FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4170, 621 aa 1>>>pF1KE4170 621 - 621 aa - 621 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.1527+/-0.00106; mu= 14.6600+/- 0.063 mean_var=85.3849+/-17.363, 0's: 0 Z-trim(104.6): 49 B-trim: 0 in 0/49 Lambda= 0.138798 statistics sampled from 7935 (7973) to 7935 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.616), E-opt: 0.2 (0.245), width: 16 Scan time: 3.440 The best scores are: opt bits E(32554) CCDS5041.1 FBXL4 gene_id:26235|Hs108|chr6 ( 621) 4209 853.4 0 CCDS54116.1 FBXL20 gene_id:84961|Hs108|chr17 ( 404) 342 79.0 1.4e-14 CCDS64129.1 FBXL7 gene_id:23194|Hs108|chr5 ( 444) 315 73.6 6.4e-13 CCDS54833.1 FBXL7 gene_id:23194|Hs108|chr5 ( 491) 315 73.6 7e-13 >>CCDS5041.1 FBXL4 gene_id:26235|Hs108|chr6 (621 aa) initn: 4209 init1: 4209 opt: 4209 Z-score: 4557.3 bits: 853.4 E(32554): 0 Smith-Waterman score: 4209; 100.0% identity (100.0% similar) in 621 aa overlap (1-621:1-621) 10 20 30 40 50 60 pF1KE4 MSPVFPMLTVLTMFYYICLRRRARTATRGEMMNTHRAIESNSQTSPLNAEVVQYAKEVVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS50 MSPVFPMLTVLTMFYYICLRRRARTATRGEMMNTHRAIESNSQTSPLNAEVVQYAKEVVD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 FSSHYGSENSMSYTMWNLAGVPNVFPSSGDFTQTAVFRTYGTWWDQCPSASLPFKRTPPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS50 FSSHYGSENSMSYTMWNLAGVPNVFPSSGDFTQTAVFRTYGTWWDQCPSASLPFKRTPPN 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 FQSQDYVELTFEQQVYPTAVHVLETYHPGAVIRILACSANPYSPNPPAEVRWEILWSERP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS50 FQSQDYVELTFEQQVYPTAVHVLETYHPGAVIRILACSANPYSPNPPAEVRWEILWSERP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 TKVNASQARQFKPCIKQINFPTNLIRLEVNSSLLEYYTELDAVVLHGVKDKPVLSLKTSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS50 TKVNASQARQFKPCIKQINFPTNLIRLEVNSSLLEYYTELDAVVLHGVKDKPVLSLKTSL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 IDMNDIEDDAYAEKDGCGMDSLNKKFSSAVLGEGPNNGYFDKLPYELIQLILNHLTLPDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS50 IDMNDIEDDAYAEKDGCGMDSLNKKFSSAVLGEGPNNGYFDKLPYELIQLILNHLTLPDL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 CRLAQTCKLLSQHCCDPLQYIHLNLQPYWAKLDDTSLEFLQSRCTLVQWLNLSWTGNRGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS50 CRLAQTCKLLSQHCCDPLQYIHLNLQPYWAKLDDTSLEFLQSRCTLVQWLNLSWTGNRGF 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 ISVAGFSRFLKVCGSELVRLELSCSHFLNETCLEVISEMCPNLQALNLSSCDKLPPQAFN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS50 ISVAGFSRFLKVCGSELVRLELSCSHFLNETCLEVISEMCPNLQALNLSSCDKLPPQAFN 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE4 HIAKLCSLKRLVLYRTKVEQTALLSILNFCSELQHLSLGSCVMIEDYDVIASMIGAKCKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS50 HIAKLCSLKRLVLYRTKVEQTALLSILNFCSELQHLSLGSCVMIEDYDVIASMIGAKCKK 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE4 LRTLDLWRCKNITENGIAELASGCPLLEELDLGWCPTLQSSTGCFTRLAHQLPNLQKLFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS50 LRTLDLWRCKNITENGIAELASGCPLLEELDLGWCPTLQSSTGCFTRLAHQLPNLQKLFL 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE4 TANRSVCDTDIDELACNCTRLQQLDILGTRMVSPASLRKLLESCKDLSLLDVSFCSQIDN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS50 TANRSVCDTDIDELACNCTRLQQLDILGTRMVSPASLRKLLESCKDLSLLDVSFCSQIDN 550 560 570 580 590 600 610 620 pF1KE4 RAVLELNASFPKVFIKKSFTQ ::::::::::::::::::::: CCDS50 RAVLELNASFPKVFIKKSFTQ 610 620 >>CCDS54116.1 FBXL20 gene_id:84961|Hs108|chr17 (404 aa) initn: 401 init1: 143 opt: 342 Z-score: 375.3 bits: 79.0 E(32554): 1.4e-14 Smith-Waterman score: 392; 27.0% identity (56.6% similar) in 371 aa overlap (282-619:27-381) 260 270 280 290 300 310 pF1KE4 AEKDGCGMDSLNKKFSSAVLGEGPNNGYFDKLPYELIQLILNHLTLPDLCRLAQTCKLLS ::: ::. :.. : . ::: ::. . . CCDS54 MRRDVNGVTKSRFEMFSNSDEAVINKKLPKELLLRIFSFLDVVTLCRCAQVSRAWN 10 20 30 40 50 320 330 340 350 360 pF1KE4 QHCCDPLQYIHLNLQPYWAKLDDTSLEFLQSRCT-LVQWLNLSWTGNRGFISVA--GFSR : .. ...: . .. .: ...:: ... :.: :: ..:. .. CCDS54 VLALDGSNWQRIDLFDFQRDIEGRVVENISKRCGGFLRKLSL-----RGCLGVGDNALRT 60 70 80 90 100 110 370 380 390 400 410 420 pF1KE4 FLKVCGS-ELVRLELSCSHFLNETCLEVISEMCPNLQALNLSSCDKLPPQAFNHIAKLCS : . : . :.. :. .:.. . .: :: :. ::.: ::.. .... ... :. CCDS54 FAQNCRNIEVLNLN-GCTKTTD-------AEGCPLLEQLNISWCDQVTKDGIQALVRGCG 120 130 140 150 160 430 440 450 460 pF1KE4 -LKRLVLYR-TKVEQTALLSILNFCSELQHLSLGSCVMIEDY------------------ :: : : :..:. :: : : :: :.: .:..: : CCDS54 GLKALFLKGCTQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCAS 170 180 190 200 210 220 470 480 490 500 510 520 pF1KE4 ------DVIASMIGAKCKKLRTLDLWRCKNITENGIAELASGCPLLEELDLGWCPTLQSS :.: . .: .: .:: :.. ::...:. :.. :: .: ::..:: : . .: CCDS54 GCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLARNCHELEKMDLEECVQITDS 230 240 250 260 270 280 530 540 550 560 570 pF1KE4 TGCFTRLAHQLPNLQKLFLTANRSVCDTDIDEL---ACNCTRLQQLDILGTRMVSPASLR : . .:. . : :: : :. . . : : .: :: .:. ... . ... :::. CCDS54 T--LIQLSIHCPRLQVLSLSHCELITDDGIRHLGNGACAHDQLEVIELDNCPLITDASLE 290 300 310 320 330 340 580 590 600 610 620 pF1KE4 KLLESCKDLSLLDVSFCSQIDNRAVLELNASFPKVFIKKSFTQ .: .::..: ... :.:: .. .: . .:.. .. : CCDS54 HL-KSCHSLERIELYDCQQITRAGIKRLRTHLPNIKVHAYFAPVTPPPSVGGSRQRFCRC 350 360 370 380 390 400 CCDS54 CIIL >>CCDS64129.1 FBXL7 gene_id:23194|Hs108|chr5 (444 aa) initn: 415 init1: 141 opt: 315 Z-score: 345.4 bits: 73.6 E(32554): 6.4e-13 Smith-Waterman score: 345; 26.4% identity (56.5% similar) in 345 aa overlap (281-603:68-399) 260 270 280 290 300 310 pF1KE4 YAEKDGCGMDSLNKKFSSAVLGEGPNNGYFDKLPYELIQLILNHLTLPDLCRLAQTCKLL :.:: . . :.. : .::: :..:. CCDS64 VAMVHSPPPTRLTHPLIRLASRPQKEQASIDRLPDHSMVQIFSFLPTNQLCRCARVCRRW 40 50 60 70 80 90 320 330 340 350 pF1KE4 SQHCCDPLQYIHLNLQPYWAKLDDTSLEFLQSR--------CTLVQWLNLSWT---GNRG . :: . . : ..: .:. : : : ... ...: .:: CCDS64 YNLAWDPRLWRTIRLTGETINVD-RALKVLTRRLCQDTPNVCLMLETVTVSGCRRLTDRG 100 110 120 130 140 150 360 370 380 390 400 410 pF1KE4 FISVAGFSRFLKVCGSELVRLELS-CSHFLNETCLEVISEMCPNLQALNLSSCDKLPPQA . ..: : :: :::.: : .. ::. ..:.: .::::. :..:.:.:. . CCDS64 LYTIAQ-------CCPELRRLEVSGCYNISNEAVFDVVS-LCPNLEHLDVSGCSKVTCIS 160 170 180 190 200 420 430 440 450 460 pF1KE4 FNHIA---------KLCSLKRLVLYRTKV-EQTALLSILNFCSELQHLSLGSCVMIEDYD ... : : :.. : . : :. .: .: :..: :: : :: . : CCDS64 LTREASIKLSPLHGKQISIRYLDMTDCFVLEDEGLHTIAAHCTQLTHLYLRRCVRLTDEG 210 220 230 240 250 260 470 480 490 500 510 520 pF1KE4 VIASMIGAKCKKLRTLDLWRCKNITENGIAELASGCPLLEELDLGWCPTLQSSTGCFTRL . .: : ... :.. :. ... :. :.:. :. :... : . ...: . . CCDS64 LRYLVI--YCASIKELSVSDCRFVSDFGLREIAKLESRLRYLSIAHCGRV-TDVG-IRYV 270 280 290 300 310 320 530 540 550 560 570 580 pF1KE4 AHQLPNLQKLFLTANRSVCDTDIDELACNCTRLQQLDILGTRMVSPASLRKLLESCKDLS :. .:. : . ... : .. :: :::.:..::: .:: ..:. : .: .:. CCDS64 AKYCSKLRYLNARGCEGITDHGVEYLAKNCTKLKSLDIGKCPLVSDTGLECLALNCFNLK 330 340 350 360 370 380 590 600 610 620 pF1KE4 LLDVSFCSQIDNRAVLELNASFPKVFIKKSFTQ :... : .: .... CCDS64 RLSLKSCESITGQGLQIVAANCFDLQTLNVQDCEVSVEALRFVKRHCKRCVIEHTNPAFF 390 400 410 420 430 440 >>CCDS54833.1 FBXL7 gene_id:23194|Hs108|chr5 (491 aa) initn: 415 init1: 141 opt: 315 Z-score: 344.7 bits: 73.6 E(32554): 7e-13 Smith-Waterman score: 345; 26.4% identity (56.5% similar) in 345 aa overlap (281-603:115-446) 260 270 280 290 300 310 pF1KE4 YAEKDGCGMDSLNKKFSSAVLGEGPNNGYFDKLPYELIQLILNHLTLPDLCRLAQTCKLL :.:: . . :.. : .::: :..:. CCDS54 VAMVHSPPPTRLTHPLIRLASRPQKEQASIDRLPDHSMVQIFSFLPTNQLCRCARVCRRW 90 100 110 120 130 140 320 330 340 350 pF1KE4 SQHCCDPLQYIHLNLQPYWAKLDDTSLEFLQSR--------CTLVQWLNLSWT---GNRG . :: . . : ..: .:. : : : ... ...: .:: CCDS54 YNLAWDPRLWRTIRLTGETINVD-RALKVLTRRLCQDTPNVCLMLETVTVSGCRRLTDRG 150 160 170 180 190 200 360 370 380 390 400 410 pF1KE4 FISVAGFSRFLKVCGSELVRLELS-CSHFLNETCLEVISEMCPNLQALNLSSCDKLPPQA . ..: : :: :::.: : .. ::. ..:.: .::::. :..:.:.:. . CCDS54 LYTIAQ-------CCPELRRLEVSGCYNISNEAVFDVVS-LCPNLEHLDVSGCSKVTCIS 210 220 230 240 250 420 430 440 450 460 pF1KE4 FNHIA---------KLCSLKRLVLYRTKV-EQTALLSILNFCSELQHLSLGSCVMIEDYD ... : : :.. : . : :. .: .: :..: :: : :: . : CCDS54 LTREASIKLSPLHGKQISIRYLDMTDCFVLEDEGLHTIAAHCTQLTHLYLRRCVRLTDEG 260 270 280 290 300 310 470 480 490 500 510 520 pF1KE4 VIASMIGAKCKKLRTLDLWRCKNITENGIAELASGCPLLEELDLGWCPTLQSSTGCFTRL . .: : ... :.. :. ... :. :.:. :. :... : . ...: . . CCDS54 LRYLVI--YCASIKELSVSDCRFVSDFGLREIAKLESRLRYLSIAHCGRV-TDVG-IRYV 320 330 340 350 360 370 530 540 550 560 570 580 pF1KE4 AHQLPNLQKLFLTANRSVCDTDIDELACNCTRLQQLDILGTRMVSPASLRKLLESCKDLS :. .:. : . ... : .. :: :::.:..::: .:: ..:. : .: .:. CCDS54 AKYCSKLRYLNARGCEGITDHGVEYLAKNCTKLKSLDIGKCPLVSDTGLECLALNCFNLK 380 390 400 410 420 430 590 600 610 620 pF1KE4 LLDVSFCSQIDNRAVLELNASFPKVFIKKSFTQ :... : .: .... CCDS54 RLSLKSCESITGQGLQIVAANCFDLQTLNVQDCEVSVEALRFVKRHCKRCVIEHTNPAFF 440 450 460 470 480 490 621 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 16:33:52 2016 done: Mon Nov 7 16:33:52 2016 Total Scan time: 3.440 Total Display time: 0.030 Function used was FASTA [36.3.4 Apr, 2011]