVLELDNCLLITDVALEHLENCRGLERLELYDCQQVTRAGIKRMRAQLPHVKVHAYFAPV 270 280 290 300 310 320 621 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 16:33:53 2016 done: Mon Nov 7 16:33:54 2016 Total Scan time: 9.990 Total Display time: 0.100 Function used was FASTA [36.3.4 Apr, 2011]