FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4114, 487 aa 1>>>pF1KE4114 487 - 487 aa - 487 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.8708+/-0.000341; mu= 18.1268+/- 0.021 mean_var=181.1409+/-38.663, 0's: 0 Z-trim(120.3): 249 B-trim: 1763 in 1/55 Lambda= 0.095294 statistics sampled from 34967 (35423) to 34967 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.759), E-opt: 0.2 (0.415), width: 16 Scan time: 9.360 The best scores are: opt bits E(85289) NP_001268380 (OMIM: 612548) E3 ubiquitin-protein l ( 487) 3393 478.9 1.4e-134 NP_835226 (OMIM: 612548) E3 ubiquitin-protein liga ( 487) 3393 478.9 1.4e-134 XP_011514091 (OMIM: 612548) PREDICTED: E3 ubiquiti ( 486) 3375 476.5 7.5e-134 NP_001268379 (OMIM: 612548) E3 ubiquitin-protein l ( 486) 3375 476.5 7.5e-134 XP_011514089 (OMIM: 612548) PREDICTED: E3 ubiquiti ( 304) 2011 288.6 1.6e-77 XP_011514090 (OMIM: 612548) PREDICTED: E3 ubiquiti ( 278) 1951 280.3 4.7e-75 NP_944606 (OMIM: 612549) tripartite motif-containi ( 250) 1578 229.0 1.2e-59 NP_001304744 (OMIM: 612550) tripartite motif-conta ( 250) 1568 227.6 3.1e-59 NP_942150 (OMIM: 612550) tripartite motif-containi ( 250) 1568 227.6 3.1e-59 XP_011514489 (OMIM: 612550) PREDICTED: tripartite ( 250) 1568 227.6 3.1e-59 XP_011514491 (OMIM: 612550) PREDICTED: tripartite ( 249) 1550 225.1 1.7e-58 XP_011514492 (OMIM: 612550) PREDICTED: tripartite ( 228) 1217 179.3 1e-44 NP_001008275 (OMIM: 613288) tripartite motif-conta ( 477) 972 146.1 2.1e-34 NP_742013 (OMIM: 605700) E3 ubiquitin-protein liga ( 488) 812 124.1 8.9e-28 XP_016857118 (OMIM: 616755) PREDICTED: E3 ubiquiti ( 555) 789 121.0 8.5e-27 NP_060677 (OMIM: 616755) E3 ubiquitin-protein liga ( 475) 779 119.6 2e-26 NP_892030 (OMIM: 616017) E3 ubiquitin-protein liga ( 500) 759 116.8 1.4e-25 XP_016878743 (OMIM: 613288) PREDICTED: tripartite ( 333) 640 100.2 9.4e-21 NP_741983 (OMIM: 617007) tripartite motif-containi ( 493) 596 94.4 7.8e-19 NP_976038 (OMIM: 609315) tripartite motif-containi ( 511) 564 90.0 1.7e-17 NP_060543 (OMIM: 613184) E3 ubiquitin-protein liga ( 485) 558 89.2 2.9e-17 NP_001317412 (OMIM: 616755) E3 ubiquitin-protein l ( 354) 548 87.6 6.2e-17 NP_542783 (OMIM: 616017) E3 ubiquitin-protein liga ( 341) 538 86.2 1.6e-16 NP_001288073 (OMIM: 616017) E3 ubiquitin-protein l ( 296) 530 85.0 3.1e-16 XP_016857119 (OMIM: 616755) PREDICTED: E3 ubiquiti ( 544) 531 85.5 4e-16 NP_003132 (OMIM: 109092) E3 ubiquitin-protein liga ( 475) 518 83.7 1.3e-15 NP_001288075 (OMIM: 616017) E3 ubiquitin-protein l ( 263) 504 81.4 3.5e-15 NP_001288074 (OMIM: 616017) E3 ubiquitin-protein l ( 279) 504 81.4 3.6e-15 NP_660215 (OMIM: 607868) E3 ubiquitin-protein liga ( 468) 497 80.8 9.4e-15 XP_016857901 (OMIM: 607868) PREDICTED: E3 ubiquiti ( 467) 493 80.2 1.4e-14 NP_291027 (OMIM: 610530) E3 ubiquitin-protein liga ( 630) 481 78.8 5.1e-14 NP_149023 (OMIM: 608487) tripartite motif-containi ( 493) 467 76.7 1.7e-13 XP_005253240 (OMIM: 608487) PREDICTED: tripartite ( 493) 467 76.7 1.7e-13 NP_006769 (OMIM: 605701) tripartite motif-containi ( 481) 460 75.7 3.3e-13 NP_976040 (OMIM: 609315) tripartite motif-containi ( 303) 455 74.7 4e-13 NP_976039 (OMIM: 609315) tripartite motif-containi ( 303) 455 74.7 4e-13 NP_976041 (OMIM: 609315) tripartite motif-containi ( 303) 455 74.7 4e-13 XP_016865392 (OMIM: 609315) PREDICTED: tripartite ( 303) 455 74.7 4e-13 NP_976042 (OMIM: 609315) tripartite motif-containi ( 329) 455 74.8 4.2e-13 NP_067076 (OMIM: 605700) E3 ubiquitin-protein liga ( 518) 457 75.3 4.5e-13 XP_011538873 (OMIM: 111620,111750,609017) PREDICTE ( 468) 452 74.6 6.9e-13 XP_006710376 (OMIM: 111620,111750,609017) PREDICTE ( 475) 450 74.3 8.4e-13 NP_061008 (OMIM: 111620,111750,609017) erythroid m ( 475) 450 74.3 8.4e-13 XP_011538872 (OMIM: 111620,111750,609017) PREDICTE ( 475) 450 74.3 8.4e-13 NP_001017922 (OMIM: 111620,111750,609017) erythroi ( 475) 450 74.3 8.4e-13 XP_011512525 (OMIM: 605701) PREDICTED: tripartite ( 499) 449 74.2 9.5e-13 XP_011512523 (OMIM: 605701) PREDICTED: tripartite ( 499) 449 74.2 9.5e-13 XP_011512524 (OMIM: 605701) PREDICTED: tripartite ( 499) 449 74.2 9.5e-13 XP_006714995 (OMIM: 610530) PREDICTED: E3 ubiquiti ( 520) 445 73.7 1.4e-12 XP_006714992 (OMIM: 610530) PREDICTED: E3 ubiquiti ( 543) 445 73.7 1.5e-12 >>NP_001268380 (OMIM: 612548) E3 ubiquitin-protein ligas (487 aa) initn: 3393 init1: 3393 opt: 3393 Z-score: 2537.4 bits: 478.9 E(85289): 1.4e-134 Smith-Waterman score: 3393; 100.0% identity (100.0% similar) in 487 aa overlap (1-487:1-487) 10 20 30 40 50 60 pF1KE4 MAWQVSLPELEDRLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSCHLDAELRCPVCRQAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MAWQVSLPELEDRLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSCHLDAELRCPVCRQAV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 DGSSSLPNVSLARVIEALRLPGDPEPKVCVHHRNPLSLFCEKDQELICGLCGLLGSHQHH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DGSSSLPNVSLARVIEALRLPGDPEPKVCVHHRNPLSLFCEKDQELICGLCGLLGSHQHH 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 PVTPVSTVYSRMKEELAALISELKQEQKKVDELIAKLVNNRTRIVNESDVFSWVIRREFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PVTPVSTVYSRMKEELAALISELKQEQKKVDELIAKLVNNRTRIVNESDVFSWVIRREFQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 ELHHLVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLEQFGNEDHHKF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ELHHLVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLEQFGNEDHHKF 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 IRKFHSMASRAEMPQARPLEGAFSPISFKPGLHQADIKLTVWKRLFRKVLPAPEPLKLDP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 IRKFHSMASRAEMPQARPLEGAFSPISFKPGLHQADIKLTVWKRLFRKVLPAPEPLKLDP 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 ATAHPLLELSKGNTVVQCGLLAQRRASQPERFDYSTCVLASRGFSCGRHYWEVVVGSKSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ATAHPLLELSKGNTVVQCGLLAQRRASQPERFDYSTCVLASRGFSCGRHYWEVVVGSKSD 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 WRLGVIKGTASRKGKLNRSPEHGVWLIGLKEGRVYEAFACPRVPLPVAGHPHRIGLYLHY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 WRLGVIKGTASRKGKLNRSPEHGVWLIGLKEGRVYEAFACPRVPLPVAGHPHRIGLYLHY 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE4 EQGELTFFDADRPDDLRPLYTFQADFQGKLYPILDTCWHERGSNSLPMVLPPPSGPGPLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 EQGELTFFDADRPDDLRPLYTFQADFQGKLYPILDTCWHERGSNSLPMVLPPPSGPGPLS 430 440 450 460 470 480 pF1KE4 PEQPTKL ::::::: NP_001 PEQPTKL >>NP_835226 (OMIM: 612548) E3 ubiquitin-protein ligase T (487 aa) initn: 3393 init1: 3393 opt: 3393 Z-score: 2537.4 bits: 478.9 E(85289): 1.4e-134 Smith-Waterman score: 3393; 100.0% identity (100.0% similar) in 487 aa overlap (1-487:1-487) 10 20 30 40 50 60 pF1KE4 MAWQVSLPELEDRLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSCHLDAELRCPVCRQAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_835 MAWQVSLPELEDRLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSCHLDAELRCPVCRQAV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 DGSSSLPNVSLARVIEALRLPGDPEPKVCVHHRNPLSLFCEKDQELICGLCGLLGSHQHH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_835 DGSSSLPNVSLARVIEALRLPGDPEPKVCVHHRNPLSLFCEKDQELICGLCGLLGSHQHH 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 PVTPVSTVYSRMKEELAALISELKQEQKKVDELIAKLVNNRTRIVNESDVFSWVIRREFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_835 PVTPVSTVYSRMKEELAALISELKQEQKKVDELIAKLVNNRTRIVNESDVFSWVIRREFQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 ELHHLVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLEQFGNEDHHKF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_835 ELHHLVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLEQFGNEDHHKF 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 IRKFHSMASRAEMPQARPLEGAFSPISFKPGLHQADIKLTVWKRLFRKVLPAPEPLKLDP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_835 IRKFHSMASRAEMPQARPLEGAFSPISFKPGLHQADIKLTVWKRLFRKVLPAPEPLKLDP 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 ATAHPLLELSKGNTVVQCGLLAQRRASQPERFDYSTCVLASRGFSCGRHYWEVVVGSKSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_835 ATAHPLLELSKGNTVVQCGLLAQRRASQPERFDYSTCVLASRGFSCGRHYWEVVVGSKSD 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 WRLGVIKGTASRKGKLNRSPEHGVWLIGLKEGRVYEAFACPRVPLPVAGHPHRIGLYLHY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_835 WRLGVIKGTASRKGKLNRSPEHGVWLIGLKEGRVYEAFACPRVPLPVAGHPHRIGLYLHY 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE4 EQGELTFFDADRPDDLRPLYTFQADFQGKLYPILDTCWHERGSNSLPMVLPPPSGPGPLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_835 EQGELTFFDADRPDDLRPLYTFQADFQGKLYPILDTCWHERGSNSLPMVLPPPSGPGPLS 430 440 450 460 470 480 pF1KE4 PEQPTKL ::::::: NP_835 PEQPTKL >>XP_011514091 (OMIM: 612548) PREDICTED: E3 ubiquitin-pr (486 aa) initn: 1724 init1: 1724 opt: 3375 Z-score: 2524.0 bits: 476.5 E(85289): 7.5e-134 Smith-Waterman score: 3375; 99.8% identity (99.8% similar) in 487 aa overlap (1-487:1-486) 10 20 30 40 50 60 pF1KE4 MAWQVSLPELEDRLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSCHLDAELRCPVCRQAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MAWQVSLPELEDRLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSCHLDAELRCPVCRQAV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 DGSSSLPNVSLARVIEALRLPGDPEPKVCVHHRNPLSLFCEKDQELICGLCGLLGSHQHH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 DGSSSLPNVSLARVIEALRLPGDPEPKVCVHHRNPLSLFCEKDQELICGLCGLLGSHQHH 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 PVTPVSTVYSRMKEELAALISELKQEQKKVDELIAKLVNNRTRIVNESDVFSWVIRREFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 PVTPVSTVYSRMKEELAALISELKQEQKKVDELIAKLVNNRTRIVNESDVFSWVIRREFQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 ELHHLVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLEQFGNEDHHKF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 ELHHLVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLEQFGNEDHHKF 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 IRKFHSMASRAEMPQARPLEGAFSPISFKPGLHQADIKLTVWKRLFRKVLPAPEPLKLDP :: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 IR-FHSMASRAEMPQARPLEGAFSPISFKPGLHQADIKLTVWKRLFRKVLPAPEPLKLDP 250 260 270 280 290 310 320 330 340 350 360 pF1KE4 ATAHPLLELSKGNTVVQCGLLAQRRASQPERFDYSTCVLASRGFSCGRHYWEVVVGSKSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 ATAHPLLELSKGNTVVQCGLLAQRRASQPERFDYSTCVLASRGFSCGRHYWEVVVGSKSD 300 310 320 330 340 350 370 380 390 400 410 420 pF1KE4 WRLGVIKGTASRKGKLNRSPEHGVWLIGLKEGRVYEAFACPRVPLPVAGHPHRIGLYLHY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 WRLGVIKGTASRKGKLNRSPEHGVWLIGLKEGRVYEAFACPRVPLPVAGHPHRIGLYLHY 360 370 380 390 400 410 430 440 450 460 470 480 pF1KE4 EQGELTFFDADRPDDLRPLYTFQADFQGKLYPILDTCWHERGSNSLPMVLPPPSGPGPLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 EQGELTFFDADRPDDLRPLYTFQADFQGKLYPILDTCWHERGSNSLPMVLPPPSGPGPLS 420 430 440 450 460 470 pF1KE4 PEQPTKL ::::::: XP_011 PEQPTKL 480 >>NP_001268379 (OMIM: 612548) E3 ubiquitin-protein ligas (486 aa) initn: 1724 init1: 1724 opt: 3375 Z-score: 2524.0 bits: 476.5 E(85289): 7.5e-134 Smith-Waterman score: 3375; 99.8% identity (99.8% similar) in 487 aa overlap (1-487:1-486) 10 20 30 40 50 60 pF1KE4 MAWQVSLPELEDRLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSCHLDAELRCPVCRQAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MAWQVSLPELEDRLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSCHLDAELRCPVCRQAV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 DGSSSLPNVSLARVIEALRLPGDPEPKVCVHHRNPLSLFCEKDQELICGLCGLLGSHQHH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DGSSSLPNVSLARVIEALRLPGDPEPKVCVHHRNPLSLFCEKDQELICGLCGLLGSHQHH 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 PVTPVSTVYSRMKEELAALISELKQEQKKVDELIAKLVNNRTRIVNESDVFSWVIRREFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PVTPVSTVYSRMKEELAALISELKQEQKKVDELIAKLVNNRTRIVNESDVFSWVIRREFQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 ELHHLVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLEQFGNEDHHKF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ELHHLVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLEQFGNEDHHKF 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 IRKFHSMASRAEMPQARPLEGAFSPISFKPGLHQADIKLTVWKRLFRKVLPAPEPLKLDP :: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 IR-FHSMASRAEMPQARPLEGAFSPISFKPGLHQADIKLTVWKRLFRKVLPAPEPLKLDP 250 260 270 280 290 310 320 330 340 350 360 pF1KE4 ATAHPLLELSKGNTVVQCGLLAQRRASQPERFDYSTCVLASRGFSCGRHYWEVVVGSKSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ATAHPLLELSKGNTVVQCGLLAQRRASQPERFDYSTCVLASRGFSCGRHYWEVVVGSKSD 300 310 320 330 340 350 370 380 390 400 410 420 pF1KE4 WRLGVIKGTASRKGKLNRSPEHGVWLIGLKEGRVYEAFACPRVPLPVAGHPHRIGLYLHY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 WRLGVIKGTASRKGKLNRSPEHGVWLIGLKEGRVYEAFACPRVPLPVAGHPHRIGLYLHY 360 370 380 390 400 410 430 440 450 460 470 480 pF1KE4 EQGELTFFDADRPDDLRPLYTFQADFQGKLYPILDTCWHERGSNSLPMVLPPPSGPGPLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 EQGELTFFDADRPDDLRPLYTFQADFQGKLYPILDTCWHERGSNSLPMVLPPPSGPGPLS 420 430 440 450 460 470 pF1KE4 PEQPTKL ::::::: NP_001 PEQPTKL 480 >>XP_011514089 (OMIM: 612548) PREDICTED: E3 ubiquitin-pr (304 aa) initn: 2042 init1: 2009 opt: 2011 Z-score: 1512.6 bits: 288.6 E(85289): 1.6e-77 Smith-Waterman score: 2011; 97.7% identity (98.7% similar) in 301 aa overlap (1-301:1-300) 10 20 30 40 50 60 pF1KE4 MAWQVSLPELEDRLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSCHLDAELRCPVCRQAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MAWQVSLPELEDRLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSCHLDAELRCPVCRQAV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 DGSSSLPNVSLARVIEALRLPGDPEPKVCVHHRNPLSLFCEKDQELICGLCGLLGSHQHH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 DGSSSLPNVSLARVIEALRLPGDPEPKVCVHHRNPLSLFCEKDQELICGLCGLLGSHQHH 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 PVTPVSTVYSRMKEELAALISELKQEQKKVDELIAKLVNNRTRIVNESDVFSWVIRREFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 PVTPVSTVYSRMKEELAALISELKQEQKKVDELIAKLVNNRTRIVNESDVFSWVIRREFQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 ELHHLVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLEQFGNEDHHKF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 ELHHLVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLEQFGNEDHHKF 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 IRKFHSMASRAEMPQARPLEGAFSPISFKPGLHQADIKLTVWKRLFRKVLPAPEPLKLDP :::::::::::::::::::::::::::::::::::::::::::::::::::. :. : : XP_011 IRKFHSMASRAEMPQARPLEGAFSPISFKPGLHQADIKLTVWKRLFRKVLPGSSPV-LAP 250 260 270 280 290 310 320 330 340 350 360 pF1KE4 ATAHPLLELSKGNTVVQCGLLAQRRASQPERFDYSTCVLASRGFSCGRHYWEVVVGSKSD . XP_011 SRPWG 300 >>XP_011514090 (OMIM: 612548) PREDICTED: E3 ubiquitin-pr (278 aa) initn: 1951 init1: 1951 opt: 1951 Z-score: 1468.4 bits: 280.3 E(85289): 4.7e-75 Smith-Waterman score: 1951; 100.0% identity (100.0% similar) in 278 aa overlap (210-487:1-278) 180 190 200 210 220 230 pF1KE4 QELHHLVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLEQFGNEDHHK :::::::::::::::::::::::::::::: XP_011 MQLEQAQGTRERLAQAECVLEQFGNEDHHK 10 20 30 240 250 260 270 280 290 pF1KE4 FIRKFHSMASRAEMPQARPLEGAFSPISFKPGLHQADIKLTVWKRLFRKVLPAPEPLKLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 FIRKFHSMASRAEMPQARPLEGAFSPISFKPGLHQADIKLTVWKRLFRKVLPAPEPLKLD 40 50 60 70 80 90 300 310 320 330 340 350 pF1KE4 PATAHPLLELSKGNTVVQCGLLAQRRASQPERFDYSTCVLASRGFSCGRHYWEVVVGSKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 PATAHPLLELSKGNTVVQCGLLAQRRASQPERFDYSTCVLASRGFSCGRHYWEVVVGSKS 100 110 120 130 140 150 360 370 380 390 400 410 pF1KE4 DWRLGVIKGTASRKGKLNRSPEHGVWLIGLKEGRVYEAFACPRVPLPVAGHPHRIGLYLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 DWRLGVIKGTASRKGKLNRSPEHGVWLIGLKEGRVYEAFACPRVPLPVAGHPHRIGLYLH 160 170 180 190 200 210 420 430 440 450 460 470 pF1KE4 YEQGELTFFDADRPDDLRPLYTFQADFQGKLYPILDTCWHERGSNSLPMVLPPPSGPGPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 YEQGELTFFDADRPDDLRPLYTFQADFQGKLYPILDTCWHERGSNSLPMVLPPPSGPGPL 220 230 240 250 260 270 480 pF1KE4 SPEQPTKL :::::::: XP_011 SPEQPTKL >>NP_944606 (OMIM: 612549) tripartite motif-containing p (250 aa) initn: 1578 init1: 1578 opt: 1578 Z-score: 1191.8 bits: 229.0 E(85289): 1.2e-59 Smith-Waterman score: 1578; 93.2% identity (96.8% similar) in 250 aa overlap (1-250:1-250) 10 20 30 40 50 60 pF1KE4 MAWQVSLPELEDRLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSCHLDAELRCPVCRQAV ::::::: ::::::::::::::::: :::::::::::::::::: :::...:::.: :.: NP_944 MAWQVSLLELEDRLQCPICLEVFKESLMLQCGHSYCKGCLVSLSYHLDTKVRCPMCWQVV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 DGSSSLPNVSLARVIEALRLPGDPEPKVCVHHRNPLSLFCEKDQELICGLCGLLGSHQHH :::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::: NP_944 DGSSSLPNVSLAWVIEALRLPGDPEPKVCVHHRNPLSLFCEKDQELICGLCGLLGSHQHH 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 PVTPVSTVYSRMKEELAALISELKQEQKKVDELIAKLVNNRTRIVNESDVFSWVIRREFQ :::::::: ::::::::::.::::::::::::::::::.::::::::::::::::::::: NP_944 PVTPVSTVCSRMKEELAALFSELKQEQKKVDELIAKLVKNRTRIVNESDVFSWVIRREFQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 ELHHLVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLEQFGNEDHHKF ::.: :::::::::::::::::::::::::::::::::::::::::::::::::::::.: NP_944 ELRHPVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLEQFGNEDHHEF 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 IRKFHSMASRAEMPQARPLEGAFSPISFKPGLHQADIKLTVWKRLFRKVLPAPEPLKLDP : :::::::: NP_944 IWKFHSMASR 250 >>NP_001304744 (OMIM: 612550) tripartite motif-containin (250 aa) initn: 1568 init1: 1568 opt: 1568 Z-score: 1184.3 bits: 227.6 E(85289): 3.1e-59 Smith-Waterman score: 1568; 92.8% identity (96.4% similar) in 250 aa overlap (1-250:1-250) 10 20 30 40 50 60 pF1KE4 MAWQVSLPELEDRLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSCHLDAELRCPVCRQAV ::::::: :::: :::::::::::: :::::::::::::::::: :::...:::.: :.: NP_001 MAWQVSLLELEDWLQCPICLEVFKESLMLQCGHSYCKGCLVSLSYHLDTKVRCPMCWQVV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 DGSSSLPNVSLARVIEALRLPGDPEPKVCVHHRNPLSLFCEKDQELICGLCGLLGSHQHH :::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DGSSSLPNVSLAWVIEALRLPGDPEPKVCVHHRNPLSLFCEKDQELICGLCGLLGSHQHH 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 PVTPVSTVYSRMKEELAALISELKQEQKKVDELIAKLVNNRTRIVNESDVFSWVIRREFQ :::::::: ::::::::::.::::::::::::::::::.::::::::::::::::::::: NP_001 PVTPVSTVCSRMKEELAALFSELKQEQKKVDELIAKLVKNRTRIVNESDVFSWVIRREFQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 ELHHLVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLEQFGNEDHHKF ::.: :::::::::::::::::::::::::::::::::::::::::::::::::::::.: NP_001 ELRHPVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLEQFGNEDHHEF 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 IRKFHSMASRAEMPQARPLEGAFSPISFKPGLHQADIKLTVWKRLFRKVLPAPEPLKLDP : :::::::: NP_001 IWKFHSMASR 250 >>NP_942150 (OMIM: 612550) tripartite motif-containing p (250 aa) initn: 1568 init1: 1568 opt: 1568 Z-score: 1184.3 bits: 227.6 E(85289): 3.1e-59 Smith-Waterman score: 1568; 92.8% identity (96.4% similar) in 250 aa overlap (1-250:1-250) 10 20 30 40 50 60 pF1KE4 MAWQVSLPELEDRLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSCHLDAELRCPVCRQAV ::::::: :::: :::::::::::: :::::::::::::::::: :::...:::.: :.: NP_942 MAWQVSLLELEDWLQCPICLEVFKESLMLQCGHSYCKGCLVSLSYHLDTKVRCPMCWQVV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 DGSSSLPNVSLARVIEALRLPGDPEPKVCVHHRNPLSLFCEKDQELICGLCGLLGSHQHH :::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::: NP_942 DGSSSLPNVSLAWVIEALRLPGDPEPKVCVHHRNPLSLFCEKDQELICGLCGLLGSHQHH 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 PVTPVSTVYSRMKEELAALISELKQEQKKVDELIAKLVNNRTRIVNESDVFSWVIRREFQ :::::::: ::::::::::.::::::::::::::::::.::::::::::::::::::::: NP_942 PVTPVSTVCSRMKEELAALFSELKQEQKKVDELIAKLVKNRTRIVNESDVFSWVIRREFQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 ELHHLVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLEQFGNEDHHKF ::.: :::::::::::::::::::::::::::::::::::::::::::::::::::::.: NP_942 ELRHPVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLEQFGNEDHHEF 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 IRKFHSMASRAEMPQARPLEGAFSPISFKPGLHQADIKLTVWKRLFRKVLPAPEPLKLDP : :::::::: NP_942 IWKFHSMASR 250 >>XP_011514489 (OMIM: 612550) PREDICTED: tripartite moti (250 aa) initn: 1568 init1: 1568 opt: 1568 Z-score: 1184.3 bits: 227.6 E(85289): 3.1e-59 Smith-Waterman score: 1568; 92.8% identity (96.4% similar) in 250 aa overlap (1-250:1-250) 10 20 30 40 50 60 pF1KE4 MAWQVSLPELEDRLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSCHLDAELRCPVCRQAV ::::::: :::: :::::::::::: :::::::::::::::::: :::...:::.: :.: XP_011 MAWQVSLLELEDWLQCPICLEVFKESLMLQCGHSYCKGCLVSLSYHLDTKVRCPMCWQVV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 DGSSSLPNVSLARVIEALRLPGDPEPKVCVHHRNPLSLFCEKDQELICGLCGLLGSHQHH :::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::: XP_011 DGSSSLPNVSLAWVIEALRLPGDPEPKVCVHHRNPLSLFCEKDQELICGLCGLLGSHQHH 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 PVTPVSTVYSRMKEELAALISELKQEQKKVDELIAKLVNNRTRIVNESDVFSWVIRREFQ :::::::: ::::::::::.::::::::::::::::::.::::::::::::::::::::: XP_011 PVTPVSTVCSRMKEELAALFSELKQEQKKVDELIAKLVKNRTRIVNESDVFSWVIRREFQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 ELHHLVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLEQFGNEDHHKF ::.: :::::::::::::::::::::::::::::::::::::::::::::::::::::.: XP_011 ELRHPVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLEQFGNEDHHEF 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 IRKFHSMASRAEMPQARPLEGAFSPISFKPGLHQADIKLTVWKRLFRKVLPAPEPLKLDP : :::::::: XP_011 IWKFHSMASR 250 487 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 16:33:12 2016 done: Mon Nov 7 16:33:14 2016 Total Scan time: 9.360 Total Display time: 0.030 Function used was FASTA [36.3.4 Apr, 2011]